Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 AC027176.1-201ENST00000560204 514 ntBASIC2.17□□□□□ -2.06
HOXA1P49639 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.17□□□□□ -2.06
HOXA1P49639 AC090517.1-201ENST00000569307 266 ntBASIC2.17□□□□□ -2.06
HOXA1P49639 SNORD53-201ENST00000579969 78 ntBASIC2.17□□□□□ -2.06
HOXA1P49639 AC005034.5-201ENST00000604219 466 ntBASIC2.17□□□□□ -2.06
HOXA1P49639 AC005520.5-201ENST00000613926 164 ntBASIC2.17□□□□□ -2.06
HOXA1P49639 AL078596.1-201ENST00000624856 447 ntBASIC2.17□□□□□ -2.06
HOXA1P49639 AC010329.5-201ENST00000623497 2174 ntBASIC2.17□□□□□ -2.06
HOXA1P49639 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HOXA1P49639 RNU6-1301P-201ENST00000362724 104 ntBASIC2.16□□□□□ -2.06
HOXA1P49639 RNU1-23P-201ENST00000363361 144 ntBASIC2.16□□□□□ -2.06
HOXA1P49639 SNORD14.1-201ENST00000365609 90 ntBASIC2.16□□□□□ -2.06
HOXA1P49639 Y_RNA.422-201ENST00000384054 114 ntBASIC2.16□□□□□ -2.06
HOXA1P49639 SNORA48.5-201ENST00000391143 135 ntBASIC2.16□□□□□ -2.06
HOXA1P49639 RNU1-139P-201ENST00000391307 165 ntBASIC2.16□□□□□ -2.06
HOXA1P49639 RNU6-101P-201ENST00000410323 104 ntBASIC2.16□□□□□ -2.06
HOXA1P49639 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.16□□□□□ -2.06
HOXA1P49639 AC010095.1-201ENST00000443543 144 ntBASIC2.16□□□□□ -2.06
HOXA1P49639 AL139109.1-201ENST00000455491 297 ntBASIC2.16□□□□□ -2.06
HOXA1P49639 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.16□□□□□ -2.06
HOXA1P49639 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.16□□□□□ -2.06
HOXA1P49639 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.16□□□□□ -2.06
HOXA1P49639 RNU6-1045P-201ENST00000516321 107 ntBASIC2.16□□□□□ -2.06
HOXA1P49639 SNORA25.14-201ENST00000516481 132 ntBASIC2.16□□□□□ -2.06
HOXA1P49639 RNU6-586P-201ENST00000517265 104 ntBASIC2.16□□□□□ -2.06
HOXA1P49639 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.16□□□□□ -2.06
HOXA1P49639 EIF4A1P12-201ENST00000551910 141 ntBASIC2.16□□□□□ -2.06
HOXA1P49639 AC136443.5-201ENST00000603741 370 ntBASIC2.16□□□□□ -2.06
HOXA1P49639 MZT1P2-201ENST00000604387 248 ntBASIC2.16□□□□□ -2.06
HOXA1P49639 AL357075.2-201ENST00000614906 189 ntBASIC2.16□□□□□ -2.06
HOXA1P49639 AC245884.12-201ENST00000615364 59 ntBASIC2.16□□□□□ -2.06
HOXA1P49639 MIR7157-201ENST00000635801 60 ntBASIC2.16□□□□□ -2.06
HOXA1P49639 U6.92-201ENST00000636464 89 ntBASIC2.16□□□□□ -2.06
HOXA1P49639 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
HOXA1P49639 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
HOXA1P49639 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.15□□□□□ -2.06
HOXA1P49639 Y_RNA.145-201ENST00000363527 102 ntBASIC2.15□□□□□ -2.07
HOXA1P49639 U3.9-201ENST00000363823 204 ntBASIC2.15□□□□□ -2.07
HOXA1P49639 SNORD32B-201ENST00000364460 84 ntBASIC2.15□□□□□ -2.07
HOXA1P49639 RNA5SP125-201ENST00000364843 120 ntBASIC2.15□□□□□ -2.07
HOXA1P49639 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.15□□□□□ -2.07
HOXA1P49639 RNU6-281P-201ENST00000384212 103 ntBASIC2.15□□□□□ -2.07
HOXA1P49639 U6atac.2-201ENST00000408644 118 ntBASIC2.15□□□□□ -2.07
HOXA1P49639 RNU6-130P-201ENST00000411112 103 ntBASIC2.15□□□□□ -2.07
HOXA1P49639 RPS26P42-201ENST00000413485 326 ntBASIC2.15□□□□□ -2.07
HOXA1P49639 DPH3P2-201ENST00000422618 250 ntBASIC2.15□□□□□ -2.07
HOXA1P49639 AC096638.1-201ENST00000444678 216 ntBASIC2.15□□□□□ -2.07
HOXA1P49639 RNA5SP341-201ENST00000516261 117 ntBASIC2.15□□□□□ -2.07
HOXA1P49639 SNORA40.14-201ENST00000516543 86 ntBASIC2.15□□□□□ -2.07
HOXA1P49639 AP002770.2-201ENST00000543613 532 ntBASIC2.15□□□□□ -2.07
HOXA1P49639 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.15□□□□□ -2.07
HOXA1P49639 AL442163.3-201ENST00000554110 156 ntBASIC2.15□□□□□ -2.07
HOXA1P49639 AC009127.3-201ENST00000570531 403 ntBASIC2.15□□□□□ -2.07
HOXA1P49639 AL356280.1-201ENST00000603614 379 ntBASIC2.15□□□□□ -2.07
HOXA1P49639 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.15□□□□□ -2.07
HOXA1P49639 AL021879.1-201ENST00000611756 288 ntBASIC2.15□□□□□ -2.07
HOXA1P49639 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.15□□□□□ -2.07
HOXA1P49639 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
HOXA1P49639 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
HOXA1P49639 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
HOXA1P49639 Y_RNA.26-201ENST00000362539 101 ntBASIC2.14□□□□□ -2.07
HOXA1P49639 RNU6-1309P-201ENST00000363305 108 ntBASIC2.14□□□□□ -2.07
HOXA1P49639 SNORD115-8-201ENST00000363856 82 ntBASIC2.14□□□□□ -2.07
HOXA1P49639 RNU6-743P-201ENST00000364151 106 ntBASIC2.14□□□□□ -2.07
HOXA1P49639 SNORD115-38-201ENST00000365037 82 ntBASIC2.14□□□□□ -2.07
HOXA1P49639 RNU4-52P-201ENST00000384209 138 ntBASIC2.14□□□□□ -2.07
HOXA1P49639 Y_RNA.512-201ENST00000384518 102 ntBASIC2.14□□□□□ -2.07
HOXA1P49639 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.14□□□□□ -2.07
HOXA1P49639 EEF1A1P41-201ENST00000414667 207 ntBASIC2.14□□□□□ -2.07
HOXA1P49639 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.14□□□□□ -2.07
HOXA1P49639 AL445687.1-201ENST00000439946 251 ntBASIC2.14□□□□□ -2.07
HOXA1P49639 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.14□□□□□ -2.07
HOXA1P49639 AC004386.2-201ENST00000441858 148 ntBASIC2.14□□□□□ -2.07
HOXA1P49639 AC010655.3-201ENST00000478818 450 ntBASIC2.14□□□□□ -2.07
HOXA1P49639 RNU6-475P-201ENST00000516073 104 ntBASIC2.14□□□□□ -2.07
HOXA1P49639 Y_RNA.715-201ENST00000517082 110 ntBASIC2.14□□□□□ -2.07
HOXA1P49639 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.14□□□□□ -2.07
HOXA1P49639 AC023442.1-201ENST00000531247 422 ntBASIC2.14□□□□□ -2.07
HOXA1P49639 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.14□□□□□ -2.07
HOXA1P49639 AC023824.2-201ENST00000566185 400 ntBASIC2.14□□□□□ -2.07
HOXA1P49639 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.14□□□□□ -2.07
HOXA1P49639 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.14□□□□□ -2.07
HOXA1P49639 RAC1P9-201ENST00000604990 392 ntBASIC2.14□□□□□ -2.07
HOXA1P49639 AL138963.2-201ENST00000605137 226 ntBASIC2.14□□□□□ -2.07
HOXA1P49639 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.14□□□□□ -2.07
HOXA1P49639 AC131280.1-202ENST00000624067 4211 ntBASIC2.14□□□□□ -2.07
HOXA1P49639 ZNF720P1-201ENST00000562403 1939 ntBASIC2.13□□□□□ -2.07
HOXA1P49639 Y_RNA.210-201ENST00000364161 110 ntBASIC2.13□□□□□ -2.07
HOXA1P49639 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HOXA1P49639 AC117470.1-201ENST00000381974 330 ntBASIC2.13□□□□□ -2.07
HOXA1P49639 AL138827.1-201ENST00000402666 306 ntBASIC2.13□□□□□ -2.07
HOXA1P49639 U3.40-201ENST00000408706 208 ntBASIC2.13□□□□□ -2.07
HOXA1P49639 RNU2-20P-201ENST00000410425 191 ntBASIC2.13□□□□□ -2.07
HOXA1P49639 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.13□□□□□ -2.07
HOXA1P49639 AC112220.1-201ENST00000434628 355 ntBASIC2.13□□□□□ -2.07
HOXA1P49639 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.13□□□□□ -2.07
HOXA1P49639 MTND5P22-201ENST00000458380 195 ntBASIC2.13□□□□□ -2.07
HOXA1P49639 AC007215.1-201ENST00000464893 276 ntBASIC2.13□□□□□ -2.07
HOXA1P49639 S100A11P2-201ENST00000467589 312 ntBASIC2.13□□□□□ -2.07
HOXA1P49639 AC091179.3-201ENST00000474761 144 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms