Protein–RNA interactions for Protein: P48553

TRAPPC10, Trafficking protein particle complex subunit 10, humanhuman

Predictions only

Length 1,259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10P48553 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
TRAPPC10P48553 SNORA72.1-201ENST00000363485 129 ntBASIC2.5□□□□□ -2.01
TRAPPC10P48553 RNU6-280P-201ENST00000364145 104 ntBASIC2.5□□□□□ -2.01
TRAPPC10P48553 AC096920.1-201ENST00000423991 241 ntBASIC2.5□□□□□ -2.01
TRAPPC10P48553 Z82188.1-201ENST00000436709 154 ntBASIC2.5□□□□□ -2.01
TRAPPC10P48553 AL357134.1-201ENST00000445848 426 ntBASIC2.5□□□□□ -2.01
TRAPPC10P48553 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.5□□□□□ -2.01
TRAPPC10P48553 RPS27P21-201ENST00000486977 252 ntBASIC2.5□□□□□ -2.01
TRAPPC10P48553 Y_RNA.670-201ENST00000516255 105 ntBASIC2.5□□□□□ -2.01
TRAPPC10P48553 SCARNA16.3-201ENST00000516595 184 ntBASIC2.5□□□□□ -2.01
TRAPPC10P48553 Y_RNA.706-201ENST00000516933 99 ntBASIC2.5□□□□□ -2.01
TRAPPC10P48553 RNU6-58P-201ENST00000517143 103 ntBASIC2.5□□□□□ -2.01
TRAPPC10P48553 AC027288.2-201ENST00000553028 243 ntBASIC2.5□□□□□ -2.01
TRAPPC10P48553 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.5□□□□□ -2.01
TRAPPC10P48553 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.5□□□□□ -2.01
TRAPPC10P48553 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.5□□□□□ -2.01
TRAPPC10P48553 AC009229.3-201ENST00000608056 282 ntBASIC2.5□□□□□ -2.01
TRAPPC10P48553 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.5□□□□□ -2.01
TRAPPC10P48553 SDR42E1P4-201ENST00000620894 481 ntBASIC2.5□□□□□ -2.01
TRAPPC10P48553 ZNF658B-202ENST00000615961 3375 ntBASIC2.49□□□□□ -2.01
TRAPPC10P48553 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.49□□□□□ -2.01
TRAPPC10P48553 ZNF204P-201ENST00000416749 2397 ntBASIC2.49□□□□□ -2.01
TRAPPC10P48553 ZNF720P1-201ENST00000562403 1939 ntBASIC2.49□□□□□ -2.01
TRAPPC10P48553 Y_RNA.2-201ENST00000362330 96 ntBASIC2.49□□□□□ -2.01
TRAPPC10P48553 U8.2-201ENST00000363156 134 ntBASIC2.49□□□□□ -2.01
TRAPPC10P48553 RNU6-23P-201ENST00000363283 107 ntBASIC2.49□□□□□ -2.01
TRAPPC10P48553 Y_RNA.132-201ENST00000363421 102 ntBASIC2.49□□□□□ -2.01
TRAPPC10P48553 RNU6-541P-201ENST00000384709 110 ntBASIC2.49□□□□□ -2.01
TRAPPC10P48553 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
TRAPPC10P48553 SNORA12.2-201ENST00000391040 156 ntBASIC2.49□□□□□ -2.01
TRAPPC10P48553 MIR1283-1-201ENST00000408494 87 ntBASIC2.49□□□□□ -2.01
TRAPPC10P48553 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.49□□□□□ -2.01
TRAPPC10P48553 BX510359.4-201ENST00000423750 193 ntBASIC2.49□□□□□ -2.01
TRAPPC10P48553 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.49□□□□□ -2.01
TRAPPC10P48553 CBX3P8-201ENST00000532412 525 ntBASIC2.49□□□□□ -2.01
TRAPPC10P48553 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.49□□□□□ -2.01
TRAPPC10P48553 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.49□□□□□ -2.01
TRAPPC10P48553 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.49□□□□□ -2.01
TRAPPC10P48553 MIR5701-3-201ENST00000578890 82 ntBASIC2.49□□□□□ -2.01
TRAPPC10P48553 AC005730.3-201ENST00000583067 366 ntBASIC2.49□□□□□ -2.01
TRAPPC10P48553 MIR4753-201ENST00000585119 83 ntBASIC2.49□□□□□ -2.01
TRAPPC10P48553 MIR5701-1-201ENST00000585138 82 ntBASIC2.49□□□□□ -2.01
TRAPPC10P48553 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.49□□□□□ -2.01
TRAPPC10P48553 MIR5701-2-201ENST00000615634 82 ntBASIC2.49□□□□□ -2.01
TRAPPC10P48553 AL162373.1-201ENST00000620433 407 ntBASIC2.49□□□□□ -2.01
TRAPPC10P48553 U1.36-201ENST00000620684 176 ntBASIC2.49□□□□□ -2.01
TRAPPC10P48553 AC008873.1-201ENST00000625051 138 ntBASIC2.49□□□□□ -2.01
TRAPPC10P48553 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.49□□□□□ -2.01
TRAPPC10P48553 AC005336.3-201ENST00000623833 2679 ntBASIC2.49□□□□□ -2.01
TRAPPC10P48553 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.48□□□□□ -2.01
TRAPPC10P48553 RNA5SP276-201ENST00000362580 94 ntBASIC2.48□□□□□ -2.01
TRAPPC10P48553 RNU1-62P-201ENST00000362599 164 ntBASIC2.48□□□□□ -2.01
TRAPPC10P48553 MIR586-201ENST00000385035 97 ntBASIC2.48□□□□□ -2.01
TRAPPC10P48553 RNU6-700P-201ENST00000391043 107 ntBASIC2.48□□□□□ -2.01
TRAPPC10P48553 RNU11-3P-201ENST00000391111 133 ntBASIC2.48□□□□□ -2.01
TRAPPC10P48553 AL356379.1-201ENST00000414105 126 ntBASIC2.48□□□□□ -2.01
TRAPPC10P48553 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.48□□□□□ -2.01
TRAPPC10P48553 MTCO3P8-201ENST00000453691 755 ntBASIC2.48□□□□□ -2.01
TRAPPC10P48553 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.48□□□□□ -2.01
TRAPPC10P48553 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.48□□□□□ -2.01
TRAPPC10P48553 AC107222.1-201ENST00000510899 637 ntBASIC2.48□□□□□ -2.01
TRAPPC10P48553 AL117351.2-201ENST00000513571 157 ntBASIC2.48□□□□□ -2.01
TRAPPC10P48553 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.48□□□□□ -2.01
TRAPPC10P48553 AC105029.1-201ENST00000520250 669 ntBASIC2.48□□□□□ -2.01
TRAPPC10P48553 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.48□□□□□ -2.01
TRAPPC10P48553 AL121579.1-201ENST00000555129 305 ntBASIC2.48□□□□□ -2.01
TRAPPC10P48553 MIR548S-201ENST00000581352 82 ntBASIC2.48□□□□□ -2.01
TRAPPC10P48553 AC113139.1-201ENST00000605049 239 ntBASIC2.48□□□□□ -2.01
TRAPPC10P48553 AL359757.2-201ENST00000624309 274 ntBASIC2.48□□□□□ -2.01
TRAPPC10P48553 Y_RNA.142-201ENST00000363491 102 ntBASIC2.47□□□□□ -2.01
TRAPPC10P48553 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
TRAPPC10P48553 U3.40-201ENST00000408706 208 ntBASIC2.47□□□□□ -2.01
TRAPPC10P48553 MTCYBP10-201ENST00000424905 650 ntBASIC2.47□□□□□ -2.01
TRAPPC10P48553 HMGN2P3-201ENST00000433603 273 ntBASIC2.47□□□□□ -2.01
TRAPPC10P48553 HMGN2P5-201ENST00000436882 273 ntBASIC2.47□□□□□ -2.01
TRAPPC10P48553 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.47□□□□□ -2.01
TRAPPC10P48553 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.47□□□□□ -2.01
TRAPPC10P48553 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.47□□□□□ -2.01
TRAPPC10P48553 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.47□□□□□ -2.01
TRAPPC10P48553 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
TRAPPC10P48553 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
TRAPPC10P48553 RNA5SP493-201ENST00000364115 91 ntBASIC2.46□□□□□ -2.02
TRAPPC10P48553 RNU6-159P-201ENST00000391080 106 ntBASIC2.46□□□□□ -2.02
TRAPPC10P48553 SNORA75.4-201ENST00000391278 119 ntBASIC2.46□□□□□ -2.02
TRAPPC10P48553 AL158823.1-201ENST00000418441 478 ntBASIC2.46□□□□□ -2.02
TRAPPC10P48553 AL353689.1-201ENST00000438895 199 ntBASIC2.46□□□□□ -2.02
TRAPPC10P48553 SNRPEP8-201ENST00000442866 260 ntBASIC2.46□□□□□ -2.02
TRAPPC10P48553 RPL23AP3-201ENST00000453844 468 ntBASIC2.46□□□□□ -2.02
TRAPPC10P48553 RNA5SP233-201ENST00000459153 113 ntBASIC2.46□□□□□ -2.02
TRAPPC10P48553 AC067942.3-201ENST00000512025 362 ntBASIC2.46□□□□□ -2.02
TRAPPC10P48553 AC008549.1-201ENST00000512900 643 ntBASIC2.46□□□□□ -2.02
TRAPPC10P48553 SNORA31.11-201ENST00000516528 139 ntBASIC2.46□□□□□ -2.02
TRAPPC10P48553 AP005660.1-201ENST00000522972 293 ntBASIC2.46□□□□□ -2.02
TRAPPC10P48553 MIR5690-201ENST00000583739 73 ntBASIC2.46□□□□□ -2.02
TRAPPC10P48553 MIR5002-201ENST00000584713 97 ntBASIC2.46□□□□□ -2.02
TRAPPC10P48553 AC005786.1-201ENST00000588553 154 ntBASIC2.46□□□□□ -2.02
TRAPPC10P48553 AC005034.5-201ENST00000604219 466 ntBASIC2.46□□□□□ -2.02
TRAPPC10P48553 SNORD11B-201ENST00000607707 90 ntBASIC2.46□□□□□ -2.02
TRAPPC10P48553 AC005014.2-201ENST00000607795 599 ntBASIC2.46□□□□□ -2.02
TRAPPC10P48553 AL669831.3-213ENST00000636676 183 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms