Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 RNU4-48P-201ENST00000365559 182 ntBASIC0.3□□□□□ -2.36
NKX2-5P52952 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
NKX2-5P52952 SNORA75.2-201ENST00000391138 150 ntBASIC0.3□□□□□ -2.36
NKX2-5P52952 SNORA75.3-201ENST00000391231 150 ntBASIC0.3□□□□□ -2.36
NKX2-5P52952 CDK8P2-201ENST00000415020 547 ntBASIC0.3□□□□□ -2.36
NKX2-5P52952 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.3□□□□□ -2.36
NKX2-5P52952 U7.7-201ENST00000459276 60 ntBASIC0.3□□□□□ -2.36
NKX2-5P52952 RNU6-229P-201ENST00000516614 102 ntBASIC0.3□□□□□ -2.36
NKX2-5P52952 AC103996.1-201ENST00000555468 102 ntBASIC0.3□□□□□ -2.36
NKX2-5P52952 AC004584.2-201ENST00000570407 410 ntBASIC0.3□□□□□ -2.36
NKX2-5P52952 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.3□□□□□ -2.36
NKX2-5P52952 AL121992.2-201ENST00000606262 256 ntBASIC0.3□□□□□ -2.36
NKX2-5P52952 AC097065.2-201ENST00000608159 533 ntBASIC0.3□□□□□ -2.36
NKX2-5P52952 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.3□□□□□ -2.36
NKX2-5P52952 MTND5P17-201ENST00000418405 1603 ntBASIC0.29□□□□□ -2.36
NKX2-5P52952 RNA5SP347-201ENST00000362445 119 ntBASIC0.29□□□□□ -2.36
NKX2-5P52952 RNU6-1287P-201ENST00000362914 107 ntBASIC0.29□□□□□ -2.36
NKX2-5P52952 Y_RNA.164-201ENST00000363709 102 ntBASIC0.29□□□□□ -2.36
NKX2-5P52952 Y_RNA.191-201ENST00000363972 113 ntBASIC0.29□□□□□ -2.36
NKX2-5P52952 RNU6-827P-201ENST00000365553 106 ntBASIC0.29□□□□□ -2.36
NKX2-5P52952 RNU6-157P-201ENST00000383957 107 ntBASIC0.29□□□□□ -2.36
NKX2-5P52952 Y_RNA.480-201ENST00000384364 102 ntBASIC0.29□□□□□ -2.36
NKX2-5P52952 RNU6-636P-201ENST00000384598 107 ntBASIC0.29□□□□□ -2.36
NKX2-5P52952 RNU6-1060P-201ENST00000384664 107 ntBASIC0.29□□□□□ -2.36
NKX2-5P52952 Y_RNA.608-201ENST00000410647 95 ntBASIC0.29□□□□□ -2.36
NKX2-5P52952 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.29□□□□□ -2.36
NKX2-5P52952 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.29□□□□□ -2.36
NKX2-5P52952 AC004386.2-201ENST00000441858 148 ntBASIC0.29□□□□□ -2.36
NKX2-5P52952 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.29□□□□□ -2.36
NKX2-5P52952 FABP5P5-201ENST00000515537 406 ntBASIC0.29□□□□□ -2.36
NKX2-5P52952 AC016256.1-201ENST00000547971 354 ntBASIC0.29□□□□□ -2.36
NKX2-5P52952 SUB1P2-201ENST00000556401 297 ntBASIC0.29□□□□□ -2.36
NKX2-5P52952 MIR4778-201ENST00000577635 80 ntBASIC0.29□□□□□ -2.36
NKX2-5P52952 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.29□□□□□ -2.36
NKX2-5P52952 MIR6504-201ENST00000613520 61 ntBASIC0.29□□□□□ -2.36
NKX2-5P52952 AL607023.1-201ENST00000620045 248 ntBASIC0.29□□□□□ -2.36
NKX2-5P52952 AL138960.2-201ENST00000625145 535 ntBASIC0.29□□□□□ -2.36
NKX2-5P52952 U6.108-201ENST00000637764 58 ntBASIC0.29□□□□□ -2.36
NKX2-5P52952 RNU6-1335P-201ENST00000365426 107 ntBASIC0.28□□□□□ -2.36
NKX2-5P52952 SNORA2.2-201ENST00000365473 135 ntBASIC0.28□□□□□ -2.36
NKX2-5P52952 RNU6-550P-201ENST00000391057 101 ntBASIC0.28□□□□□ -2.36
NKX2-5P52952 RNU6-57P-201ENST00000411348 103 ntBASIC0.28□□□□□ -2.36
NKX2-5P52952 AC008134.1-201ENST00000420943 193 ntBASIC0.28□□□□□ -2.36
NKX2-5P52952 AC025465.4-201ENST00000513422 638 ntBASIC0.28□□□□□ -2.36
NKX2-5P52952 RN7SKP12-201ENST00000516275 143 ntBASIC0.28□□□□□ -2.36
NKX2-5P52952 RNA5SP134-201ENST00000516492 96 ntBASIC0.28□□□□□ -2.36
NKX2-5P52952 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.28□□□□□ -2.36
NKX2-5P52952 AL031667.3-201ENST00000620124 655 ntBASIC0.28□□□□□ -2.36
NKX2-5P52952 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.28□□□□□ -2.36
NKX2-5P52952 MIR586-201ENST00000385035 97 ntBASIC0.27□□□□□ -2.37
NKX2-5P52952 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
NKX2-5P52952 MIR548J-201ENST00000408833 112 ntBASIC0.27□□□□□ -2.37
NKX2-5P52952 MTCO2P23-201ENST00000425216 680 ntBASIC0.27□□□□□ -2.37
NKX2-5P52952 AC098934.3-201ENST00000430450 190 ntBASIC0.27□□□□□ -2.37
NKX2-5P52952 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.27□□□□□ -2.37
NKX2-5P52952 TAF9P1-201ENST00000445421 515 ntBASIC0.27□□□□□ -2.37
NKX2-5P52952 TAF9P2-201ENST00000454958 515 ntBASIC0.27□□□□□ -2.37
NKX2-5P52952 AC245047.8-201ENST00000456455 284 ntBASIC0.27□□□□□ -2.37
NKX2-5P52952 USP9YP25-201ENST00000457708 443 ntBASIC0.27□□□□□ -2.37
NKX2-5P52952 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.27□□□□□ -2.37
NKX2-5P52952 RNU7-57P-201ENST00000459540 60 ntBASIC0.27□□□□□ -2.37
NKX2-5P52952 MTND2P31-201ENST00000512602 616 ntBASIC0.27□□□□□ -2.37
NKX2-5P52952 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.27□□□□□ -2.37
NKX2-5P52952 AC022616.3-201ENST00000523940 148 ntBASIC0.27□□□□□ -2.37
NKX2-5P52952 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
NKX2-5P52952 MTND1P15-201ENST00000579262 949 ntBASIC0.27□□□□□ -2.37
NKX2-5P52952 MIR4452-201ENST00000583004 71 ntBASIC0.27□□□□□ -2.37
NKX2-5P52952 MIR151B-201ENST00000584249 96 ntBASIC0.27□□□□□ -2.37
NKX2-5P52952 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.27□□□□□ -2.37
NKX2-5P52952 MIR5087-201ENST00000635826 76 ntBASIC0.27□□□□□ -2.37
NKX2-5P52952 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.27□□□□□ -2.37
NKX2-5P52952 RNU6-1305P-201ENST00000364353 104 ntBASIC0.26□□□□□ -2.37
NKX2-5P52952 RNU6-660P-201ENST00000364566 109 ntBASIC0.26□□□□□ -2.37
NKX2-5P52952 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.26□□□□□ -2.37
NKX2-5P52952 SNORA12.1-201ENST00000390873 148 ntBASIC0.26□□□□□ -2.37
NKX2-5P52952 MTND3P17-201ENST00000416968 344 ntBASIC0.26□□□□□ -2.37
NKX2-5P52952 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.26□□□□□ -2.37
NKX2-5P52952 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0.26□□□□□ -2.37
NKX2-5P52952 AC092628.1-201ENST00000436250 252 ntBASIC0.26□□□□□ -2.37
NKX2-5P52952 AC009237.7-201ENST00000447357 229 ntBASIC0.26□□□□□ -2.37
NKX2-5P52952 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.26□□□□□ -2.37
NKX2-5P52952 AC002350.1-201ENST00000490759 375 ntBASIC0.26□□□□□ -2.37
NKX2-5P52952 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.26□□□□□ -2.37
NKX2-5P52952 AC022493.2-201ENST00000506122 481 ntBASIC0.26□□□□□ -2.37
NKX2-5P52952 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.26□□□□□ -2.37
NKX2-5P52952 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.26□□□□□ -2.37
NKX2-5P52952 AP002001.1-203ENST00000534002 267 ntBASIC0.26□□□□□ -2.37
NKX2-5P52952 AC069431.2-201ENST00000604149 1099 ntBASIC0.26□□□□□ -2.37
NKX2-5P52952 SNORA28-201ENST00000606769 126 ntBASIC0.26□□□□□ -2.37
NKX2-5P52952 AL139418.1-201ENST00000613613 177 ntBASIC0.26□□□□□ -2.37
NKX2-5P52952 AC104010.1-201ENST00000616889 150 ntBASIC0.26□□□□□ -2.37
NKX2-5P52952 MIR6788-201ENST00000618842 66 ntBASIC0.26□□□□□ -2.37
NKX2-5P52952 AP000568.1-201ENST00000282964 442 ntBASIC0.25□□□□□ -2.37
NKX2-5P52952 SNORA25.9-201ENST00000365087 128 ntBASIC0.25□□□□□ -2.37
NKX2-5P52952 RNU6-1240P-201ENST00000365155 104 ntBASIC0.25□□□□□ -2.37
NKX2-5P52952 SNORD89-201ENST00000390981 114 ntBASIC0.25□□□□□ -2.37
NKX2-5P52952 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.25□□□□□ -2.37
NKX2-5P52952 AL354692.1-201ENST00000423044 315 ntBASIC0.25□□□□□ -2.37
NKX2-5P52952 MTCO2P12-201ENST00000427426 682 ntBASIC0.25□□□□□ -2.37
NKX2-5P52952 AC005002.2-201ENST00000438228 269 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 183.9 ms