Protein–RNA interactions for Protein: Q00341

HDLBP, Vigilin, humanhuman

Known RBP Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBPQ00341 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HDLBPQ00341 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HDLBPQ00341 Y_RNA.64-201ENST00000362845 102 ntBASIC3.62□□□□□ -1.83
HDLBPQ00341 AL031121.1-201ENST00000406553 254 ntBASIC3.62□□□□□ -1.83
HDLBPQ00341 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.62□□□□□ -1.83
HDLBPQ00341 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.62□□□□□ -1.83
HDLBPQ00341 AC005002.2-201ENST00000438228 269 ntBASIC3.62□□□□□ -1.83
HDLBPQ00341 RPL26P26-201ENST00000480251 434 ntBASIC3.62□□□□□ -1.83
HDLBPQ00341 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.62□□□□□ -1.83
HDLBPQ00341 AC091826.1-201ENST00000514065 313 ntBASIC3.62□□□□□ -1.83
HDLBPQ00341 RNA5SP356-201ENST00000515972 94 ntBASIC3.62□□□□□ -1.83
HDLBPQ00341 SCARNA20.6-201ENST00000517251 106 ntBASIC3.62□□□□□ -1.83
HDLBPQ00341 AC068657.1-201ENST00000520807 306 ntBASIC3.62□□□□□ -1.83
HDLBPQ00341 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.62□□□□□ -1.83
HDLBPQ00341 AC018448.1-201ENST00000552843 316 ntBASIC3.62□□□□□ -1.83
HDLBPQ00341 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.62□□□□□ -1.83
HDLBPQ00341 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.62□□□□□ -1.83
HDLBPQ00341 MIR3162-201ENST00000581818 82 ntBASIC3.62□□□□□ -1.83
HDLBPQ00341 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.62□□□□□ -1.83
HDLBPQ00341 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HDLBPQ00341 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.62□□□□□ -1.83
HDLBPQ00341 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HDLBPQ00341 RNU6-727P-201ENST00000363592 107 ntBASIC3.61□□□□□ -1.83
HDLBPQ00341 SNORA72.2-201ENST00000365028 127 ntBASIC3.61□□□□□ -1.83
HDLBPQ00341 DYNLT3P1-201ENST00000378574 347 ntBASIC3.61□□□□□ -1.83
HDLBPQ00341 MIR95-201ENST00000385072 81 ntBASIC3.61□□□□□ -1.83
HDLBPQ00341 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HDLBPQ00341 AC022018.1-201ENST00000430685 241 ntBASIC3.61□□□□□ -1.83
HDLBPQ00341 AC074290.1-201ENST00000448883 135 ntBASIC3.61□□□□□ -1.83
HDLBPQ00341 SNORA48.11-201ENST00000517015 89 ntBASIC3.61□□□□□ -1.83
HDLBPQ00341 AC104027.1-201ENST00000521887 300 ntBASIC3.61□□□□□ -1.83
HDLBPQ00341 AC107016.2-201ENST00000547968 190 ntBASIC3.61□□□□□ -1.83
HDLBPQ00341 GTF3AP2-201ENST00000557014 266 ntBASIC3.61□□□□□ -1.83
HDLBPQ00341 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.61□□□□□ -1.83
HDLBPQ00341 AC005176.2-201ENST00000596933 147 ntBASIC3.61□□□□□ -1.83
HDLBPQ00341 AC078899.3-201ENST00000599065 212 ntBASIC3.61□□□□□ -1.83
HDLBPQ00341 AC107871.2-201ENST00000612894 502 ntBASIC3.61□□□□□ -1.83
HDLBPQ00341 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
HDLBPQ00341 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HDLBPQ00341 RNU6-626P-201ENST00000363354 107 ntBASIC3.6□□□□□ -1.83
HDLBPQ00341 SNORD56.3-201ENST00000363507 71 ntBASIC3.6□□□□□ -1.83
HDLBPQ00341 RNU6-1026P-201ENST00000384465 108 ntBASIC3.6□□□□□ -1.83
HDLBPQ00341 Y_RNA.512-201ENST00000384518 102 ntBASIC3.6□□□□□ -1.83
HDLBPQ00341 MIR627-201ENST00000384979 97 ntBASIC3.6□□□□□ -1.83
HDLBPQ00341 MIR300-201ENST00000401138 83 ntBASIC3.6□□□□□ -1.83
HDLBPQ00341 HMGN1P18-201ENST00000457642 277 ntBASIC3.6□□□□□ -1.83
HDLBPQ00341 SNORA64.4-201ENST00000516632 81 ntBASIC3.6□□□□□ -1.83
HDLBPQ00341 RNU6-56P-201ENST00000516986 93 ntBASIC3.6□□□□□ -1.83
HDLBPQ00341 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
HDLBPQ00341 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
HDLBPQ00341 AC011373.1-201ENST00000607270 237 ntBASIC3.6□□□□□ -1.83
HDLBPQ00341 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
HDLBPQ00341 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.6□□□□□ -1.83
HDLBPQ00341 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HDLBPQ00341 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
HDLBPQ00341 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
HDLBPQ00341 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
HDLBPQ00341 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
HDLBPQ00341 AL021368.2-201ENST00000606125 5352 ntBASIC3.59□□□□□ -1.83
HDLBPQ00341 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.59□□□□□ -1.83
HDLBPQ00341 MIR148B-201ENST00000362252 99 ntBASIC3.59□□□□□ -1.83
HDLBPQ00341 SNORD81.1-201ENST00000363064 77 ntBASIC3.59□□□□□ -1.83
HDLBPQ00341 Y_RNA.222-201ENST00000364264 102 ntBASIC3.59□□□□□ -1.83
HDLBPQ00341 RNU6-546P-201ENST00000383991 107 ntBASIC3.59□□□□□ -1.83
HDLBPQ00341 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.59□□□□□ -1.83
HDLBPQ00341 AC009969.1-201ENST00000438726 172 ntBASIC3.59□□□□□ -1.83
HDLBPQ00341 NDUFB4P10-201ENST00000452541 359 ntBASIC3.59□□□□□ -1.83
HDLBPQ00341 AC114982.1-201ENST00000469402 321 ntBASIC3.59□□□□□ -1.83
HDLBPQ00341 TRBVB-201ENST00000477100 408 ntBASIC3.59□□□□□ -1.83
HDLBPQ00341 SEPT14P8-201ENST00000508026 178 ntBASIC3.59□□□□□ -1.83
HDLBPQ00341 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.59□□□□□ -1.83
HDLBPQ00341 DEFB131C-201ENST00000528817 165 ntBASIC3.59□□□□□ -1.83
HDLBPQ00341 RRN3P3-201ENST00000549207 578 ntBASIC3.59□□□□□ -1.83
HDLBPQ00341 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.59□□□□□ -1.83
HDLBPQ00341 AC136932.1-201ENST00000574771 208 ntBASIC3.59□□□□□ -1.83
HDLBPQ00341 MIR3117-201ENST00000584034 78 ntBASIC3.59□□□□□ -1.83
HDLBPQ00341 AC006006.1-201ENST00000603082 144 ntBASIC3.59□□□□□ -1.83
HDLBPQ00341 SNORD113-5-201ENST00000607261 78 ntBASIC3.59□□□□□ -1.83
HDLBPQ00341 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
HDLBPQ00341 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.84
HDLBPQ00341 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.59□□□□□ -1.84
HDLBPQ00341 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
HDLBPQ00341 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HDLBPQ00341 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
HDLBPQ00341 RNU6-944P-201ENST00000364023 107 ntBASIC3.58□□□□□ -1.84
HDLBPQ00341 RNU6-806P-201ENST00000365147 105 ntBASIC3.58□□□□□ -1.84
HDLBPQ00341 RNU6-234P-201ENST00000365229 104 ntBASIC3.58□□□□□ -1.84
HDLBPQ00341 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HDLBPQ00341 RNU6-1264P-201ENST00000383891 107 ntBASIC3.58□□□□□ -1.84
HDLBPQ00341 RNU6-20P-201ENST00000384106 107 ntBASIC3.58□□□□□ -1.84
HDLBPQ00341 RNU6-937P-201ENST00000384325 106 ntBASIC3.58□□□□□ -1.84
HDLBPQ00341 RNU6-21P-201ENST00000384710 107 ntBASIC3.58□□□□□ -1.84
HDLBPQ00341 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.58□□□□□ -1.84
HDLBPQ00341 AC090515.1-201ENST00000465295 476 ntBASIC3.58□□□□□ -1.84
HDLBPQ00341 Y_RNA.668-201ENST00000516233 93 ntBASIC3.58□□□□□ -1.84
HDLBPQ00341 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.58□□□□□ -1.84
HDLBPQ00341 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.58□□□□□ -1.84
HDLBPQ00341 AL357075.2-201ENST00000614906 189 ntBASIC3.58□□□□□ -1.84
HDLBPQ00341 AC008873.1-201ENST00000625051 138 ntBASIC3.58□□□□□ -1.84
HDLBPQ00341 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms