Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.24□□□□□ -2.05
CLK1P49759 RNU6-264P-201ENST00000517134 104 ntBASIC2.24□□□□□ -2.05
CLK1P49759 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.24□□□□□ -2.05
CLK1P49759 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.24□□□□□ -2.05
CLK1P49759 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.24□□□□□ -2.05
CLK1P49759 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.24□□□□□ -2.05
CLK1P49759 MIR4448-201ENST00000584360 86 ntBASIC2.24□□□□□ -2.05
CLK1P49759 AC104695.3-201ENST00000604052 296 ntBASIC2.24□□□□□ -2.05
CLK1P49759 AC241585.2-209ENST00000638217 143 ntBASIC2.24□□□□□ -2.05
CLK1P49759 AC016717.2-201ENST00000609089 5141 ntBASIC2.24□□□□□ -2.05
CLK1P49759 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CLK1P49759 RNU6-655P-201ENST00000362858 107 ntBASIC2.23□□□□□ -2.05
CLK1P49759 RNU4-42P-201ENST00000364738 142 ntBASIC2.23□□□□□ -2.05
CLK1P49759 Y_RNA.459-201ENST00000384251 102 ntBASIC2.23□□□□□ -2.05
CLK1P49759 Y_RNA.485-201ENST00000384395 102 ntBASIC2.23□□□□□ -2.05
CLK1P49759 SNORD116-20-201ENST00000384529 92 ntBASIC2.23□□□□□ -2.05
CLK1P49759 MIR634-201ENST00000385208 97 ntBASIC2.23□□□□□ -2.05
CLK1P49759 RNA5SP465-201ENST00000391195 109 ntBASIC2.23□□□□□ -2.05
CLK1P49759 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.23□□□□□ -2.05
CLK1P49759 AC007969.2-201ENST00000441891 191 ntBASIC2.23□□□□□ -2.05
CLK1P49759 AC112492.4-201ENST00000456549 352 ntBASIC2.23□□□□□ -2.05
CLK1P49759 AL049873.1-201ENST00000480540 376 ntBASIC2.23□□□□□ -2.05
CLK1P49759 CR383656.8-201ENST00000549046 145 ntBASIC2.23□□□□□ -2.05
CLK1P49759 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.23□□□□□ -2.05
CLK1P49759 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.23□□□□□ -2.05
CLK1P49759 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.23□□□□□ -2.05
CLK1P49759 MIR4272-201ENST00000635924 64 ntBASIC2.23□□□□□ -2.05
CLK1P49759 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.23□□□□□ -2.05
CLK1P49759 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.23□□□□□ -2.05
CLK1P49759 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.22□□□□□ -2.05
CLK1P49759 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CLK1P49759 AC005592.1-201ENST00000566527 1640 ntBASIC2.22□□□□□ -2.05
CLK1P49759 RNU6-874P-201ENST00000362390 105 ntBASIC2.22□□□□□ -2.05
CLK1P49759 SNORD32A-201ENST00000364805 84 ntBASIC2.22□□□□□ -2.05
CLK1P49759 Y_RNA.527-201ENST00000384573 102 ntBASIC2.22□□□□□ -2.05
CLK1P49759 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CLK1P49759 RNA5SP212-201ENST00000391223 107 ntBASIC2.22□□□□□ -2.05
CLK1P49759 RNU6-1156P-201ENST00000410365 100 ntBASIC2.22□□□□□ -2.05
CLK1P49759 RNU2-23P-201ENST00000410545 195 ntBASIC2.22□□□□□ -2.05
CLK1P49759 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.22□□□□□ -2.05
CLK1P49759 AL353752.1-201ENST00000454946 260 ntBASIC2.22□□□□□ -2.05
CLK1P49759 AP001025.1-201ENST00000486139 332 ntBASIC2.22□□□□□ -2.05
CLK1P49759 AC114801.2-201ENST00000503825 781 ntBASIC2.22□□□□□ -2.05
CLK1P49759 AC091874.1-201ENST00000511402 339 ntBASIC2.22□□□□□ -2.05
CLK1P49759 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.22□□□□□ -2.05
CLK1P49759 RNU6-475P-201ENST00000516073 104 ntBASIC2.22□□□□□ -2.05
CLK1P49759 RNA5SP320-201ENST00000516263 124 ntBASIC2.22□□□□□ -2.05
CLK1P49759 RNA5SP24-201ENST00000516478 95 ntBASIC2.22□□□□□ -2.05
CLK1P49759 SNORA31.23-201ENST00000517219 133 ntBASIC2.22□□□□□ -2.05
CLK1P49759 GNAI2P1-201ENST00000541815 315 ntBASIC2.22□□□□□ -2.05
CLK1P49759 AL117187.1-201ENST00000555482 181 ntBASIC2.22□□□□□ -2.05
CLK1P49759 CTSLP2-204ENST00000629029 392 ntBASIC2.22□□□□□ -2.05
CLK1P49759 AL606534.2-204ENST00000635008 178 ntBASIC2.22□□□□□ -2.05
CLK1P49759 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CLK1P49759 AC091812.1-201ENST00000432235 1948 ntBASIC2.22□□□□□ -2.05
CLK1P49759 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
CLK1P49759 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.21□□□□□ -2.06
CLK1P49759 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CLK1P49759 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
CLK1P49759 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
CLK1P49759 Y_RNA.123-201ENST00000363338 102 ntBASIC2.21□□□□□ -2.06
CLK1P49759 RNU6-527P-201ENST00000363425 104 ntBASIC2.21□□□□□ -2.06
CLK1P49759 Y_RNA.153-201ENST00000363615 91 ntBASIC2.21□□□□□ -2.06
CLK1P49759 RNY3P11-201ENST00000364153 102 ntBASIC2.21□□□□□ -2.06
CLK1P49759 RNU6-546P-201ENST00000383991 107 ntBASIC2.21□□□□□ -2.06
CLK1P49759 RNU6-611P-201ENST00000384276 104 ntBASIC2.21□□□□□ -2.06
CLK1P49759 Y_RNA.510-201ENST00000384511 114 ntBASIC2.21□□□□□ -2.06
CLK1P49759 HMGB3P2-201ENST00000411913 584 ntBASIC2.21□□□□□ -2.06
CLK1P49759 AC074117.2-201ENST00000417130 397 ntBASIC2.21□□□□□ -2.06
CLK1P49759 RPL23AP95-201ENST00000426806 265 ntBASIC2.21□□□□□ -2.06
CLK1P49759 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.21□□□□□ -2.06
CLK1P49759 WARS2P1-201ENST00000429678 537 ntBASIC2.21□□□□□ -2.06
CLK1P49759 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.21□□□□□ -2.06
CLK1P49759 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.21□□□□□ -2.06
CLK1P49759 MTND5P16-201ENST00000460269 1703 ntBASIC2.21□□□□□ -2.06
CLK1P49759 RPL30P10-201ENST00000488148 337 ntBASIC2.21□□□□□ -2.06
CLK1P49759 RPL23AP49-201ENST00000492925 468 ntBASIC2.21□□□□□ -2.06
CLK1P49759 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.21□□□□□ -2.06
CLK1P49759 RNU6-764P-201ENST00000516396 105 ntBASIC2.21□□□□□ -2.06
CLK1P49759 RNA5SP148-201ENST00000516527 94 ntBASIC2.21□□□□□ -2.06
CLK1P49759 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.21□□□□□ -2.06
CLK1P49759 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.21□□□□□ -2.06
CLK1P49759 AC004584.2-201ENST00000570407 410 ntBASIC2.21□□□□□ -2.06
CLK1P49759 AC113195.1-201ENST00000579952 141 ntBASIC2.21□□□□□ -2.06
CLK1P49759 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.21□□□□□ -2.06
CLK1P49759 MIR1244-1-201ENST00000612829 85 ntBASIC2.21□□□□□ -2.06
CLK1P49759 AC087588.2-201ENST00000617667 426 ntBASIC2.21□□□□□ -2.06
CLK1P49759 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.21□□□□□ -2.06
CLK1P49759 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.21□□□□□ -2.06
CLK1P49759 AL078596.1-201ENST00000624856 447 ntBASIC2.21□□□□□ -2.06
CLK1P49759 SCARNA15.3-201ENST00000626315 122 ntBASIC2.21□□□□□ -2.06
CLK1P49759 SCARNA4.1-201ENST00000628597 123 ntBASIC2.21□□□□□ -2.06
CLK1P49759 MIR1244-3-201ENST00000635744 85 ntBASIC2.21□□□□□ -2.06
CLK1P49759 MIR1244-2-201ENST00000636449 85 ntBASIC2.21□□□□□ -2.06
CLK1P49759 MIR1244-4-202ENST00000636813 85 ntBASIC2.21□□□□□ -2.06
CLK1P49759 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.21□□□□□ -2.06
CLK1P49759 ZNF720P1-201ENST00000562403 1939 ntBASIC2.21□□□□□ -2.06
CLK1P49759 AC009487.4-201ENST00000624969 3585 ntBASIC2.2□□□□□ -2.06
CLK1P49759 MIR21-201ENST00000362134 72 ntBASIC2.2□□□□□ -2.06
CLK1P49759 SNORD56.1-201ENST00000362913 68 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms