Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
SMARCA1P28370 RNU6-137P-201ENST00000363680 108 ntBASIC2.98□□□□□ -1.93
SMARCA1P28370 RNU4-56P-201ENST00000364700 142 ntBASIC2.98□□□□□ -1.93
SMARCA1P28370 RNU6-318P-201ENST00000384283 103 ntBASIC2.98□□□□□ -1.93
SMARCA1P28370 RNU6-541P-201ENST00000384709 110 ntBASIC2.98□□□□□ -1.93
SMARCA1P28370 MIR196B-201ENST00000384852 84 ntBASIC2.98□□□□□ -1.93
SMARCA1P28370 MIR592-201ENST00000384959 97 ntBASIC2.98□□□□□ -1.93
SMARCA1P28370 RNU6-220P-201ENST00000390919 107 ntBASIC2.98□□□□□ -1.93
SMARCA1P28370 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SMARCA1P28370 RPS27AP9-201ENST00000477681 438 ntBASIC2.98□□□□□ -1.93
SMARCA1P28370 AC145146.1-201ENST00000496370 254 ntBASIC2.98□□□□□ -1.93
SMARCA1P28370 RNU6-1114P-201ENST00000516022 107 ntBASIC2.98□□□□□ -1.93
SMARCA1P28370 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.98□□□□□ -1.93
SMARCA1P28370 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.98□□□□□ -1.93
SMARCA1P28370 AL449363.1-201ENST00000617815 186 ntBASIC2.98□□□□□ -1.93
SMARCA1P28370 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.97□□□□□ -1.93
SMARCA1P28370 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SMARCA1P28370 Y_RNA.27-201ENST00000362540 103 ntBASIC2.97□□□□□ -1.93
SMARCA1P28370 RNU6-1301P-201ENST00000362724 104 ntBASIC2.97□□□□□ -1.93
SMARCA1P28370 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SMARCA1P28370 RNU6-281P-201ENST00000384212 103 ntBASIC2.97□□□□□ -1.93
SMARCA1P28370 MIR568-201ENST00000385036 95 ntBASIC2.97□□□□□ -1.93
SMARCA1P28370 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.97□□□□□ -1.93
SMARCA1P28370 DPH3P2-201ENST00000422618 250 ntBASIC2.97□□□□□ -1.93
SMARCA1P28370 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.97□□□□□ -1.93
SMARCA1P28370 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.97□□□□□ -1.93
SMARCA1P28370 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.97□□□□□ -1.93
SMARCA1P28370 AC096638.1-201ENST00000444678 216 ntBASIC2.97□□□□□ -1.93
SMARCA1P28370 AC073901.1-201ENST00000462471 408 ntBASIC2.97□□□□□ -1.93
SMARCA1P28370 AC007215.1-201ENST00000464893 276 ntBASIC2.97□□□□□ -1.93
SMARCA1P28370 AC140059.1-201ENST00000489238 361 ntBASIC2.97□□□□□ -1.93
SMARCA1P28370 MIR2355-201ENST00000517199 87 ntBASIC2.97□□□□□ -1.93
SMARCA1P28370 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.97□□□□□ -1.93
SMARCA1P28370 AC105245.1-201ENST00000581934 244 ntBASIC2.97□□□□□ -1.93
SMARCA1P28370 AC125232.2-201ENST00000592457 143 ntBASIC2.97□□□□□ -1.93
SMARCA1P28370 AL138963.2-201ENST00000605137 226 ntBASIC2.97□□□□□ -1.93
SMARCA1P28370 AL021879.1-201ENST00000611756 288 ntBASIC2.97□□□□□ -1.93
SMARCA1P28370 AC008121.3-201ENST00000618726 433 ntBASIC2.97□□□□□ -1.93
SMARCA1P28370 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.97□□□□□ -1.93
SMARCA1P28370 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SMARCA1P28370 RNY3P4-201ENST00000384428 101 ntBASIC2.96□□□□□ -1.94
SMARCA1P28370 Y_RNA.551-201ENST00000384661 102 ntBASIC2.96□□□□□ -1.94
SMARCA1P28370 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.96□□□□□ -1.94
SMARCA1P28370 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.96□□□□□ -1.94
SMARCA1P28370 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.96□□□□□ -1.94
SMARCA1P28370 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.96□□□□□ -1.94
SMARCA1P28370 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.96□□□□□ -1.94
SMARCA1P28370 RNU6-1198P-201ENST00000516904 67 ntBASIC2.96□□□□□ -1.94
SMARCA1P28370 AC091144.1-201ENST00000519573 138 ntBASIC2.96□□□□□ -1.94
SMARCA1P28370 AC131281.1-201ENST00000522984 164 ntBASIC2.96□□□□□ -1.94
SMARCA1P28370 AC027176.1-201ENST00000560204 514 ntBASIC2.96□□□□□ -1.94
SMARCA1P28370 AC008269.2-201ENST00000561915 1105 ntBASIC2.96□□□□□ -1.94
SMARCA1P28370 MIR4446-201ENST00000578505 67 ntBASIC2.96□□□□□ -1.94
SMARCA1P28370 MIR5695-201ENST00000579717 85 ntBASIC2.96□□□□□ -1.94
SMARCA1P28370 RPS29P30-201ENST00000600975 111 ntBASIC2.96□□□□□ -1.94
SMARCA1P28370 AL355297.3-201ENST00000604082 446 ntBASIC2.96□□□□□ -1.94
SMARCA1P28370 AC005296.1-201ENST00000616145 209 ntBASIC2.96□□□□□ -1.94
SMARCA1P28370 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.96□□□□□ -1.94
SMARCA1P28370 U6.92-201ENST00000636464 89 ntBASIC2.96□□□□□ -1.94
SMARCA1P28370 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
SMARCA1P28370 RNA5SP361-201ENST00000362686 118 ntBASIC2.95□□□□□ -1.94
SMARCA1P28370 RNA5SP456-201ENST00000364002 114 ntBASIC2.95□□□□□ -1.94
SMARCA1P28370 RNU6-879P-201ENST00000364328 108 ntBASIC2.95□□□□□ -1.94
SMARCA1P28370 Y_RNA.526-201ENST00000384572 110 ntBASIC2.95□□□□□ -1.94
SMARCA1P28370 RNU6-130P-201ENST00000411112 103 ntBASIC2.95□□□□□ -1.94
SMARCA1P28370 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.95□□□□□ -1.94
SMARCA1P28370 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.95□□□□□ -1.94
SMARCA1P28370 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.95□□□□□ -1.94
SMARCA1P28370 MRPS35P2-201ENST00000508242 191 ntBASIC2.95□□□□□ -1.94
SMARCA1P28370 EIF4A1P12-201ENST00000551910 141 ntBASIC2.95□□□□□ -1.94
SMARCA1P28370 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.95□□□□□ -1.94
SMARCA1P28370 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.95□□□□□ -1.94
SMARCA1P28370 AL390123.1-201ENST00000603216 237 ntBASIC2.95□□□□□ -1.94
SMARCA1P28370 RAC1P9-201ENST00000604990 392 ntBASIC2.95□□□□□ -1.94
SMARCA1P28370 MIR6817-201ENST00000615588 66 ntBASIC2.95□□□□□ -1.94
SMARCA1P28370 U4.3-201ENST00000621047 82 ntBASIC2.95□□□□□ -1.94
SMARCA1P28370 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
SMARCA1P28370 ZNF204P-201ENST00000416749 2397 ntBASIC2.95□□□□□ -1.94
SMARCA1P28370 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SMARCA1P28370 AC069528.2-201ENST00000624849 1991 ntBASIC2.94□□□□□ -1.94
SMARCA1P28370 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.94□□□□□ -1.94
SMARCA1P28370 AL136360.1-201ENST00000503377 1900 ntBASIC2.94□□□□□ -1.94
SMARCA1P28370 Y_RNA.210-201ENST00000364161 110 ntBASIC2.94□□□□□ -1.94
SMARCA1P28370 RNU4-50P-201ENST00000364361 141 ntBASIC2.94□□□□□ -1.94
SMARCA1P28370 Y_RNA.458-201ENST00000384240 102 ntBASIC2.94□□□□□ -1.94
SMARCA1P28370 SNORA46.1-201ENST00000391069 153 ntBASIC2.94□□□□□ -1.94
SMARCA1P28370 AC104389.3-201ENST00000445629 235 ntBASIC2.94□□□□□ -1.94
SMARCA1P28370 RNA5SP54-201ENST00000516951 92 ntBASIC2.94□□□□□ -1.94
SMARCA1P28370 AC034114.1-201ENST00000520293 285 ntBASIC2.94□□□□□ -1.94
SMARCA1P28370 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.94□□□□□ -1.94
SMARCA1P28370 AC023824.2-201ENST00000566185 400 ntBASIC2.94□□□□□ -1.94
SMARCA1P28370 AC090517.1-201ENST00000569307 266 ntBASIC2.94□□□□□ -1.94
SMARCA1P28370 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.94□□□□□ -1.94
SMARCA1P28370 BX322639.1-202ENST00000423987 2213 ntBASIC2.93□□□□□ -1.94
SMARCA1P28370 AC007336.1-201ENST00000576365 3828 ntBASIC2.93□□□□□ -1.94
SMARCA1P28370 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.93□□□□□ -1.94
SMARCA1P28370 RNU1-76P-201ENST00000362903 159 ntBASIC2.93□□□□□ -1.94
SMARCA1P28370 RNU6-873P-201ENST00000363833 107 ntBASIC2.93□□□□□ -1.94
SMARCA1P28370 Y_RNA.214-201ENST00000364201 112 ntBASIC2.93□□□□□ -1.94
SMARCA1P28370 SNORA63.7-201ENST00000365579 123 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms