Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 AL356218.2-201ENST00000605264 187 ntBASIC3.23□□□□□ -1.89
VAMP1P23763 AC005828.6-201ENST00000606610 232 ntBASIC3.23□□□□□ -1.89
VAMP1P23763 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.23□□□□□ -1.89
VAMP1P23763 AC108206.1-201ENST00000570186 4159 ntBASIC3.23□□□□□ -1.89
VAMP1P23763 AC093908.1-201ENST00000623125 8092 ntBASIC3.23□□□□□ -1.89
VAMP1P23763 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VAMP1P23763 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
VAMP1P23763 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
VAMP1P23763 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.22□□□□□ -1.89
VAMP1P23763 Y_RNA.124-201ENST00000363339 93 ntBASIC3.22□□□□□ -1.89
VAMP1P23763 RNA5SP399-201ENST00000364003 117 ntBASIC3.22□□□□□ -1.89
VAMP1P23763 RNU4-13P-201ENST00000364019 141 ntBASIC3.22□□□□□ -1.89
VAMP1P23763 RNU6-417P-201ENST00000384712 107 ntBASIC3.22□□□□□ -1.89
VAMP1P23763 RNU11-5P-201ENST00000391216 129 ntBASIC3.22□□□□□ -1.89
VAMP1P23763 RNU6-1186P-201ENST00000410429 97 ntBASIC3.22□□□□□ -1.89
VAMP1P23763 AC016909.1-201ENST00000415916 166 ntBASIC3.22□□□□□ -1.89
VAMP1P23763 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.22□□□□□ -1.89
VAMP1P23763 BTF3P11-201ENST00000426582 477 ntBASIC3.22□□□□□ -1.89
VAMP1P23763 RPS26P55-201ENST00000471178 356 ntBASIC3.22□□□□□ -1.89
VAMP1P23763 RN7SL860P-201ENST00000473738 223 ntBASIC3.22□□□□□ -1.89
VAMP1P23763 RN7SL604P-201ENST00000492589 296 ntBASIC3.22□□□□□ -1.89
VAMP1P23763 RNU6-1278P-201ENST00000516130 107 ntBASIC3.22□□□□□ -1.89
VAMP1P23763 RNU6-111P-201ENST00000517179 105 ntBASIC3.22□□□□□ -1.89
VAMP1P23763 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.22□□□□□ -1.89
VAMP1P23763 AP005660.1-201ENST00000522972 293 ntBASIC3.22□□□□□ -1.89
VAMP1P23763 AC087441.2-201ENST00000529141 262 ntBASIC3.22□□□□□ -1.89
VAMP1P23763 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
VAMP1P23763 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
VAMP1P23763 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
VAMP1P23763 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
VAMP1P23763 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
VAMP1P23763 AL161431.1-201ENST00000618966 4205 ntBASIC3.21□□□□□ -1.9
VAMP1P23763 snoU2-30.2-201ENST00000362805 70 ntBASIC3.21□□□□□ -1.9
VAMP1P23763 RNU6-338P-201ENST00000383888 105 ntBASIC3.21□□□□□ -1.9
VAMP1P23763 RNU6-376P-201ENST00000384731 106 ntBASIC3.21□□□□□ -1.9
VAMP1P23763 MIR585-201ENST00000384887 94 ntBASIC3.21□□□□□ -1.9
VAMP1P23763 MIR1178-201ENST00000408396 91 ntBASIC3.21□□□□□ -1.9
VAMP1P23763 SNORA11.4-201ENST00000408823 129 ntBASIC3.21□□□□□ -1.9
VAMP1P23763 RPS15AP28-201ENST00000435088 386 ntBASIC3.21□□□□□ -1.9
VAMP1P23763 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.21□□□□□ -1.9
VAMP1P23763 AC099522.1-202ENST00000514718 367 ntBASIC3.21□□□□□ -1.9
VAMP1P23763 RNU4-71P-201ENST00000516258 113 ntBASIC3.21□□□□□ -1.9
VAMP1P23763 AC044860.2-201ENST00000561005 179 ntBASIC3.21□□□□□ -1.9
VAMP1P23763 MIR7155-201ENST00000615925 56 ntBASIC3.21□□□□□ -1.9
VAMP1P23763 AC141273.2-201ENST00000618989 130 ntBASIC3.21□□□□□ -1.9
VAMP1P23763 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
VAMP1P23763 AL513302.2-201ENST00000562313 1842 ntBASIC3.21□□□□□ -1.9
VAMP1P23763 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
VAMP1P23763 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.2□□□□□ -1.9
VAMP1P23763 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
VAMP1P23763 UBE2WP1-201ENST00000362030 340 ntBASIC3.2□□□□□ -1.9
VAMP1P23763 Y_RNA.117-201ENST00000363294 101 ntBASIC3.2□□□□□ -1.9
VAMP1P23763 RNA5SP493-201ENST00000364115 91 ntBASIC3.2□□□□□ -1.9
VAMP1P23763 SNORD114-6-201ENST00000364393 72 ntBASIC3.2□□□□□ -1.9
VAMP1P23763 Y_RNA.257-201ENST00000364596 102 ntBASIC3.2□□□□□ -1.9
VAMP1P23763 MIR518C-201ENST00000384822 101 ntBASIC3.2□□□□□ -1.9
VAMP1P23763 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.2□□□□□ -1.9
VAMP1P23763 YWHAEP4-201ENST00000505390 198 ntBASIC3.2□□□□□ -1.9
VAMP1P23763 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.2□□□□□ -1.9
VAMP1P23763 RNA5SP385-201ENST00000515947 110 ntBASIC3.2□□□□□ -1.9
VAMP1P23763 RN7SKP21-201ENST00000516503 220 ntBASIC3.2□□□□□ -1.9
VAMP1P23763 RNA5SP137-201ENST00000516833 135 ntBASIC3.2□□□□□ -1.9
VAMP1P23763 MIR4738-201ENST00000579134 87 ntBASIC3.2□□□□□ -1.9
VAMP1P23763 MIR4506-201ENST00000584693 77 ntBASIC3.2□□□□□ -1.9
VAMP1P23763 YPEL5P2-201ENST00000605553 359 ntBASIC3.2□□□□□ -1.9
VAMP1P23763 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.2□□□□□ -1.9
VAMP1P23763 MIR7151-201ENST00000617477 60 ntBASIC3.2□□□□□ -1.9
VAMP1P23763 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.2□□□□□ -1.9
VAMP1P23763 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
VAMP1P23763 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
VAMP1P23763 Y_RNA.287-201ENST00000364853 94 ntBASIC3.19□□□□□ -1.9
VAMP1P23763 RNA5SP87-201ENST00000384155 118 ntBASIC3.19□□□□□ -1.9
VAMP1P23763 Y_RNA.456-201ENST00000384232 111 ntBASIC3.19□□□□□ -1.9
VAMP1P23763 RNU11-3P-201ENST00000391111 133 ntBASIC3.19□□□□□ -1.9
VAMP1P23763 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.19□□□□□ -1.9
VAMP1P23763 BX510359.3-201ENST00000422168 306 ntBASIC3.19□□□□□ -1.9
VAMP1P23763 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.19□□□□□ -1.9
VAMP1P23763 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.19□□□□□ -1.9
VAMP1P23763 RPL7P49-201ENST00000471402 708 ntBASIC3.19□□□□□ -1.9
VAMP1P23763 MTND1P19-201ENST00000511780 315 ntBASIC3.19□□□□□ -1.9
VAMP1P23763 RNU6-1337P-201ENST00000516525 95 ntBASIC3.19□□□□□ -1.9
VAMP1P23763 RNU7-172P-201ENST00000517125 64 ntBASIC3.19□□□□□ -1.9
VAMP1P23763 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.19□□□□□ -1.9
VAMP1P23763 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.19□□□□□ -1.9
VAMP1P23763 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
VAMP1P23763 AC007229.1-201ENST00000590455 412 ntBASIC3.19□□□□□ -1.9
VAMP1P23763 AL137849.1-201ENST00000604767 169 ntBASIC3.19□□□□□ -1.9
VAMP1P23763 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VAMP1P23763 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.19□□□□□ -1.9
VAMP1P23763 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VAMP1P23763 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
VAMP1P23763 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VAMP1P23763 MIR340-201ENST00000362125 95 ntBASIC3.18□□□□□ -1.9
VAMP1P23763 RNA5SP443-201ENST00000363083 132 ntBASIC3.18□□□□□ -1.9
VAMP1P23763 MIR129-1-201ENST00000384972 72 ntBASIC3.18□□□□□ -1.9
VAMP1P23763 OOSP1P1-201ENST00000423265 274 ntBASIC3.18□□□□□ -1.9
VAMP1P23763 AC108059.2-201ENST00000434626 151 ntBASIC3.18□□□□□ -1.9
VAMP1P23763 AL353689.1-201ENST00000438895 199 ntBASIC3.18□□□□□ -1.9
VAMP1P23763 HSPE1P13-201ENST00000451143 297 ntBASIC3.18□□□□□ -1.9
VAMP1P23763 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms