Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 SNORA67.5-201ENST00000391036 107 ntBASIC1.36□□□□□ -2.19
PKNOX1P55347 MIR300-201ENST00000401138 83 ntBASIC1.36□□□□□ -2.19
PKNOX1P55347 Y_RNA.615-201ENST00000410769 117 ntBASIC1.36□□□□□ -2.19
PKNOX1P55347 C8orf59P1-201ENST00000429930 303 ntBASIC1.36□□□□□ -2.19
PKNOX1P55347 UBE2V1P8-201ENST00000437166 265 ntBASIC1.36□□□□□ -2.19
PKNOX1P55347 MTND1P1-201ENST00000445453 368 ntBASIC1.36□□□□□ -2.19
PKNOX1P55347 OR2AQ1P-201ENST00000451972 200 ntBASIC1.36□□□□□ -2.19
PKNOX1P55347 MTCO3P8-201ENST00000453691 755 ntBASIC1.36□□□□□ -2.19
PKNOX1P55347 RNU7-187P-201ENST00000458985 68 ntBASIC1.36□□□□□ -2.19
PKNOX1P55347 HMGN2P26-201ENST00000463169 339 ntBASIC1.36□□□□□ -2.19
PKNOX1P55347 HMGN2P9-201ENST00000476875 229 ntBASIC1.36□□□□□ -2.19
PKNOX1P55347 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.36□□□□□ -2.19
PKNOX1P55347 RNU6-1041P-201ENST00000516254 102 ntBASIC1.36□□□□□ -2.19
PKNOX1P55347 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.36□□□□□ -2.19
PKNOX1P55347 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.36□□□□□ -2.19
PKNOX1P55347 AC026371.1-201ENST00000551867 419 ntBASIC1.36□□□□□ -2.19
PKNOX1P55347 AL160236.1-201ENST00000556317 195 ntBASIC1.36□□□□□ -2.19
PKNOX1P55347 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.36□□□□□ -2.19
PKNOX1P55347 AC026470.2-201ENST00000561492 181 ntBASIC1.36□□□□□ -2.19
PKNOX1P55347 MIR3945-201ENST00000581853 98 ntBASIC1.36□□□□□ -2.19
PKNOX1P55347 AC069114.2-201ENST00000604699 304 ntBASIC1.36□□□□□ -2.19
PKNOX1P55347 MIR3976-201ENST00000606807 139 ntBASIC1.36□□□□□ -2.19
PKNOX1P55347 DISC2.1-201ENST00000612827 205 ntBASIC1.36□□□□□ -2.19
PKNOX1P55347 TCL6_2.1-201ENST00000615162 119 ntBASIC1.36□□□□□ -2.19
PKNOX1P55347 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.35□□□□□ -2.19
PKNOX1P55347 RNU6-451P-201ENST00000362921 107 ntBASIC1.35□□□□□ -2.19
PKNOX1P55347 Y_RNA.256-201ENST00000364594 104 ntBASIC1.35□□□□□ -2.19
PKNOX1P55347 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.35□□□□□ -2.19
PKNOX1P55347 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.35□□□□□ -2.19
PKNOX1P55347 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.35□□□□□ -2.19
PKNOX1P55347 RPS29P23-201ENST00000458635 123 ntBASIC1.35□□□□□ -2.19
PKNOX1P55347 SNORD13-201ENST00000459299 104 ntBASIC1.35□□□□□ -2.19
PKNOX1P55347 RNU7-66P-201ENST00000459469 62 ntBASIC1.35□□□□□ -2.19
PKNOX1P55347 AC007215.1-201ENST00000464893 276 ntBASIC1.35□□□□□ -2.19
PKNOX1P55347 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.35□□□□□ -2.19
PKNOX1P55347 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.35□□□□□ -2.19
PKNOX1P55347 AC093534.1-201ENST00000504977 132 ntBASIC1.35□□□□□ -2.19
PKNOX1P55347 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.35□□□□□ -2.19
PKNOX1P55347 AC015720.1-201ENST00000565251 277 ntBASIC1.35□□□□□ -2.19
PKNOX1P55347 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.35□□□□□ -2.19
PKNOX1P55347 SNORA77B-201ENST00000578179 125 ntBASIC1.35□□□□□ -2.19
PKNOX1P55347 MIR5006-201ENST00000583027 110 ntBASIC1.35□□□□□ -2.19
PKNOX1P55347 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
PKNOX1P55347 AC245060.5-201ENST00000610778 3293 ntBASIC1.35□□□□□ -2.19
PKNOX1P55347 BX322639.1-202ENST00000423987 2213 ntBASIC1.34□□□□□ -2.19
PKNOX1P55347 Y_RNA.38-201ENST00000362617 102 ntBASIC1.34□□□□□ -2.19
PKNOX1P55347 SNORD50.1-201ENST00000362987 71 ntBASIC1.34□□□□□ -2.19
PKNOX1P55347 RNU4-24P-201ENST00000364565 139 ntBASIC1.34□□□□□ -2.19
PKNOX1P55347 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
PKNOX1P55347 MIR548B-201ENST00000385247 97 ntBASIC1.34□□□□□ -2.19
PKNOX1P55347 MIR758-201ENST00000390227 88 ntBASIC1.34□□□□□ -2.19
PKNOX1P55347 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
PKNOX1P55347 MIR1289-2-201ENST00000408360 111 ntBASIC1.34□□□□□ -2.19
PKNOX1P55347 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.34□□□□□ -2.19
PKNOX1P55347 NDUFA5P4-201ENST00000436704 385 ntBASIC1.34□□□□□ -2.19
PKNOX1P55347 HSPE1P9-201ENST00000440046 311 ntBASIC1.34□□□□□ -2.19
PKNOX1P55347 AC009237.7-201ENST00000447357 229 ntBASIC1.34□□□□□ -2.19
PKNOX1P55347 AC016717.1-201ENST00000448918 286 ntBASIC1.34□□□□□ -2.19
PKNOX1P55347 AC079354.2-201ENST00000453523 154 ntBASIC1.34□□□□□ -2.19
PKNOX1P55347 AC011406.1-201ENST00000512440 370 ntBASIC1.34□□□□□ -2.19
PKNOX1P55347 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.34□□□□□ -2.19
PKNOX1P55347 RNA5SP384-201ENST00000516615 116 ntBASIC1.34□□□□□ -2.19
PKNOX1P55347 RRN3P3-201ENST00000549207 578 ntBASIC1.34□□□□□ -2.19
PKNOX1P55347 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.34□□□□□ -2.19
PKNOX1P55347 AP000907.4-201ENST00000604143 237 ntBASIC1.34□□□□□ -2.19
PKNOX1P55347 AL353149.1-201ENST00000610667 244 ntBASIC1.34□□□□□ -2.19
PKNOX1P55347 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.34□□□□□ -2.2
PKNOX1P55347 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
PKNOX1P55347 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
PKNOX1P55347 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.34□□□□□ -2.2
PKNOX1P55347 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
PKNOX1P55347 RNU6-1252P-201ENST00000363054 104 ntBASIC1.33□□□□□ -2.2
PKNOX1P55347 RNY3P3-201ENST00000363816 102 ntBASIC1.33□□□□□ -2.2
PKNOX1P55347 RNU1-96P-201ENST00000364163 162 ntBASIC1.33□□□□□ -2.2
PKNOX1P55347 SNORA63D-201ENST00000364359 132 ntBASIC1.33□□□□□ -2.2
PKNOX1P55347 Y_RNA.373-201ENST00000365600 103 ntBASIC1.33□□□□□ -2.2
PKNOX1P55347 RNU6-128P-201ENST00000383976 107 ntBASIC1.33□□□□□ -2.2
PKNOX1P55347 U8.10-201ENST00000384260 133 ntBASIC1.33□□□□□ -2.2
PKNOX1P55347 RNU6-933P-201ENST00000384424 107 ntBASIC1.33□□□□□ -2.2
PKNOX1P55347 MIR520A-201ENST00000384862 85 ntBASIC1.33□□□□□ -2.2
PKNOX1P55347 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.33□□□□□ -2.2
PKNOX1P55347 AL590632.1-201ENST00000424289 371 ntBASIC1.33□□□□□ -2.2
PKNOX1P55347 DLGAP5P1-201ENST00000430307 464 ntBASIC1.33□□□□□ -2.2
PKNOX1P55347 snoU13.9-201ENST00000458927 103 ntBASIC1.33□□□□□ -2.2
PKNOX1P55347 snoU13.26-201ENST00000459452 105 ntBASIC1.33□□□□□ -2.2
PKNOX1P55347 RPL26P26-201ENST00000480251 434 ntBASIC1.33□□□□□ -2.2
PKNOX1P55347 RPL23AP75-201ENST00000491601 451 ntBASIC1.33□□□□□ -2.2
PKNOX1P55347 RNU2-34P-201ENST00000516534 121 ntBASIC1.33□□□□□ -2.2
PKNOX1P55347 MTND1P35-201ENST00000526739 508 ntBASIC1.33□□□□□ -2.2
PKNOX1P55347 AC016957.1-201ENST00000534895 309 ntBASIC1.33□□□□□ -2.2
PKNOX1P55347 AC084364.2-201ENST00000546924 395 ntBASIC1.33□□□□□ -2.2
PKNOX1P55347 ZNF519P2-201ENST00000557032 169 ntBASIC1.33□□□□□ -2.2
PKNOX1P55347 MIR4753-201ENST00000585119 83 ntBASIC1.33□□□□□ -2.2
PKNOX1P55347 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.33□□□□□ -2.2
PKNOX1P55347 AL645939.4-201ENST00000604495 135 ntBASIC1.33□□□□□ -2.2
PKNOX1P55347 AF250324.2-201ENST00000608299 610 ntBASIC1.33□□□□□ -2.2
PKNOX1P55347 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.33□□□□□ -2.2
PKNOX1P55347 AC126177.8-201ENST00000618339 1015 ntBASIC1.33□□□□□ -2.2
PKNOX1P55347 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.33□□□□□ -2.2
PKNOX1P55347 SCARNA4-201ENST00000629045 128 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms