Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.95□□□□□ -2.1
NEDD4P46934 AC103851.1-201ENST00000506833 274 ntBASIC1.95□□□□□ -2.1
NEDD4P46934 AC005741.1-201ENST00000511094 432 ntBASIC1.95□□□□□ -2.1
NEDD4P46934 AC034114.1-201ENST00000520293 285 ntBASIC1.95□□□□□ -2.1
NEDD4P46934 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.95□□□□□ -2.1
NEDD4P46934 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.95□□□□□ -2.1
NEDD4P46934 MRPS36P4-201ENST00000534436 298 ntBASIC1.95□□□□□ -2.1
NEDD4P46934 AL121579.1-201ENST00000555129 305 ntBASIC1.95□□□□□ -2.1
NEDD4P46934 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.95□□□□□ -2.1
NEDD4P46934 MIR5696-201ENST00000578474 85 ntBASIC1.95□□□□□ -2.1
NEDD4P46934 MIR548S-201ENST00000581352 82 ntBASIC1.95□□□□□ -2.1
NEDD4P46934 AL132822.1-201ENST00000617063 513 ntBASIC1.95□□□□□ -2.1
NEDD4P46934 TPTEP1-208ENST00000636884 213 ntBASIC1.95□□□□□ -2.1
NEDD4P46934 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
NEDD4P46934 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
NEDD4P46934 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
NEDD4P46934 CENPCP1-201ENST00000533085 2578 ntBASIC1.94□□□□□ -2.1
NEDD4P46934 RNU1-17P-201ENST00000363022 152 ntBASIC1.94□□□□□ -2.1
NEDD4P46934 RNU4-9P-201ENST00000364951 139 ntBASIC1.94□□□□□ -2.1
NEDD4P46934 RNU6-26P-201ENST00000383985 107 ntBASIC1.94□□□□□ -2.1
NEDD4P46934 RNU6-378P-201ENST00000384324 107 ntBASIC1.94□□□□□ -2.1
NEDD4P46934 SNORA17.3-201ENST00000391159 129 ntBASIC1.94□□□□□ -2.1
NEDD4P46934 MIR208B-201ENST00000401172 77 ntBASIC1.94□□□□□ -2.1
NEDD4P46934 AL355497.1-201ENST00000406262 551 ntBASIC1.94□□□□□ -2.1
NEDD4P46934 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.94□□□□□ -2.1
NEDD4P46934 USP9YP30-201ENST00000430729 455 ntBASIC1.94□□□□□ -2.1
NEDD4P46934 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.94□□□□□ -2.1
NEDD4P46934 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.94□□□□□ -2.1
NEDD4P46934 RPL23AP75-201ENST00000491601 451 ntBASIC1.94□□□□□ -2.1
NEDD4P46934 RNA5SP458-201ENST00000516188 119 ntBASIC1.94□□□□□ -2.1
NEDD4P46934 MIR514B-201ENST00000516774 80 ntBASIC1.94□□□□□ -2.1
NEDD4P46934 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.94□□□□□ -2.1
NEDD4P46934 AC109446.1-201ENST00000566172 220 ntBASIC1.94□□□□□ -2.1
NEDD4P46934 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.94□□□□□ -2.1
NEDD4P46934 MIR3126-201ENST00000577443 74 ntBASIC1.94□□□□□ -2.1
NEDD4P46934 AC005730.3-201ENST00000583067 366 ntBASIC1.94□□□□□ -2.1
NEDD4P46934 7SK.7-201ENST00000603504 247 ntBASIC1.94□□□□□ -2.1
NEDD4P46934 SNRPGP17-201ENST00000603780 214 ntBASIC1.94□□□□□ -2.1
NEDD4P46934 AC018462.2-201ENST00000605375 395 ntBASIC1.94□□□□□ -2.1
NEDD4P46934 AC025253.1-201ENST00000613623 543 ntBASIC1.94□□□□□ -2.1
NEDD4P46934 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
NEDD4P46934 Y_RNA.142-201ENST00000363491 102 ntBASIC1.93□□□□□ -2.1
NEDD4P46934 Y_RNA.184-201ENST00000363884 108 ntBASIC1.93□□□□□ -2.1
NEDD4P46934 Y_RNA.490-201ENST00000384413 102 ntBASIC1.93□□□□□ -2.1
NEDD4P46934 RNU6-1093P-201ENST00000391194 107 ntBASIC1.93□□□□□ -2.1
NEDD4P46934 AL356432.1-201ENST00000405809 419 ntBASIC1.93□□□□□ -2.1
NEDD4P46934 RNU6-1050P-201ENST00000410388 107 ntBASIC1.93□□□□□ -2.1
NEDD4P46934 RNU2-48P-201ENST00000410694 191 ntBASIC1.93□□□□□ -2.1
NEDD4P46934 OR2AQ1P-201ENST00000451972 200 ntBASIC1.93□□□□□ -2.1
NEDD4P46934 AC026782.1-201ENST00000512952 449 ntBASIC1.93□□□□□ -2.1
NEDD4P46934 RNU6-667P-201ENST00000517186 102 ntBASIC1.93□□□□□ -2.1
NEDD4P46934 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.93□□□□□ -2.1
NEDD4P46934 AC026271.5-201ENST00000577873 130 ntBASIC1.93□□□□□ -2.1
NEDD4P46934 AC243960.4-201ENST00000600532 288 ntBASIC1.93□□□□□ -2.1
NEDD4P46934 AP000654.2-201ENST00000605633 586 ntBASIC1.93□□□□□ -2.1
NEDD4P46934 AC009994.1-201ENST00000606889 253 ntBASIC1.93□□□□□ -2.1
NEDD4P46934 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.93□□□□□ -2.1
NEDD4P46934 SCARNA4-201ENST00000629045 128 ntBASIC1.93□□□□□ -2.1
NEDD4P46934 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
NEDD4P46934 Y_RNA.303-201ENST00000364998 94 ntBASIC1.92□□□□□ -2.1
NEDD4P46934 RNU6-601P-201ENST00000384540 107 ntBASIC1.92□□□□□ -2.1
NEDD4P46934 RN7SKP101-201ENST00000411376 320 ntBASIC1.92□□□□□ -2.1
NEDD4P46934 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.92□□□□□ -2.1
NEDD4P46934 Y_RNA.635-201ENST00000459041 101 ntBASIC1.92□□□□□ -2.1
NEDD4P46934 AF186996.7-201ENST00000492781 209 ntBASIC1.92□□□□□ -2.1
NEDD4P46934 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.92□□□□□ -2.1
NEDD4P46934 RNA5SP137-201ENST00000516833 135 ntBASIC1.92□□□□□ -2.1
NEDD4P46934 RNU6-1198P-201ENST00000516904 67 ntBASIC1.92□□□□□ -2.1
NEDD4P46934 Y_RNA.708-201ENST00000516950 96 ntBASIC1.92□□□□□ -2.1
NEDD4P46934 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.92□□□□□ -2.1
NEDD4P46934 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.92□□□□□ -2.1
NEDD4P46934 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
NEDD4P46934 SNORD115-32-201ENST00000364079 82 ntBASIC1.91□□□□□ -2.1
NEDD4P46934 RNU6-842P-201ENST00000384269 107 ntBASIC1.91□□□□□ -2.1
NEDD4P46934 SRIP3-201ENST00000413200 219 ntBASIC1.91□□□□□ -2.1
NEDD4P46934 EDDM3CP-201ENST00000415977 425 ntBASIC1.91□□□□□ -2.1
NEDD4P46934 MTND5P20-201ENST00000448677 143 ntBASIC1.91□□□□□ -2.1
NEDD4P46934 snoU13.6-201ENST00000458785 104 ntBASIC1.91□□□□□ -2.1
NEDD4P46934 RN7SKP210-201ENST00000459176 261 ntBASIC1.91□□□□□ -2.1
NEDD4P46934 AC007215.1-201ENST00000464893 276 ntBASIC1.91□□□□□ -2.1
NEDD4P46934 AC087477.1-201ENST00000465747 340 ntBASIC1.91□□□□□ -2.1
NEDD4P46934 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.91□□□□□ -2.1
NEDD4P46934 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.91□□□□□ -2.1
NEDD4P46934 AC026470.2-201ENST00000561492 181 ntBASIC1.91□□□□□ -2.1
NEDD4P46934 AC010928.2-201ENST00000588017 287 ntBASIC1.91□□□□□ -2.1
NEDD4P46934 MIR502-201ENST00000606349 86 ntBASIC1.91□□□□□ -2.1
NEDD4P46934 RMST_6.1-201ENST00000611980 203 ntBASIC1.91□□□□□ -2.1
NEDD4P46934 AL359851.1-201ENST00000569460 4997 ntBASIC1.91□□□□□ -2.1
NEDD4P46934 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
NEDD4P46934 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
NEDD4P46934 ZNF299P-201ENST00000406845 1804 ntBASIC1.91□□□□□ -2.1
NEDD4P46934 SNORA40.19-201ENST00000390846 128 ntBASIC1.91□□□□□ -2.1
NEDD4P46934 SNORA12-201ENST00000391162 147 ntBASIC1.91□□□□□ -2.1
NEDD4P46934 AC245102.2-201ENST00000448956 180 ntBASIC1.91□□□□□ -2.1
NEDD4P46934 AL137159.1-201ENST00000452808 512 ntBASIC1.91□□□□□ -2.1
NEDD4P46934 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.91□□□□□ -2.1
NEDD4P46934 SNORA4.4-201ENST00000515921 135 ntBASIC1.91□□□□□ -2.1
NEDD4P46934 RNU6-965P-201ENST00000516721 96 ntBASIC1.91□□□□□ -2.1
NEDD4P46934 AC105029.1-201ENST00000520250 669 ntBASIC1.91□□□□□ -2.1
NEDD4P46934 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms