Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 RNU6-1009P-201ENST00000390996 107 ntBASIC1.72□□□□□ -2.13
GDF1P27539 RNU2-32P-201ENST00000411193 191 ntBASIC1.72□□□□□ -2.13
GDF1P27539 RPS26P42-201ENST00000413485 326 ntBASIC1.72□□□□□ -2.13
GDF1P27539 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.72□□□□□ -2.13
GDF1P27539 snoU13.23-201ENST00000458863 104 ntBASIC1.72□□□□□ -2.13
GDF1P27539 Y_RNA.635-201ENST00000459041 101 ntBASIC1.72□□□□□ -2.13
GDF1P27539 AC087477.1-201ENST00000465747 340 ntBASIC1.72□□□□□ -2.13
GDF1P27539 CKS1BP2-201ENST00000497342 240 ntBASIC1.72□□□□□ -2.13
GDF1P27539 RPL23AP63-201ENST00000498752 471 ntBASIC1.72□□□□□ -2.13
GDF1P27539 AC108210.2-201ENST00000503681 201 ntBASIC1.72□□□□□ -2.13
GDF1P27539 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.72□□□□□ -2.13
GDF1P27539 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.72□□□□□ -2.13
GDF1P27539 MRPS17P9-201ENST00000511924 393 ntBASIC1.72□□□□□ -2.13
GDF1P27539 RNA5SP182-201ENST00000516064 82 ntBASIC1.72□□□□□ -2.13
GDF1P27539 RNU6-965P-201ENST00000516721 96 ntBASIC1.72□□□□□ -2.13
GDF1P27539 Y_RNA.708-201ENST00000516950 96 ntBASIC1.72□□□□□ -2.13
GDF1P27539 RNU6-548P-201ENST00000517083 115 ntBASIC1.72□□□□□ -2.13
GDF1P27539 DEFB131C-201ENST00000528817 165 ntBASIC1.72□□□□□ -2.13
GDF1P27539 CBX3P8-201ENST00000532412 525 ntBASIC1.72□□□□□ -2.13
GDF1P27539 AC022616.8-201ENST00000533569 253 ntBASIC1.72□□□□□ -2.13
GDF1P27539 APOOP3-201ENST00000536787 586 ntBASIC1.72□□□□□ -2.13
GDF1P27539 AC005014.2-201ENST00000607795 599 ntBASIC1.72□□□□□ -2.13
GDF1P27539 MIR6845-201ENST00000613182 61 ntBASIC1.72□□□□□ -2.13
GDF1P27539 AC025253.1-201ENST00000613623 543 ntBASIC1.72□□□□□ -2.13
GDF1P27539 MIR1248-201ENST00000629190 106 ntBASIC1.72□□□□□ -2.13
GDF1P27539 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
GDF1P27539 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.72□□□□□ -2.13
GDF1P27539 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
GDF1P27539 RNU6-546P-201ENST00000383991 107 ntBASIC1.71□□□□□ -2.14
GDF1P27539 MIR561-201ENST00000385216 97 ntBASIC1.71□□□□□ -2.14
GDF1P27539 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
GDF1P27539 SNORA75.4-201ENST00000391278 119 ntBASIC1.71□□□□□ -2.14
GDF1P27539 MIR208B-201ENST00000401172 77 ntBASIC1.71□□□□□ -2.14
GDF1P27539 AL512604.1-201ENST00000404812 257 ntBASIC1.71□□□□□ -2.14
GDF1P27539 RNA5SP494-201ENST00000410653 129 ntBASIC1.71□□□□□ -2.14
GDF1P27539 RNU6-370P-201ENST00000411008 104 ntBASIC1.71□□□□□ -2.14
GDF1P27539 RNU6-1304P-201ENST00000411374 106 ntBASIC1.71□□□□□ -2.14
GDF1P27539 CBX3P6-201ENST00000430257 527 ntBASIC1.71□□□□□ -2.14
GDF1P27539 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.71□□□□□ -2.14
GDF1P27539 AC003989.2-201ENST00000440224 169 ntBASIC1.71□□□□□ -2.14
GDF1P27539 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.71□□□□□ -2.14
GDF1P27539 RPL30P10-201ENST00000488148 337 ntBASIC1.71□□□□□ -2.14
GDF1P27539 MIR449C-201ENST00000516047 92 ntBASIC1.71□□□□□ -2.14
GDF1P27539 RNU6-567P-201ENST00000516746 107 ntBASIC1.71□□□□□ -2.14
GDF1P27539 RNU2-44P-201ENST00000516795 194 ntBASIC1.71□□□□□ -2.14
GDF1P27539 AC034114.1-201ENST00000520293 285 ntBASIC1.71□□□□□ -2.14
GDF1P27539 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.71□□□□□ -2.14
GDF1P27539 EIF4A1P12-201ENST00000551910 141 ntBASIC1.71□□□□□ -2.14
GDF1P27539 AL109918.3-201ENST00000603072 338 ntBASIC1.71□□□□□ -2.14
GDF1P27539 AC113139.1-201ENST00000605049 239 ntBASIC1.71□□□□□ -2.14
GDF1P27539 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.71□□□□□ -2.14
GDF1P27539 AC022202.1-201ENST00000613515 211 ntBASIC1.71□□□□□ -2.14
GDF1P27539 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.71□□□□□ -2.14
GDF1P27539 AL669831.3-213ENST00000636676 183 ntBASIC1.71□□□□□ -2.14
GDF1P27539 AC112487.2-201ENST00000637950 304 ntBASIC1.71□□□□□ -2.14
GDF1P27539 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.71□□□□□ -2.14
GDF1P27539 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
GDF1P27539 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.7□□□□□ -2.14
GDF1P27539 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
GDF1P27539 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
GDF1P27539 RNU6-1188P-201ENST00000363795 107 ntBASIC1.7□□□□□ -2.14
GDF1P27539 U3.9-201ENST00000363823 204 ntBASIC1.7□□□□□ -2.14
GDF1P27539 RNU6-595P-201ENST00000363944 107 ntBASIC1.7□□□□□ -2.14
GDF1P27539 RNU4-56P-201ENST00000364700 142 ntBASIC1.7□□□□□ -2.14
GDF1P27539 RNU6-331P-201ENST00000384724 107 ntBASIC1.7□□□□□ -2.14
GDF1P27539 MIR764-201ENST00000390811 85 ntBASIC1.7□□□□□ -2.14
GDF1P27539 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.7□□□□□ -2.14
GDF1P27539 AC009238.1-201ENST00000442165 424 ntBASIC1.7□□□□□ -2.14
GDF1P27539 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.7□□□□□ -2.14
GDF1P27539 AC009237.6-201ENST00000446969 424 ntBASIC1.7□□□□□ -2.14
GDF1P27539 AC107032.1-201ENST00000485945 480 ntBASIC1.7□□□□□ -2.14
GDF1P27539 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.7□□□□□ -2.14
GDF1P27539 RNU6-667P-201ENST00000517186 102 ntBASIC1.7□□□□□ -2.14
GDF1P27539 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.7□□□□□ -2.14
GDF1P27539 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
GDF1P27539 NDUFA5P6-201ENST00000542110 379 ntBASIC1.7□□□□□ -2.14
GDF1P27539 AC093027.1-201ENST00000546698 429 ntBASIC1.7□□□□□ -2.14
GDF1P27539 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.7□□□□□ -2.14
GDF1P27539 MIR5701-3-201ENST00000578890 82 ntBASIC1.7□□□□□ -2.14
GDF1P27539 MIR4273-201ENST00000582824 84 ntBASIC1.7□□□□□ -2.14
GDF1P27539 MIR5701-1-201ENST00000585138 82 ntBASIC1.7□□□□□ -2.14
GDF1P27539 AC025754.2-201ENST00000606491 432 ntBASIC1.7□□□□□ -2.14
GDF1P27539 MIR5701-2-201ENST00000615634 82 ntBASIC1.7□□□□□ -2.14
GDF1P27539 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
GDF1P27539 MIR1302-1-201ENST00000637932 143 ntBASIC1.7□□□□□ -2.14
GDF1P27539 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
GDF1P27539 ZNF299P-201ENST00000406845 1804 ntBASIC1.7□□□□□ -2.14
GDF1P27539 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.69□□□□□ -2.14
GDF1P27539 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
GDF1P27539 RNU4-9P-201ENST00000364951 139 ntBASIC1.69□□□□□ -2.14
GDF1P27539 RNA5SP138-201ENST00000365098 114 ntBASIC1.69□□□□□ -2.14
GDF1P27539 SNORD116-29-201ENST00000384516 83 ntBASIC1.69□□□□□ -2.14
GDF1P27539 RNU6-310P-201ENST00000384655 107 ntBASIC1.69□□□□□ -2.14
GDF1P27539 MIR549A-201ENST00000385268 96 ntBASIC1.69□□□□□ -2.14
GDF1P27539 RNU6-1093P-201ENST00000391194 107 ntBASIC1.69□□□□□ -2.14
GDF1P27539 RNA5SP338-201ENST00000410495 85 ntBASIC1.69□□□□□ -2.14
GDF1P27539 Y_RNA.646-201ENST00000410980 101 ntBASIC1.69□□□□□ -2.14
GDF1P27539 RNU2-41P-201ENST00000410991 178 ntBASIC1.69□□□□□ -2.14
GDF1P27539 AL590556.1-201ENST00000423231 483 ntBASIC1.69□□□□□ -2.14
GDF1P27539 HMGN2P19-201ENST00000425149 265 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms