Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
USP46P62068 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
USP46P62068 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.35□□□□□ -1.71
USP46P62068 RNA5SP252-201ENST00000391131 119 ntBASIC4.35□□□□□ -1.71
USP46P62068 SNORA26-201ENST00000391286 122 ntBASIC4.35□□□□□ -1.71
USP46P62068 MIR1179-201ENST00000408703 91 ntBASIC4.35□□□□□ -1.71
USP46P62068 AL162151.2-201ENST00000448875 158 ntBASIC4.35□□□□□ -1.71
USP46P62068 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC4.35□□□□□ -1.71
USP46P62068 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
USP46P62068 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.35□□□□□ -1.71
USP46P62068 RNU1-104P-201ENST00000517280 175 ntBASIC4.35□□□□□ -1.71
USP46P62068 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.35□□□□□ -1.71
USP46P62068 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.35□□□□□ -1.71
USP46P62068 AC020914.4-201ENST00000597690 277 ntBASIC4.35□□□□□ -1.71
USP46P62068 Pinc.1-201ENST00000616452 154 ntBASIC4.35□□□□□ -1.71
USP46P62068 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
USP46P62068 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.35□□□□□ -1.71
USP46P62068 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.35□□□□□ -1.71
USP46P62068 AC010680.1-201ENST00000590024 3590 ntBASIC4.34□□□□□ -1.71
USP46P62068 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.34□□□□□ -1.71
USP46P62068 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.34□□□□□ -1.71
USP46P62068 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
USP46P62068 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
USP46P62068 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
USP46P62068 Y_RNA.369-201ENST00000365568 117 ntBASIC4.34□□□□□ -1.71
USP46P62068 HMGN2P8-201ENST00000391458 268 ntBASIC4.34□□□□□ -1.71
USP46P62068 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.34□□□□□ -1.71
USP46P62068 RPL27AP5-201ENST00000469428 449 ntBASIC4.34□□□□□ -1.71
USP46P62068 ATP5EP1-201ENST00000510257 156 ntBASIC4.34□□□□□ -1.71
USP46P62068 AC109329.2-201ENST00000519658 482 ntBASIC4.34□□□□□ -1.71
USP46P62068 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.34□□□□□ -1.71
USP46P62068 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.34□□□□□ -1.71
USP46P62068 AC097639.2-201ENST00000603159 172 ntBASIC4.34□□□□□ -1.71
USP46P62068 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.34□□□□□ -1.71
USP46P62068 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.34□□□□□ -1.71
USP46P62068 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.34□□□□□ -1.71
USP46P62068 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
USP46P62068 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
USP46P62068 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
USP46P62068 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
USP46P62068 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USP46P62068 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USP46P62068 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
USP46P62068 AL136360.1-201ENST00000503377 1900 ntBASIC4.33□□□□□ -1.72
USP46P62068 RNU6-234P-201ENST00000365229 104 ntBASIC4.33□□□□□ -1.72
USP46P62068 RNU6-117P-201ENST00000365415 107 ntBASIC4.33□□□□□ -1.72
USP46P62068 RNU6-418P-201ENST00000384035 107 ntBASIC4.33□□□□□ -1.72
USP46P62068 MIRLET7F2-201ENST00000385277 83 ntBASIC4.33□□□□□ -1.72
USP46P62068 RNA5SP354-201ENST00000391247 136 ntBASIC4.33□□□□□ -1.72
USP46P62068 MIR1263-201ENST00000408324 86 ntBASIC4.33□□□□□ -1.72
USP46P62068 RNA5SP127-201ENST00000411051 133 ntBASIC4.33□□□□□ -1.72
USP46P62068 RNU6-948P-201ENST00000516374 107 ntBASIC4.33□□□□□ -1.72
USP46P62068 MIR2114-201ENST00000516645 80 ntBASIC4.33□□□□□ -1.72
USP46P62068 SNORA31.21-201ENST00000517180 77 ntBASIC4.33□□□□□ -1.72
USP46P62068 AC025647.1-201ENST00000517879 253 ntBASIC4.33□□□□□ -1.72
USP46P62068 RN7SL703P-201ENST00000578485 302 ntBASIC4.33□□□□□ -1.72
USP46P62068 AC103810.1-201ENST00000579873 453 ntBASIC4.33□□□□□ -1.72
USP46P62068 MIR4765-201ENST00000585007 77 ntBASIC4.33□□□□□ -1.72
USP46P62068 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
USP46P62068 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
USP46P62068 FAM35DP-201ENST00000323387 2712 ntBASIC4.33□□□□□ -1.72
USP46P62068 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USP46P62068 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
USP46P62068 AL133412.1-201ENST00000380194 2992 ntBASIC4.32□□□□□ -1.72
USP46P62068 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
USP46P62068 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
USP46P62068 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
USP46P62068 Y_RNA.111-201ENST00000363248 100 ntBASIC4.32□□□□□ -1.72
USP46P62068 RNU6-628P-201ENST00000410675 107 ntBASIC4.32□□□□□ -1.72
USP46P62068 RNU2-37P-201ENST00000410695 177 ntBASIC4.32□□□□□ -1.72
USP46P62068 RN7SKP284-201ENST00000411002 343 ntBASIC4.32□□□□□ -1.72
USP46P62068 TRBV25OR9-2-201ENST00000438417 374 ntBASIC4.32□□□□□ -1.72
USP46P62068 MTATP6P21-201ENST00000440681 189 ntBASIC4.32□□□□□ -1.72
USP46P62068 SNRPGP5-201ENST00000456003 220 ntBASIC4.32□□□□□ -1.72
USP46P62068 RNU7-149P-201ENST00000516739 59 ntBASIC4.32□□□□□ -1.72
USP46P62068 CYP4A43P-201ENST00000568156 121 ntBASIC4.32□□□□□ -1.72
USP46P62068 MIR6875-201ENST00000617506 72 ntBASIC4.32□□□□□ -1.72
USP46P62068 AC106754.2-201ENST00000623006 233 ntBASIC4.32□□□□□ -1.72
USP46P62068 AC006435.5-201ENST00000624486 112 ntBASIC4.32□□□□□ -1.72
USP46P62068 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
USP46P62068 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.32□□□□□ -1.72
USP46P62068 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
USP46P62068 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.32□□□□□ -1.72
USP46P62068 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
USP46P62068 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
USP46P62068 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
USP46P62068 LINC02471-203ENST00000641941 4752 ntBASIC4.31□□□□□ -1.72
USP46P62068 RNU6-1209P-201ENST00000363655 107 ntBASIC4.31□□□□□ -1.72
USP46P62068 SNORD31B-201ENST00000364977 69 ntBASIC4.31□□□□□ -1.72
USP46P62068 MIR3074-201ENST00000384885 81 ntBASIC4.31□□□□□ -1.72
USP46P62068 MIR767-201ENST00000390228 109 ntBASIC4.31□□□□□ -1.72
USP46P62068 DBIP2-201ENST00000419076 262 ntBASIC4.31□□□□□ -1.72
USP46P62068 AC008134.1-201ENST00000420943 193 ntBASIC4.31□□□□□ -1.72
USP46P62068 RPS4XP11-201ENST00000446897 772 ntBASIC4.31□□□□□ -1.72
USP46P62068 SNORD11-201ENST00000459124 84 ntBASIC4.31□□□□□ -1.72
USP46P62068 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.31□□□□□ -1.72
USP46P62068 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
USP46P62068 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
USP46P62068 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.31□□□□□ -1.72
USP46P62068 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms