Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 MIR6875-201ENST00000617506 72 ntBASIC3.72□□□□□ -1.81
NID1P14543 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NID1P14543 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
NID1P14543 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NID1P14543 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.71□□□□□ -1.82
NID1P14543 DYNLT3P1-201ENST00000378574 347 ntBASIC3.71□□□□□ -1.82
NID1P14543 RNA5SP39-201ENST00000411245 120 ntBASIC3.71□□□□□ -1.82
NID1P14543 VDAC1P3-201ENST00000434069 851 ntBASIC3.71□□□□□ -1.82
NID1P14543 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.71□□□□□ -1.82
NID1P14543 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.71□□□□□ -1.82
NID1P14543 AL162151.2-201ENST00000448875 158 ntBASIC3.71□□□□□ -1.82
NID1P14543 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.71□□□□□ -1.82
NID1P14543 RPS26P55-201ENST00000471178 356 ntBASIC3.71□□□□□ -1.82
NID1P14543 SNORD19.2-201ENST00000516978 73 ntBASIC3.71□□□□□ -1.82
NID1P14543 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.71□□□□□ -1.82
NID1P14543 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.71□□□□□ -1.82
NID1P14543 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.71□□□□□ -1.82
NID1P14543 HMGN2P15-201ENST00000585707 270 ntBASIC3.71□□□□□ -1.82
NID1P14543 AL022345.2-201ENST00000606307 135 ntBASIC3.71□□□□□ -1.82
NID1P14543 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.71□□□□□ -1.82
NID1P14543 MIR6867-201ENST00000610636 67 ntBASIC3.71□□□□□ -1.82
NID1P14543 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
NID1P14543 MIR4727-201ENST00000622232 55 ntBASIC3.71□□□□□ -1.82
NID1P14543 Z82217.1-201ENST00000625157 8149 ntBASIC3.71□□□□□ -1.82
NID1P14543 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NID1P14543 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
NID1P14543 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NID1P14543 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NID1P14543 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
NID1P14543 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NID1P14543 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.7□□□□□ -1.82
NID1P14543 LINC02471-203ENST00000641941 4752 ntBASIC3.7□□□□□ -1.82
NID1P14543 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NID1P14543 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
NID1P14543 RNU6-756P-201ENST00000383997 107 ntBASIC3.7□□□□□ -1.82
NID1P14543 SNORA11.1-201ENST00000408133 129 ntBASIC3.7□□□□□ -1.82
NID1P14543 AP000873.1-201ENST00000463987 400 ntBASIC3.7□□□□□ -1.82
NID1P14543 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.7□□□□□ -1.82
NID1P14543 SNORA18.4-201ENST00000516440 124 ntBASIC3.7□□□□□ -1.82
NID1P14543 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.7□□□□□ -1.82
NID1P14543 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.7□□□□□ -1.82
NID1P14543 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.7□□□□□ -1.82
NID1P14543 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.7□□□□□ -1.82
NID1P14543 AC091152.3-201ENST00000604227 325 ntBASIC3.7□□□□□ -1.82
NID1P14543 RPL17P51-201ENST00000605218 238 ntBASIC3.7□□□□□ -1.82
NID1P14543 AP001318.4-201ENST00000616637 121 ntBASIC3.7□□□□□ -1.82
NID1P14543 AC069528.2-201ENST00000624849 1991 ntBASIC3.7□□□□□ -1.82
NID1P14543 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NID1P14543 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
NID1P14543 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NID1P14543 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
NID1P14543 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
NID1P14543 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NID1P14543 AC026241.1-201ENST00000517873 2142 ntBASIC3.7□□□□□ -1.82
NID1P14543 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
NID1P14543 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NID1P14543 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.69□□□□□ -1.82
NID1P14543 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NID1P14543 MIR208A-201ENST00000362287 71 ntBASIC3.69□□□□□ -1.82
NID1P14543 SNORA27.1-201ENST00000362604 124 ntBASIC3.69□□□□□ -1.82
NID1P14543 RNU6-1210P-201ENST00000363775 107 ntBASIC3.69□□□□□ -1.82
NID1P14543 Y_RNA.634-201ENST00000364811 113 ntBASIC3.69□□□□□ -1.82
NID1P14543 RNU6-1131P-201ENST00000364955 107 ntBASIC3.69□□□□□ -1.82
NID1P14543 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NID1P14543 RNA5SP129-201ENST00000410276 118 ntBASIC3.69□□□□□ -1.82
NID1P14543 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.69□□□□□ -1.82
NID1P14543 MTATP6P21-201ENST00000440681 189 ntBASIC3.69□□□□□ -1.82
NID1P14543 SNRPGP5-201ENST00000456003 220 ntBASIC3.69□□□□□ -1.82
NID1P14543 AC078817.1-201ENST00000492623 435 ntBASIC3.69□□□□□ -1.82
NID1P14543 AC083906.5-201ENST00000503722 328 ntBASIC3.69□□□□□ -1.82
NID1P14543 RNU6-762P-201ENST00000517107 102 ntBASIC3.69□□□□□ -1.82
NID1P14543 RNU1-104P-201ENST00000517280 175 ntBASIC3.69□□□□□ -1.82
NID1P14543 AC012493.2-201ENST00000595083 291 ntBASIC3.69□□□□□ -1.82
NID1P14543 AC097639.2-201ENST00000603159 172 ntBASIC3.69□□□□□ -1.82
NID1P14543 uc_338.32-201ENST00000615087 172 ntBASIC3.69□□□□□ -1.82
NID1P14543 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.69□□□□□ -1.82
NID1P14543 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
NID1P14543 IPO8P1-201ENST00000455509 3109 ntBASIC3.69□□□□□ -1.82
NID1P14543 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NID1P14543 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
NID1P14543 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NID1P14543 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
NID1P14543 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NID1P14543 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.68□□□□□ -1.82
NID1P14543 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.68□□□□□ -1.82
NID1P14543 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
NID1P14543 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.68□□□□□ -1.82
NID1P14543 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.68□□□□□ -1.82
NID1P14543 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.68□□□□□ -1.82
NID1P14543 AL356292.1-201ENST00000283110 373 ntBASIC3.68□□□□□ -1.82
NID1P14543 Y_RNA.52-201ENST00000362760 96 ntBASIC3.68□□□□□ -1.82
NID1P14543 RNU6-655P-201ENST00000362858 107 ntBASIC3.68□□□□□ -1.82
NID1P14543 Y_RNA.91-201ENST00000363042 107 ntBASIC3.68□□□□□ -1.82
NID1P14543 RNA5SP130-201ENST00000364431 114 ntBASIC3.68□□□□□ -1.82
NID1P14543 Y_RNA.328-201ENST00000365208 113 ntBASIC3.68□□□□□ -1.82
NID1P14543 Y_RNA.333-201ENST00000365274 102 ntBASIC3.68□□□□□ -1.82
NID1P14543 RNA5SP167-201ENST00000365461 116 ntBASIC3.68□□□□□ -1.82
NID1P14543 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
NID1P14543 SNORA26-201ENST00000391286 122 ntBASIC3.68□□□□□ -1.82
NID1P14543 RPL21P65-201ENST00000406094 466 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms