Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 AC005899.2-201ENST00000584353 90 ntBASIC1.79□□□□□ -2.12
SRPXP78539 AL031274.2-201ENST00000599419 203 ntBASIC1.79□□□□□ -2.12
SRPXP78539 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.79□□□□□ -2.12
SRPXP78539 AC137590.2-201ENST00000619709 240 ntBASIC1.79□□□□□ -2.12
SRPXP78539 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SRPXP78539 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
SRPXP78539 RNU6-545P-201ENST00000362681 104 ntBASIC1.78□□□□□ -2.12
SRPXP78539 RNU6-873P-201ENST00000363833 107 ntBASIC1.78□□□□□ -2.12
SRPXP78539 RNU6-541P-201ENST00000384709 110 ntBASIC1.78□□□□□ -2.12
SRPXP78539 MIR559-201ENST00000385188 96 ntBASIC1.78□□□□□ -2.12
SRPXP78539 SNORA48.2-201ENST00000390926 124 ntBASIC1.78□□□□□ -2.12
SRPXP78539 RNU6-700P-201ENST00000391043 107 ntBASIC1.78□□□□□ -2.12
SRPXP78539 MIR190B-201ENST00000401119 79 ntBASIC1.78□□□□□ -2.12
SRPXP78539 RNU2-40P-201ENST00000410833 196 ntBASIC1.78□□□□□ -2.12
SRPXP78539 AC022028.1-201ENST00000412054 408 ntBASIC1.78□□□□□ -2.12
SRPXP78539 MTCO2P27-201ENST00000420740 428 ntBASIC1.78□□□□□ -2.12
SRPXP78539 MRPS18CP6-201ENST00000423587 223 ntBASIC1.78□□□□□ -2.12
SRPXP78539 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.78□□□□□ -2.12
SRPXP78539 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.78□□□□□ -2.12
SRPXP78539 RPL17P19-201ENST00000489069 552 ntBASIC1.78□□□□□ -2.12
SRPXP78539 AC008413.1-201ENST00000511864 177 ntBASIC1.78□□□□□ -2.12
SRPXP78539 AC008549.1-201ENST00000512900 643 ntBASIC1.78□□□□□ -2.12
SRPXP78539 AC093303.1-201ENST00000514549 295 ntBASIC1.78□□□□□ -2.12
SRPXP78539 RNU6-470P-201ENST00000515954 104 ntBASIC1.78□□□□□ -2.12
SRPXP78539 RNU7-193P-201ENST00000516723 65 ntBASIC1.78□□□□□ -2.12
SRPXP78539 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.78□□□□□ -2.12
SRPXP78539 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC1.78□□□□□ -2.12
SRPXP78539 AC004584.2-201ENST00000570407 410 ntBASIC1.78□□□□□ -2.12
SRPXP78539 MIR5006-201ENST00000583027 110 ntBASIC1.78□□□□□ -2.12
SRPXP78539 7SK.7-201ENST00000603504 247 ntBASIC1.78□□□□□ -2.12
SRPXP78539 AL133255.1-201ENST00000606374 441 ntBASIC1.78□□□□□ -2.12
SRPXP78539 AC100812.1-201ENST00000607622 580 ntBASIC1.78□□□□□ -2.12
SRPXP78539 AC126177.8-201ENST00000618339 1015 ntBASIC1.78□□□□□ -2.12
SRPXP78539 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
SRPXP78539 MTND5P16-201ENST00000460269 1703 ntBASIC1.77□□□□□ -2.13
SRPXP78539 BX322639.1-202ENST00000423987 2213 ntBASIC1.77□□□□□ -2.13
SRPXP78539 SNORD115-8-201ENST00000363856 82 ntBASIC1.77□□□□□ -2.13
SRPXP78539 RNY3P11-201ENST00000364153 102 ntBASIC1.77□□□□□ -2.13
SRPXP78539 SNORD115-38-201ENST00000365037 82 ntBASIC1.77□□□□□ -2.13
SRPXP78539 Y_RNA.579-201ENST00000390939 94 ntBASIC1.77□□□□□ -2.13
SRPXP78539 AC018634.1-201ENST00000437554 401 ntBASIC1.77□□□□□ -2.13
SRPXP78539 RPL23AP7-203ENST00000449021 469 ntBASIC1.77□□□□□ -2.13
SRPXP78539 AL137159.1-201ENST00000452808 512 ntBASIC1.77□□□□□ -2.13
SRPXP78539 RNU7-87P-201ENST00000459343 62 ntBASIC1.77□□□□□ -2.13
SRPXP78539 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.77□□□□□ -2.13
SRPXP78539 AC132942.1-201ENST00000486753 483 ntBASIC1.77□□□□□ -2.13
SRPXP78539 RPS23P5-201ENST00000495419 428 ntBASIC1.77□□□□□ -2.13
SRPXP78539 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
SRPXP78539 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.77□□□□□ -2.13
SRPXP78539 RN7SKP132-201ENST00000516001 208 ntBASIC1.77□□□□□ -2.13
SRPXP78539 RNU6-307P-201ENST00000516743 106 ntBASIC1.77□□□□□ -2.13
SRPXP78539 RNA5SP364-201ENST00000516938 78 ntBASIC1.77□□□□□ -2.13
SRPXP78539 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.77□□□□□ -2.13
SRPXP78539 GTF3AP2-201ENST00000557014 266 ntBASIC1.77□□□□□ -2.13
SRPXP78539 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.77□□□□□ -2.13
SRPXP78539 MIR5695-201ENST00000579717 85 ntBASIC1.77□□□□□ -2.13
SRPXP78539 TCL6_2.1-201ENST00000615162 119 ntBASIC1.77□□□□□ -2.13
SRPXP78539 MIR6817-201ENST00000615588 66 ntBASIC1.77□□□□□ -2.13
SRPXP78539 DLEU1_1.1-201ENST00000618107 190 ntBASIC1.77□□□□□ -2.13
SRPXP78539 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.77□□□□□ -2.13
SRPXP78539 CENPCP1-201ENST00000533085 2578 ntBASIC1.77□□□□□ -2.13
SRPXP78539 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.77□□□□□ -2.13
SRPXP78539 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
SRPXP78539 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
SRPXP78539 Y_RNA.61-201ENST00000362835 102 ntBASIC1.76□□□□□ -2.13
SRPXP78539 Y_RNA.315-201ENST00000365117 102 ntBASIC1.76□□□□□ -2.13
SRPXP78539 RNU6-1040P-201ENST00000383974 107 ntBASIC1.76□□□□□ -2.13
SRPXP78539 MIR10B-201ENST00000385011 110 ntBASIC1.76□□□□□ -2.13
SRPXP78539 RNU6-159P-201ENST00000391080 106 ntBASIC1.76□□□□□ -2.13
SRPXP78539 MTCYBP10-201ENST00000424905 650 ntBASIC1.76□□□□□ -2.13
SRPXP78539 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.76□□□□□ -2.13
SRPXP78539 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.76□□□□□ -2.13
SRPXP78539 RNU7-152P-201ENST00000458982 64 ntBASIC1.76□□□□□ -2.13
SRPXP78539 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.76□□□□□ -2.13
SRPXP78539 SNORA25.14-201ENST00000516481 132 ntBASIC1.76□□□□□ -2.13
SRPXP78539 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.76□□□□□ -2.13
SRPXP78539 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.76□□□□□ -2.13
SRPXP78539 MIR3935-201ENST00000583472 104 ntBASIC1.76□□□□□ -2.13
SRPXP78539 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.76□□□□□ -2.13
SRPXP78539 SNRPGP17-201ENST00000603780 214 ntBASIC1.76□□□□□ -2.13
SRPXP78539 AC046143.2-201ENST00000609789 160 ntBASIC1.76□□□□□ -2.13
SRPXP78539 uc_338.20-201ENST00000621563 178 ntBASIC1.76□□□□□ -2.13
SRPXP78539 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.76□□□□□ -2.13
SRPXP78539 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
SRPXP78539 AC006026.1-201ENST00000444025 1803 ntBASIC1.75□□□□□ -2.13
SRPXP78539 MIR340-201ENST00000362125 95 ntBASIC1.75□□□□□ -2.13
SRPXP78539 RNU6-727P-201ENST00000363592 107 ntBASIC1.75□□□□□ -2.13
SRPXP78539 Y_RNA.358-201ENST00000365491 99 ntBASIC1.75□□□□□ -2.13
SRPXP78539 Y_RNA.394-201ENST00000383942 103 ntBASIC1.75□□□□□ -2.13
SRPXP78539 MIR221-201ENST00000385135 110 ntBASIC1.75□□□□□ -2.13
SRPXP78539 NDUFB4P4-201ENST00000404822 243 ntBASIC1.75□□□□□ -2.13
SRPXP78539 AL357139.1-201ENST00000407792 426 ntBASIC1.75□□□□□ -2.13
SRPXP78539 SNORD23.1-201ENST00000408212 104 ntBASIC1.75□□□□□ -2.13
SRPXP78539 RNA5SP270-201ENST00000411361 118 ntBASIC1.75□□□□□ -2.13
SRPXP78539 Z92545.1-201ENST00000411782 234 ntBASIC1.75□□□□□ -2.13
SRPXP78539 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.75□□□□□ -2.13
SRPXP78539 USP9YP16-201ENST00000430287 407 ntBASIC1.75□□□□□ -2.13
SRPXP78539 AC236972.2-201ENST00000434979 310 ntBASIC1.75□□□□□ -2.13
SRPXP78539 USP9YP23-201ENST00000455085 407 ntBASIC1.75□□□□□ -2.13
SRPXP78539 RN7SL636P-201ENST00000497504 294 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms