Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.84□□□□□ -1.79
LMNB1P20700 UQCRBP2-201ENST00000447827 297 ntBASIC3.84□□□□□ -1.79
LMNB1P20700 AL109933.2-201ENST00000452651 260 ntBASIC3.84□□□□□ -1.79
LMNB1P20700 AP001324.2-201ENST00000461163 319 ntBASIC3.84□□□□□ -1.79
LMNB1P20700 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.84□□□□□ -1.79
LMNB1P20700 AP002884.2-201ENST00000471647 395 ntBASIC3.84□□□□□ -1.79
LMNB1P20700 TRBV12-1-201ENST00000479785 344 ntBASIC3.84□□□□□ -1.79
LMNB1P20700 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.84□□□□□ -1.79
LMNB1P20700 AC022559.1-201ENST00000520905 205 ntBASIC3.84□□□□□ -1.79
LMNB1P20700 AC105137.2-201ENST00000569073 466 ntBASIC3.84□□□□□ -1.79
LMNB1P20700 MIR4282-201ENST00000583613 67 ntBASIC3.84□□□□□ -1.79
LMNB1P20700 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.84□□□□□ -1.79
LMNB1P20700 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.84□□□□□ -1.79
LMNB1P20700 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.83□□□□□ -1.8
LMNB1P20700 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.83□□□□□ -1.8
LMNB1P20700 AC017071.1-201ENST00000564407 2204 ntBASIC3.83□□□□□ -1.8
LMNB1P20700 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LMNB1P20700 UBE2WP1-201ENST00000362030 340 ntBASIC3.83□□□□□ -1.8
LMNB1P20700 RNU4-15P-201ENST00000362613 141 ntBASIC3.83□□□□□ -1.8
LMNB1P20700 RNU6-1010P-201ENST00000362757 107 ntBASIC3.83□□□□□ -1.8
LMNB1P20700 Y_RNA.136-201ENST00000363444 102 ntBASIC3.83□□□□□ -1.8
LMNB1P20700 SNORD15B-201ENST00000384714 146 ntBASIC3.83□□□□□ -1.8
LMNB1P20700 AL512633.1-201ENST00000399931 655 ntBASIC3.83□□□□□ -1.8
LMNB1P20700 RNU6-1077P-201ENST00000410506 102 ntBASIC3.83□□□□□ -1.8
LMNB1P20700 RNA5SP229-201ENST00000410809 99 ntBASIC3.83□□□□□ -1.8
LMNB1P20700 RNA5SP508-201ENST00000411327 119 ntBASIC3.83□□□□□ -1.8
LMNB1P20700 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.83□□□□□ -1.8
LMNB1P20700 POLR2KP2-201ENST00000438155 177 ntBASIC3.83□□□□□ -1.8
LMNB1P20700 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.83□□□□□ -1.8
LMNB1P20700 IFNA11P-201ENST00000446352 526 ntBASIC3.83□□□□□ -1.8
LMNB1P20700 snoU13.14-201ENST00000459372 104 ntBASIC3.83□□□□□ -1.8
LMNB1P20700 Y_RNA.638-201ENST00000459374 113 ntBASIC3.83□□□□□ -1.8
LMNB1P20700 DEFB131C-201ENST00000528817 165 ntBASIC3.83□□□□□ -1.8
LMNB1P20700 TGIF1P1-201ENST00000558095 802 ntBASIC3.83□□□□□ -1.8
LMNB1P20700 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.83□□□□□ -1.8
LMNB1P20700 MIR3145-201ENST00000580727 82 ntBASIC3.83□□□□□ -1.8
LMNB1P20700 AL391813.1-201ENST00000603098 260 ntBASIC3.83□□□□□ -1.8
LMNB1P20700 AC037487.3-201ENST00000606668 112 ntBASIC3.83□□□□□ -1.8
LMNB1P20700 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.83□□□□□ -1.8
LMNB1P20700 AC091932.3-201ENST00000624223 323 ntBASIC3.83□□□□□ -1.8
LMNB1P20700 SNORA50A-202ENST00000629536 136 ntBASIC3.83□□□□□ -1.8
LMNB1P20700 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.83□□□□□ -1.8
LMNB1P20700 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
LMNB1P20700 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.83□□□□□ -1.8
LMNB1P20700 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
LMNB1P20700 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
LMNB1P20700 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
LMNB1P20700 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LMNB1P20700 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.82□□□□□ -1.8
LMNB1P20700 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.82□□□□□ -1.8
LMNB1P20700 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
LMNB1P20700 RNU6-682P-201ENST00000363843 106 ntBASIC3.82□□□□□ -1.8
LMNB1P20700 RNU1-101P-201ENST00000391171 127 ntBASIC3.82□□□□□ -1.8
LMNB1P20700 AL390729.2-201ENST00000416137 156 ntBASIC3.82□□□□□ -1.8
LMNB1P20700 AL365496.1-201ENST00000426885 215 ntBASIC3.82□□□□□ -1.8
LMNB1P20700 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.82□□□□□ -1.8
LMNB1P20700 EEF1B2P7-201ENST00000451177 676 ntBASIC3.82□□□□□ -1.8
LMNB1P20700 RNU7-120P-201ENST00000459334 63 ntBASIC3.82□□□□□ -1.8
LMNB1P20700 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.82□□□□□ -1.8
LMNB1P20700 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.82□□□□□ -1.8
LMNB1P20700 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.82□□□□□ -1.8
LMNB1P20700 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.82□□□□□ -1.8
LMNB1P20700 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.82□□□□□ -1.8
LMNB1P20700 RNU6-91P-201ENST00000607774 107 ntBASIC3.82□□□□□ -1.8
LMNB1P20700 PCGEM1.1-201ENST00000613431 131 ntBASIC3.82□□□□□ -1.8
LMNB1P20700 uc_338.25-201ENST00000613756 156 ntBASIC3.82□□□□□ -1.8
LMNB1P20700 AC004467.1-201ENST00000615678 330 ntBASIC3.82□□□□□ -1.8
LMNB1P20700 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.82□□□□□ -1.8
LMNB1P20700 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.82□□□□□ -1.8
LMNB1P20700 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LMNB1P20700 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LMNB1P20700 AC099654.7-201ENST00000635788 2127 ntBASIC3.82□□□□□ -1.8
LMNB1P20700 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
LMNB1P20700 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LMNB1P20700 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.81□□□□□ -1.8
LMNB1P20700 RNU6-774P-201ENST00000363238 107 ntBASIC3.81□□□□□ -1.8
LMNB1P20700 RNU6-245P-201ENST00000384020 107 ntBASIC3.81□□□□□ -1.8
LMNB1P20700 RNU6-662P-201ENST00000384253 104 ntBASIC3.81□□□□□ -1.8
LMNB1P20700 RNU6-1289P-201ENST00000384431 106 ntBASIC3.81□□□□□ -1.8
LMNB1P20700 MIR147B-201ENST00000390185 80 ntBASIC3.81□□□□□ -1.8
LMNB1P20700 MIR548M-201ENST00000408260 86 ntBASIC3.81□□□□□ -1.8
LMNB1P20700 RNU2-61P-201ENST00000411069 191 ntBASIC3.81□□□□□ -1.8
LMNB1P20700 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.81□□□□□ -1.8
LMNB1P20700 TRIAP1P1-201ENST00000427062 225 ntBASIC3.81□□□□□ -1.8
LMNB1P20700 AC104332.1-201ENST00000440471 797 ntBASIC3.81□□□□□ -1.8
LMNB1P20700 SNORA31.1-201ENST00000515993 133 ntBASIC3.81□□□□□ -1.8
LMNB1P20700 SNORA31.5-201ENST00000516190 133 ntBASIC3.81□□□□□ -1.8
LMNB1P20700 SNORA27.4-201ENST00000516650 95 ntBASIC3.81□□□□□ -1.8
LMNB1P20700 AP002392.1-201ENST00000537692 208 ntBASIC3.81□□□□□ -1.8
LMNB1P20700 MIR3923-201ENST00000579521 83 ntBASIC3.81□□□□□ -1.8
LMNB1P20700 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.81□□□□□ -1.8
LMNB1P20700 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LMNB1P20700 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LMNB1P20700 AC007496.3-201ENST00000624987 3443 ntBASIC3.8□□□□□ -1.8
LMNB1P20700 MAPK10-322ENST00000641485 4530 ntBASIC3.8□□□□□ -1.8
LMNB1P20700 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
LMNB1P20700 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
LMNB1P20700 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.8□□□□□ -1.8
LMNB1P20700 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
LMNB1P20700 Y_RNA.82-201ENST00000363000 102 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms