Protein–RNA interactions for Protein: P35247

SFTPD, Pulmonary surfactant-associated protein D, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPDP35247 Y_RNA.451-201ENST00000384200 100 ntBASIC1.87□□□□□ -2.11
SFTPDP35247 Y_RNA.524-201ENST00000384564 100 ntBASIC1.87□□□□□ -2.11
SFTPDP35247 Y_RNA.561-201ENST00000384694 100 ntBASIC1.87□□□□□ -2.11
SFTPDP35247 SNORA40.19-201ENST00000390846 128 ntBASIC1.87□□□□□ -2.11
SFTPDP35247 RNU11-3P-201ENST00000391111 133 ntBASIC1.87□□□□□ -2.11
SFTPDP35247 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.87□□□□□ -2.11
SFTPDP35247 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.87□□□□□ -2.11
SFTPDP35247 RPS29P21-201ENST00000496272 170 ntBASIC1.87□□□□□ -2.11
SFTPDP35247 AC091951.2-201ENST00000500762 203 ntBASIC1.87□□□□□ -2.11
SFTPDP35247 IGLV3-17-201ENST00000519099 244 ntBASIC1.87□□□□□ -2.11
SFTPDP35247 AL590705.4-201ENST00000532209 134 ntBASIC1.87□□□□□ -2.11
SFTPDP35247 AL121579.1-201ENST00000555129 305 ntBASIC1.87□□□□□ -2.11
SFTPDP35247 AC026470.2-201ENST00000561492 181 ntBASIC1.87□□□□□ -2.11
SFTPDP35247 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.87□□□□□ -2.11
SFTPDP35247 UBE2V2P2-201ENST00000587677 504 ntBASIC1.87□□□□□ -2.11
SFTPDP35247 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.87□□□□□ -2.11
SFTPDP35247 AL590240.4-201ENST00000616908 390 ntBASIC1.87□□□□□ -2.11
SFTPDP35247 AC098657.3-201ENST00000620434 263 ntBASIC1.87□□□□□ -2.11
SFTPDP35247 AC099654.5-201ENST00000636479 350 ntBASIC1.87□□□□□ -2.11
SFTPDP35247 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SFTPDP35247 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SFTPDP35247 RNU1-58P-201ENST00000362413 163 ntBASIC1.86□□□□□ -2.11
SFTPDP35247 Y_RNA.142-201ENST00000363491 102 ntBASIC1.86□□□□□ -2.11
SFTPDP35247 RNA5SP493-201ENST00000364115 91 ntBASIC1.86□□□□□ -2.11
SFTPDP35247 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.86□□□□□ -2.11
SFTPDP35247 RNY3P14-201ENST00000384309 102 ntBASIC1.86□□□□□ -2.11
SFTPDP35247 SNORA51.11-201ENST00000384442 131 ntBASIC1.86□□□□□ -2.11
SFTPDP35247 MIR153-2-201ENST00000385225 87 ntBASIC1.86□□□□□ -2.11
SFTPDP35247 SNORA75.4-201ENST00000391278 119 ntBASIC1.86□□□□□ -2.11
SFTPDP35247 RNU6-1304P-201ENST00000411374 106 ntBASIC1.86□□□□□ -2.11
SFTPDP35247 AC139712.2-201ENST00000424302 339 ntBASIC1.86□□□□□ -2.11
SFTPDP35247 AC009237.7-201ENST00000447357 229 ntBASIC1.86□□□□□ -2.11
SFTPDP35247 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.86□□□□□ -2.11
SFTPDP35247 RN7SKP210-201ENST00000459176 261 ntBASIC1.86□□□□□ -2.11
SFTPDP35247 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.86□□□□□ -2.11
SFTPDP35247 AP005660.1-201ENST00000522972 293 ntBASIC1.86□□□□□ -2.11
SFTPDP35247 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.86□□□□□ -2.11
SFTPDP35247 MIR3169-201ENST00000578032 83 ntBASIC1.86□□□□□ -2.11
SFTPDP35247 MIR5701-3-201ENST00000578890 82 ntBASIC1.86□□□□□ -2.11
SFTPDP35247 MIR5701-1-201ENST00000585138 82 ntBASIC1.86□□□□□ -2.11
SFTPDP35247 AC007229.1-201ENST00000590455 412 ntBASIC1.86□□□□□ -2.11
SFTPDP35247 AL355802.3-201ENST00000607571 545 ntBASIC1.86□□□□□ -2.11
SFTPDP35247 Y_RNA.783-201ENST00000613546 102 ntBASIC1.86□□□□□ -2.11
SFTPDP35247 MIR5701-2-201ENST00000615634 82 ntBASIC1.86□□□□□ -2.11
SFTPDP35247 MIR219B-201ENST00000637023 88 ntBASIC1.86□□□□□ -2.11
SFTPDP35247 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.86□□□□□ -2.11
SFTPDP35247 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.86□□□□□ -2.11
SFTPDP35247 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.86□□□□□ -2.11
SFTPDP35247 LINC02555-201ENST00000563933 1951 ntBASIC1.86□□□□□ -2.11
SFTPDP35247 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
SFTPDP35247 RNA5SP276-201ENST00000362580 94 ntBASIC1.85□□□□□ -2.11
SFTPDP35247 Y_RNA.319-201ENST00000365138 92 ntBASIC1.85□□□□□ -2.11
SFTPDP35247 RNU6-1026P-201ENST00000384465 108 ntBASIC1.85□□□□□ -2.11
SFTPDP35247 RNU6-160P-201ENST00000384591 107 ntBASIC1.85□□□□□ -2.11
SFTPDP35247 AL355497.1-201ENST00000406262 551 ntBASIC1.85□□□□□ -2.11
SFTPDP35247 OOSP1P1-201ENST00000423265 274 ntBASIC1.85□□□□□ -2.11
SFTPDP35247 MTCO1P44-201ENST00000441935 243 ntBASIC1.85□□□□□ -2.11
SFTPDP35247 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.85□□□□□ -2.11
SFTPDP35247 Y_RNA.635-201ENST00000459041 101 ntBASIC1.85□□□□□ -2.11
SFTPDP35247 AC010531.2-201ENST00000465012 153 ntBASIC1.85□□□□□ -2.11
SFTPDP35247 RN7SL429P-201ENST00000479090 223 ntBASIC1.85□□□□□ -2.11
SFTPDP35247 RN7SL489P-201ENST00000486185 223 ntBASIC1.85□□□□□ -2.11
SFTPDP35247 RN7SL327P-201ENST00000488659 223 ntBASIC1.85□□□□□ -2.11
SFTPDP35247 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.85□□□□□ -2.11
SFTPDP35247 RNU7-175P-201ENST00000515915 61 ntBASIC1.85□□□□□ -2.11
SFTPDP35247 RNU6-507P-201ENST00000516045 100 ntBASIC1.85□□□□□ -2.11
SFTPDP35247 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.85□□□□□ -2.11
SFTPDP35247 UBL5P4-201ENST00000562584 236 ntBASIC1.85□□□□□ -2.11
SFTPDP35247 AC104581.2-201ENST00000572227 430 ntBASIC1.85□□□□□ -2.11
SFTPDP35247 MIR548S-201ENST00000581352 82 ntBASIC1.85□□□□□ -2.11
SFTPDP35247 MIR5002-201ENST00000584713 97 ntBASIC1.85□□□□□ -2.11
SFTPDP35247 SNRPGP20-201ENST00000604477 205 ntBASIC1.85□□□□□ -2.11
SFTPDP35247 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.85□□□□□ -2.11
SFTPDP35247 RN7SL853P-201ENST00000617250 223 ntBASIC1.85□□□□□ -2.11
SFTPDP35247 ZNF702P-202ENST00000434269 1966 ntBASIC1.85□□□□□ -2.11
SFTPDP35247 AC009487.4-201ENST00000624969 3585 ntBASIC1.84□□□□□ -2.11
SFTPDP35247 RNU4-52P-201ENST00000384209 138 ntBASIC1.84□□□□□ -2.11
SFTPDP35247 Y_RNA.490-201ENST00000384413 102 ntBASIC1.84□□□□□ -2.11
SFTPDP35247 MIR1283-1-201ENST00000408494 87 ntBASIC1.84□□□□□ -2.11
SFTPDP35247 RNU6-370P-201ENST00000411008 104 ntBASIC1.84□□□□□ -2.11
SFTPDP35247 AL139156.1-201ENST00000412785 841 ntBASIC1.84□□□□□ -2.11
SFTPDP35247 USMG5P1-201ENST00000425964 177 ntBASIC1.84□□□□□ -2.11
SFTPDP35247 AL353997.1-201ENST00000432936 108 ntBASIC1.84□□□□□ -2.11
SFTPDP35247 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.84□□□□□ -2.11
SFTPDP35247 RNU6-717P-201ENST00000459076 104 ntBASIC1.84□□□□□ -2.11
SFTPDP35247 RNU6-277P-201ENST00000516272 106 ntBASIC1.84□□□□□ -2.11
SFTPDP35247 SCARNA16.2-201ENST00000516520 172 ntBASIC1.84□□□□□ -2.11
SFTPDP35247 RNU1-40P-201ENST00000516816 164 ntBASIC1.84□□□□□ -2.11
SFTPDP35247 RNU1-97P-201ENST00000516872 164 ntBASIC1.84□□□□□ -2.11
SFTPDP35247 RNA5SP54-201ENST00000516951 92 ntBASIC1.84□□□□□ -2.11
SFTPDP35247 APOOP3-201ENST00000536787 586 ntBASIC1.84□□□□□ -2.11
SFTPDP35247 RRN3P3-201ENST00000549207 578 ntBASIC1.84□□□□□ -2.11
SFTPDP35247 AC002984.1-201ENST00000591692 448 ntBASIC1.84□□□□□ -2.11
SFTPDP35247 PISRT1.1-201ENST00000616930 107 ntBASIC1.84□□□□□ -2.11
SFTPDP35247 AC130454.1-201ENST00000622948 401 ntBASIC1.84□□□□□ -2.11
SFTPDP35247 AC022513.1-201ENST00000624512 117 ntBASIC1.84□□□□□ -2.11
SFTPDP35247 AL669831.3-213ENST00000636676 183 ntBASIC1.84□□□□□ -2.11
SFTPDP35247 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
SFTPDP35247 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
SFTPDP35247 RNU6-23P-201ENST00000363283 107 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms