Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 MIR3117-201ENST00000584034 78 ntBASIC2.38□□□□□ -2.03
CDH12P55289 AL355297.3-201ENST00000604082 446 ntBASIC2.38□□□□□ -2.03
CDH12P55289 RAC1P9-201ENST00000604990 392 ntBASIC2.38□□□□□ -2.03
CDH12P55289 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.38□□□□□ -2.03
CDH12P55289 AC010297.1-201ENST00000623948 149 ntBASIC2.38□□□□□ -2.03
CDH12P55289 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.38□□□□□ -2.03
CDH12P55289 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CDH12P55289 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CDH12P55289 RNU1-76P-201ENST00000362903 159 ntBASIC2.37□□□□□ -2.03
CDH12P55289 RNU6-280P-201ENST00000364145 104 ntBASIC2.37□□□□□ -2.03
CDH12P55289 RNU6-245P-201ENST00000384020 107 ntBASIC2.37□□□□□ -2.03
CDH12P55289 Y_RNA.458-201ENST00000384240 102 ntBASIC2.37□□□□□ -2.03
CDH12P55289 RNU6-1145P-201ENST00000384246 107 ntBASIC2.37□□□□□ -2.03
CDH12P55289 Y_RNA.471-201ENST00000384312 102 ntBASIC2.37□□□□□ -2.03
CDH12P55289 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CDH12P55289 SNORA48.2-201ENST00000390926 124 ntBASIC2.37□□□□□ -2.03
CDH12P55289 RNU2-25P-201ENST00000411041 191 ntBASIC2.37□□□□□ -2.03
CDH12P55289 ARL5AP4-201ENST00000430731 512 ntBASIC2.37□□□□□ -2.03
CDH12P55289 MTND3P2-201ENST00000438452 342 ntBASIC2.37□□□□□ -2.03
CDH12P55289 RPS12P2-201ENST00000439728 269 ntBASIC2.37□□□□□ -2.03
CDH12P55289 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.37□□□□□ -2.03
CDH12P55289 AC010095.1-201ENST00000443543 144 ntBASIC2.37□□□□□ -2.03
CDH12P55289 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.37□□□□□ -2.03
CDH12P55289 MRPS35P2-201ENST00000508242 191 ntBASIC2.37□□□□□ -2.03
CDH12P55289 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.37□□□□□ -2.03
CDH12P55289 SNORA31.15-201ENST00000516771 132 ntBASIC2.37□□□□□ -2.03
CDH12P55289 AL356280.1-201ENST00000603614 379 ntBASIC2.37□□□□□ -2.03
CDH12P55289 AC011476.5-201ENST00000615594 130 ntBASIC2.37□□□□□ -2.03
CDH12P55289 AC005562.2-201ENST00000618264 111 ntBASIC2.37□□□□□ -2.03
CDH12P55289 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
CDH12P55289 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CDH12P55289 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.37□□□□□ -2.03
CDH12P55289 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.37□□□□□ -2.03
CDH12P55289 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
CDH12P55289 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.36□□□□□ -2.03
CDH12P55289 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CDH12P55289 Y_RNA.210-201ENST00000364161 110 ntBASIC2.36□□□□□ -2.03
CDH12P55289 SNORA70.4-201ENST00000365509 134 ntBASIC2.36□□□□□ -2.03
CDH12P55289 SNORA63.7-201ENST00000365579 123 ntBASIC2.36□□□□□ -2.03
CDH12P55289 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
CDH12P55289 MIR627-201ENST00000384979 97 ntBASIC2.36□□□□□ -2.03
CDH12P55289 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CDH12P55289 SNORD12B-201ENST00000410433 91 ntBASIC2.36□□□□□ -2.03
CDH12P55289 SDAD1P3-201ENST00000427380 333 ntBASIC2.36□□□□□ -2.03
CDH12P55289 AC105272.1-201ENST00000438604 198 ntBASIC2.36□□□□□ -2.03
CDH12P55289 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.36□□□□□ -2.03
CDH12P55289 AC004386.2-201ENST00000441858 148 ntBASIC2.36□□□□□ -2.03
CDH12P55289 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.36□□□□□ -2.03
CDH12P55289 snoU13.22-201ENST00000459428 104 ntBASIC2.36□□□□□ -2.03
CDH12P55289 AC091179.3-201ENST00000474761 144 ntBASIC2.36□□□□□ -2.03
CDH12P55289 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.36□□□□□ -2.03
CDH12P55289 MIR449C-201ENST00000516047 92 ntBASIC2.36□□□□□ -2.03
CDH12P55289 RNU6-397P-201ENST00000516226 104 ntBASIC2.36□□□□□ -2.03
CDH12P55289 RNA5SP282-201ENST00000516355 108 ntBASIC2.36□□□□□ -2.03
CDH12P55289 RN7SKP49-201ENST00000516675 260 ntBASIC2.36□□□□□ -2.03
CDH12P55289 AC026470.2-201ENST00000561492 181 ntBASIC2.36□□□□□ -2.03
CDH12P55289 AC008269.2-201ENST00000561915 1105 ntBASIC2.36□□□□□ -2.03
CDH12P55289 MZT1P2-201ENST00000604387 248 ntBASIC2.36□□□□□ -2.03
CDH12P55289 AL121655.1-201ENST00000605811 308 ntBASIC2.36□□□□□ -2.03
CDH12P55289 AC010999.1-201ENST00000611856 324 ntBASIC2.36□□□□□ -2.03
CDH12P55289 AL357075.2-201ENST00000614906 189 ntBASIC2.36□□□□□ -2.03
CDH12P55289 MIR5739-201ENST00000619803 80 ntBASIC2.36□□□□□ -2.03
CDH12P55289 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CDH12P55289 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CDH12P55289 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CDH12P55289 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
CDH12P55289 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
CDH12P55289 RNA5SP387-201ENST00000364226 106 ntBASIC2.35□□□□□ -2.03
CDH12P55289 RNU6-1180P-201ENST00000364935 107 ntBASIC2.35□□□□□ -2.03
CDH12P55289 RNU6-926P-201ENST00000384075 107 ntBASIC2.35□□□□□ -2.03
CDH12P55289 MIR491-201ENST00000384877 84 ntBASIC2.35□□□□□ -2.03
CDH12P55289 MIR568-201ENST00000385036 95 ntBASIC2.35□□□□□ -2.03
CDH12P55289 MIR95-201ENST00000385072 81 ntBASIC2.35□□□□□ -2.03
CDH12P55289 SNORD78.2-201ENST00000391076 69 ntBASIC2.35□□□□□ -2.03
CDH12P55289 FCF1P4-201ENST00000448326 183 ntBASIC2.35□□□□□ -2.03
CDH12P55289 AC067942.3-201ENST00000512025 362 ntBASIC2.35□□□□□ -2.03
CDH12P55289 RN7SKP132-201ENST00000516001 208 ntBASIC2.35□□□□□ -2.03
CDH12P55289 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.35□□□□□ -2.03
CDH12P55289 MIR4659A-201ENST00000580269 81 ntBASIC2.35□□□□□ -2.03
CDH12P55289 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
CDH12P55289 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.35□□□□□ -2.03
CDH12P55289 SNRPGP20-201ENST00000604477 205 ntBASIC2.35□□□□□ -2.03
CDH12P55289 TCL6_2.1-201ENST00000615162 119 ntBASIC2.35□□□□□ -2.03
CDH12P55289 AC240442.1-201ENST00000616055 283 ntBASIC2.35□□□□□ -2.03
CDH12P55289 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CDH12P55289 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.34□□□□□ -2.03
CDH12P55289 RNU1-23P-201ENST00000363361 144 ntBASIC2.34□□□□□ -2.03
CDH12P55289 RNU6-727P-201ENST00000363592 107 ntBASIC2.34□□□□□ -2.03
CDH12P55289 Y_RNA.179-201ENST00000363844 90 ntBASIC2.34□□□□□ -2.03
CDH12P55289 Y_RNA.214-201ENST00000364201 112 ntBASIC2.34□□□□□ -2.03
CDH12P55289 Y_RNA.333-201ENST00000365274 102 ntBASIC2.34□□□□□ -2.03
CDH12P55289 RPL21P1-201ENST00000399532 476 ntBASIC2.34□□□□□ -2.03
CDH12P55289 ELOCP20-201ENST00000422460 345 ntBASIC2.34□□□□□ -2.03
CDH12P55289 AC107083.1-201ENST00000439643 279 ntBASIC2.34□□□□□ -2.03
CDH12P55289 AL445687.1-201ENST00000439946 251 ntBASIC2.34□□□□□ -2.03
CDH12P55289 AL161788.1-201ENST00000441805 169 ntBASIC2.34□□□□□ -2.03
CDH12P55289 AC073910.1-201ENST00000445047 438 ntBASIC2.34□□□□□ -2.03
CDH12P55289 RNU2-44P-201ENST00000516795 194 ntBASIC2.34□□□□□ -2.03
CDH12P55289 RNU6-897P-201ENST00000517135 105 ntBASIC2.34□□□□□ -2.03
CDH12P55289 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms