Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 TIMM9P3-201ENST00000428659 274 ntBASIC0.24□□□□□ -2.37
LSM6P62312 AL606517.2-201ENST00000442855 241 ntBASIC0.24□□□□□ -2.37
LSM6P62312 AC016717.1-201ENST00000448918 286 ntBASIC0.24□□□□□ -2.37
LSM6P62312 AC106038.2-201ENST00000520706 568 ntBASIC0.24□□□□□ -2.37
LSM6P62312 AC022217.4-201ENST00000604389 163 ntBASIC0.24□□□□□ -2.37
LSM6P62312 AC013244.3-201ENST00000605614 388 ntBASIC0.24□□□□□ -2.37
LSM6P62312 AL158211.2-201ENST00000607282 395 ntBASIC0.24□□□□□ -2.37
LSM6P62312 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.24□□□□□ -2.37
LSM6P62312 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.24□□□□□ -2.37
LSM6P62312 AC134026.1-201ENST00000623249 2239 ntBASIC0.23□□□□□ -2.37
LSM6P62312 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
LSM6P62312 Y_RNA.97-201ENST00000363094 102 ntBASIC0.23□□□□□ -2.37
LSM6P62312 RNU6-931P-201ENST00000363850 107 ntBASIC0.23□□□□□ -2.37
LSM6P62312 Y_RNA.226-201ENST00000364337 114 ntBASIC0.23□□□□□ -2.37
LSM6P62312 Y_RNA.302-201ENST00000364997 102 ntBASIC0.23□□□□□ -2.37
LSM6P62312 SNORA75.2-201ENST00000391138 150 ntBASIC0.23□□□□□ -2.37
LSM6P62312 SNORA75.3-201ENST00000391231 150 ntBASIC0.23□□□□□ -2.37
LSM6P62312 RNU2-8P-201ENST00000410727 190 ntBASIC0.23□□□□□ -2.37
LSM6P62312 AC008134.1-201ENST00000420943 193 ntBASIC0.23□□□□□ -2.37
LSM6P62312 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.23□□□□□ -2.37
LSM6P62312 EXOSC3P1-201ENST00000448649 500 ntBASIC0.23□□□□□ -2.37
LSM6P62312 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.23□□□□□ -2.37
LSM6P62312 AC245047.8-201ENST00000456455 284 ntBASIC0.23□□□□□ -2.37
LSM6P62312 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.23□□□□□ -2.37
LSM6P62312 LRRC34P2-201ENST00000514850 553 ntBASIC0.23□□□□□ -2.37
LSM6P62312 MTND4LP18-201ENST00000526864 291 ntBASIC0.23□□□□□ -2.37
LSM6P62312 TCL6_2.1-201ENST00000615162 119 ntBASIC0.23□□□□□ -2.37
LSM6P62312 AC138649.3-201ENST00000622154 254 ntBASIC0.23□□□□□ -2.37
LSM6P62312 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.23□□□□□ -2.37
LSM6P62312 AL589743.1-201ENST00000551932 2712 ntBASIC0.22□□□□□ -2.37
LSM6P62312 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
LSM6P62312 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
LSM6P62312 RNU4-92P-201ENST00000363783 136 ntBASIC0.22□□□□□ -2.37
LSM6P62312 RNU4-1-201ENST00000363925 141 ntBASIC0.22□□□□□ -2.37
LSM6P62312 RNU6-116P-201ENST00000384042 109 ntBASIC0.22□□□□□ -2.37
LSM6P62312 RNU6-793P-201ENST00000384233 104 ntBASIC0.22□□□□□ -2.37
LSM6P62312 RNU6-1067P-201ENST00000384752 107 ntBASIC0.22□□□□□ -2.37
LSM6P62312 AL355796.1-201ENST00000406706 323 ntBASIC0.22□□□□□ -2.37
LSM6P62312 MIR1287-201ENST00000408492 90 ntBASIC0.22□□□□□ -2.37
LSM6P62312 AL117339.3-201ENST00000418733 162 ntBASIC0.22□□□□□ -2.37
LSM6P62312 AL354692.1-201ENST00000423044 315 ntBASIC0.22□□□□□ -2.37
LSM6P62312 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.22□□□□□ -2.37
LSM6P62312 MTCO2P7-201ENST00000446518 666 ntBASIC0.22□□□□□ -2.37
LSM6P62312 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.22□□□□□ -2.37
LSM6P62312 AK3P2-201ENST00000507976 429 ntBASIC0.22□□□□□ -2.37
LSM6P62312 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.22□□□□□ -2.37
LSM6P62312 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
LSM6P62312 AP001836.1-201ENST00000604675 523 ntBASIC0.22□□□□□ -2.37
LSM6P62312 SNORA28-201ENST00000606769 126 ntBASIC0.22□□□□□ -2.37
LSM6P62312 AL136317.1-201ENST00000612653 226 ntBASIC0.22□□□□□ -2.37
LSM6P62312 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.22□□□□□ -2.37
LSM6P62312 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.22□□□□□ -2.37
LSM6P62312 Y_RNA.354-201ENST00000365448 111 ntBASIC0.21□□□□□ -2.38
LSM6P62312 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
LSM6P62312 RNY1P14-201ENST00000384426 108 ntBASIC0.21□□□□□ -2.38
LSM6P62312 RNU1-139P-201ENST00000391307 165 ntBASIC0.21□□□□□ -2.38
LSM6P62312 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.21□□□□□ -2.38
LSM6P62312 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.21□□□□□ -2.38
LSM6P62312 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.21□□□□□ -2.38
LSM6P62312 RNU6-1132P-201ENST00000459214 107 ntBASIC0.21□□□□□ -2.38
LSM6P62312 RNU7-94P-201ENST00000459576 63 ntBASIC0.21□□□□□ -2.38
LSM6P62312 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.21□□□□□ -2.38
LSM6P62312 AC002350.1-201ENST00000490759 375 ntBASIC0.21□□□□□ -2.38
LSM6P62312 AC116562.3-201ENST00000506136 177 ntBASIC0.21□□□□□ -2.38
LSM6P62312 RNU6-1069P-201ENST00000516612 133 ntBASIC0.21□□□□□ -2.38
LSM6P62312 AC068587.5-201ENST00000528506 175 ntBASIC0.21□□□□□ -2.38
LSM6P62312 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.21□□□□□ -2.38
LSM6P62312 MIR5006-201ENST00000583027 110 ntBASIC0.21□□□□□ -2.38
LSM6P62312 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.21□□□□□ -2.38
LSM6P62312 AC097065.2-201ENST00000608159 533 ntBASIC0.21□□□□□ -2.38
LSM6P62312 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.21□□□□□ -2.38
LSM6P62312 AC022709.1-201ENST00000615967 87 ntBASIC0.21□□□□□ -2.38
LSM6P62312 AC013437.2-201ENST00000639587 677 ntBASIC0.21□□□□□ -2.38
LSM6P62312 RNY1P12-201ENST00000364251 105 ntBASIC0.2□□□□□ -2.38
LSM6P62312 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.2□□□□□ -2.38
LSM6P62312 RNU6-42P-201ENST00000384165 107 ntBASIC0.2□□□□□ -2.38
LSM6P62312 Y_RNA.480-201ENST00000384364 102 ntBASIC0.2□□□□□ -2.38
LSM6P62312 Y_RNA.576-201ENST00000384781 102 ntBASIC0.2□□□□□ -2.38
LSM6P62312 RNU6-757P-201ENST00000410334 100 ntBASIC0.2□□□□□ -2.38
LSM6P62312 MTCO2P12-201ENST00000427426 682 ntBASIC0.2□□□□□ -2.38
LSM6P62312 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.2□□□□□ -2.38
LSM6P62312 LINC01399-202ENST00000458450 244 ntBASIC0.2□□□□□ -2.38
LSM6P62312 RNU6-1110P-201ENST00000516462 101 ntBASIC0.2□□□□□ -2.38
LSM6P62312 DEFB131C-201ENST00000528817 165 ntBASIC0.2□□□□□ -2.38
LSM6P62312 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.2□□□□□ -2.38
LSM6P62312 AC112191.3-201ENST00000604371 277 ntBASIC0.2□□□□□ -2.38
LSM6P62312 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.2□□□□□ -2.38
LSM6P62312 Y_RNA.116-201ENST00000363292 103 ntBASIC0.19□□□□□ -2.38
LSM6P62312 RNU4-68P-201ENST00000364314 141 ntBASIC0.19□□□□□ -2.38
LSM6P62312 SNORA36A-201ENST00000384221 132 ntBASIC0.19□□□□□ -2.38
LSM6P62312 MIR586-201ENST00000385035 97 ntBASIC0.19□□□□□ -2.38
LSM6P62312 RNU1-119P-201ENST00000391122 165 ntBASIC0.19□□□□□ -2.38
LSM6P62312 MTND3P17-201ENST00000416968 344 ntBASIC0.19□□□□□ -2.38
LSM6P62312 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.19□□□□□ -2.38
LSM6P62312 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.19□□□□□ -2.38
LSM6P62312 AP002001.1-203ENST00000534002 267 ntBASIC0.19□□□□□ -2.38
LSM6P62312 MIR4778-201ENST00000577635 80 ntBASIC0.19□□□□□ -2.38
LSM6P62312 SNORA4-201ENST00000584302 138 ntBASIC0.19□□□□□ -2.38
LSM6P62312 RMST_2.1-201ENST00000617263 136 ntBASIC0.19□□□□□ -2.38
LSM6P62312 MIR6734-201ENST00000621166 68 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms