Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC012557.2-201ENST00000605919 418 ntBASIC0.35□□□□□ -2.35
CCL20P78556 AP001596.2-201ENST00000608410 312 ntBASIC0.35□□□□□ -2.35
CCL20P78556 MIR6767-201ENST00000637302 66 ntBASIC0.35□□□□□ -2.35
CCL20P78556 CASC19-280ENST00000642102 1351 ntBASIC0.34□□□□□ -2.35
CCL20P78556 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
CCL20P78556 RNU6-945P-201ENST00000383947 107 ntBASIC0.34□□□□□ -2.36
CCL20P78556 RNU6-1029P-201ENST00000384109 107 ntBASIC0.34□□□□□ -2.36
CCL20P78556 SNORD116-13-201ENST00000384408 92 ntBASIC0.34□□□□□ -2.36
CCL20P78556 MIR586-201ENST00000385035 97 ntBASIC0.34□□□□□ -2.36
CCL20P78556 MIR454-201ENST00000390180 115 ntBASIC0.34□□□□□ -2.36
CCL20P78556 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.34□□□□□ -2.36
CCL20P78556 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.34□□□□□ -2.36
CCL20P78556 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.34□□□□□ -2.36
CCL20P78556 AL606662.1-201ENST00000445763 553 ntBASIC0.34□□□□□ -2.36
CCL20P78556 MTCO3P8-201ENST00000453691 755 ntBASIC0.34□□□□□ -2.36
CCL20P78556 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.34□□□□□ -2.36
CCL20P78556 RNU7-182P-201ENST00000459009 62 ntBASIC0.34□□□□□ -2.36
CCL20P78556 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.34□□□□□ -2.36
CCL20P78556 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.34□□□□□ -2.36
CCL20P78556 AC133485.1-201ENST00000567176 124 ntBASIC0.34□□□□□ -2.36
CCL20P78556 AC138907.6-201ENST00000568401 126 ntBASIC0.34□□□□□ -2.36
CCL20P78556 MIR4775-201ENST00000581168 75 ntBASIC0.34□□□□□ -2.36
CCL20P78556 AP000907.4-201ENST00000604143 237 ntBASIC0.34□□□□□ -2.36
CCL20P78556 AC068792.1-201ENST00000621354 417 ntBASIC0.34□□□□□ -2.36
CCL20P78556 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.34□□□□□ -2.36
CCL20P78556 SEPT14P19-203ENST00000633205 211 ntBASIC0.34□□□□□ -2.36
CCL20P78556 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.34□□□□□ -2.36
CCL20P78556 RNU6-1335P-201ENST00000365426 107 ntBASIC0.33□□□□□ -2.36
CCL20P78556 RNU4-48P-201ENST00000365559 182 ntBASIC0.33□□□□□ -2.36
CCL20P78556 SNORA16.2-201ENST00000390991 127 ntBASIC0.33□□□□□ -2.36
CCL20P78556 AC004866.1-201ENST00000411748 78 ntBASIC0.33□□□□□ -2.36
CCL20P78556 AL008987.1-201ENST00000415528 237 ntBASIC0.33□□□□□ -2.36
CCL20P78556 MTND3P17-201ENST00000416968 344 ntBASIC0.33□□□□□ -2.36
CCL20P78556 AC008134.1-201ENST00000420943 193 ntBASIC0.33□□□□□ -2.36
CCL20P78556 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.33□□□□□ -2.36
CCL20P78556 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.33□□□□□ -2.36
CCL20P78556 AC244505.5-201ENST00000443639 207 ntBASIC0.33□□□□□ -2.36
CCL20P78556 AC079781.2-201ENST00000446424 169 ntBASIC0.33□□□□□ -2.36
CCL20P78556 RPS29P15-201ENST00000458329 171 ntBASIC0.33□□□□□ -2.36
CCL20P78556 AL049830.1-201ENST00000468034 425 ntBASIC0.33□□□□□ -2.36
CCL20P78556 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.33□□□□□ -2.36
CCL20P78556 AC113410.1-201ENST00000505029 247 ntBASIC0.33□□□□□ -2.36
CCL20P78556 RNU6-917P-201ENST00000516294 104 ntBASIC0.33□□□□□ -2.36
CCL20P78556 RN7SKP219-201ENST00000516825 296 ntBASIC0.33□□□□□ -2.36
CCL20P78556 RNU2-46P-201ENST00000517038 113 ntBASIC0.33□□□□□ -2.36
CCL20P78556 AC069113.1-201ENST00000517763 267 ntBASIC0.33□□□□□ -2.36
CCL20P78556 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.33□□□□□ -2.36
CCL20P78556 AC016256.1-201ENST00000547971 354 ntBASIC0.33□□□□□ -2.36
CCL20P78556 AC018659.1-201ENST00000551083 169 ntBASIC0.33□□□□□ -2.36
CCL20P78556 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.33□□□□□ -2.36
CCL20P78556 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.33□□□□□ -2.36
CCL20P78556 snoZ196.1-201ENST00000625269 89 ntBASIC0.33□□□□□ -2.36
CCL20P78556 AC007671.2-201ENST00000637344 619 ntBASIC0.33□□□□□ -2.36
CCL20P78556 MTND4P9-201ENST00000507819 1346 ntBASIC0.33□□□□□ -2.36
CCL20P78556 AP000568.1-201ENST00000282964 442 ntBASIC0.32□□□□□ -2.36
CCL20P78556 RNU6-1240P-201ENST00000365155 104 ntBASIC0.32□□□□□ -2.36
CCL20P78556 MIR764-201ENST00000390811 85 ntBASIC0.32□□□□□ -2.36
CCL20P78556 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
CCL20P78556 RNU6-1186P-201ENST00000410429 97 ntBASIC0.32□□□□□ -2.36
CCL20P78556 AC244023.1-201ENST00000426884 112 ntBASIC0.32□□□□□ -2.36
CCL20P78556 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.32□□□□□ -2.36
CCL20P78556 TAF9P1-201ENST00000445421 515 ntBASIC0.32□□□□□ -2.36
CCL20P78556 TAF9P2-201ENST00000454958 515 ntBASIC0.32□□□□□ -2.36
CCL20P78556 AL163540.1-201ENST00000485382 386 ntBASIC0.32□□□□□ -2.36
CCL20P78556 RNU4-57P-201ENST00000515980 135 ntBASIC0.32□□□□□ -2.36
CCL20P78556 AC025647.1-201ENST00000517879 253 ntBASIC0.32□□□□□ -2.36
CCL20P78556 RNU6-323P-201ENST00000521915 107 ntBASIC0.32□□□□□ -2.36
CCL20P78556 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.32□□□□□ -2.36
CCL20P78556 AL162424.1-201ENST00000602325 221 ntBASIC0.32□□□□□ -2.36
CCL20P78556 AC242498.1-201ENST00000604134 111 ntBASIC0.32□□□□□ -2.36
CCL20P78556 AC243994.1-201ENST00000618627 109 ntBASIC0.32□□□□□ -2.36
CCL20P78556 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
CCL20P78556 U3.8-201ENST00000363675 217 ntBASIC0.31□□□□□ -2.36
CCL20P78556 RNU6-74P-201ENST00000384235 107 ntBASIC0.31□□□□□ -2.36
CCL20P78556 RNU6-1127P-201ENST00000384580 107 ntBASIC0.31□□□□□ -2.36
CCL20P78556 RPS3AP3-201ENST00000411933 242 ntBASIC0.31□□□□□ -2.36
CCL20P78556 AC098592.1-201ENST00000419352 333 ntBASIC0.31□□□□□ -2.36
CCL20P78556 AC114737.2-201ENST00000421583 173 ntBASIC0.31□□□□□ -2.36
CCL20P78556 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC0.31□□□□□ -2.36
CCL20P78556 AC092423.1-201ENST00000430165 186 ntBASIC0.31□□□□□ -2.36
CCL20P78556 GPR143P-201ENST00000434155 205 ntBASIC0.31□□□□□ -2.36
CCL20P78556 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.31□□□□□ -2.36
CCL20P78556 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.31□□□□□ -2.36
CCL20P78556 AL009048.1-201ENST00000450437 298 ntBASIC0.31□□□□□ -2.36
CCL20P78556 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.31□□□□□ -2.36
CCL20P78556 SNORD27.1-201ENST00000516319 72 ntBASIC0.31□□□□□ -2.36
CCL20P78556 AP002001.1-203ENST00000534002 267 ntBASIC0.31□□□□□ -2.36
CCL20P78556 AGGF1P4-201ENST00000568249 801 ntBASIC0.31□□□□□ -2.36
CCL20P78556 AC004584.2-201ENST00000570407 410 ntBASIC0.31□□□□□ -2.36
CCL20P78556 RNU6-85P-201ENST00000605989 107 ntBASIC0.31□□□□□ -2.36
CCL20P78556 AL360219.1-201ENST00000610230 366 ntBASIC0.31□□□□□ -2.36
CCL20P78556 AL353997.5-201ENST00000618886 171 ntBASIC0.31□□□□□ -2.36
CCL20P78556 AL078596.1-201ENST00000624856 447 ntBASIC0.31□□□□□ -2.36
CCL20P78556 MTND4P5-201ENST00000435821 1374 ntBASIC0.31□□□□□ -2.36
CCL20P78556 ELL2P3-201ENST00000457883 1602 ntBASIC0.31□□□□□ -2.36
CCL20P78556 OR4G1P-203ENST00000641984 1631 ntBASIC0.31□□□□□ -2.36
CCL20P78556 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC0.3□□□□□ -2.36
CCL20P78556 RNU6-500P-201ENST00000362349 107 ntBASIC0.3□□□□□ -2.36
CCL20P78556 SNORD18A-201ENST00000363753 72 ntBASIC0.3□□□□□ -2.36
CCL20P78556 RNU6-392P-201ENST00000364926 101 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms