Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 ZNF204P-201ENST00000416749 2397 ntBASIC2.22□□□□□ -2.05
HLA-DOBP13765 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.05
HLA-DOBP13765 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.05
HLA-DOBP13765 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.21□□□□□ -2.06
HLA-DOBP13765 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
HLA-DOBP13765 RNU6-1301P-201ENST00000362724 104 ntBASIC2.21□□□□□ -2.06
HLA-DOBP13765 RNU1-76P-201ENST00000362903 159 ntBASIC2.21□□□□□ -2.06
HLA-DOBP13765 RNU6-873P-201ENST00000363833 107 ntBASIC2.21□□□□□ -2.06
HLA-DOBP13765 RNA5SP456-201ENST00000364002 114 ntBASIC2.21□□□□□ -2.06
HLA-DOBP13765 SNORD56.5-201ENST00000364281 72 ntBASIC2.21□□□□□ -2.06
HLA-DOBP13765 RNU6-879P-201ENST00000364328 108 ntBASIC2.21□□□□□ -2.06
HLA-DOBP13765 DEFA7P-201ENST00000382676 285 ntBASIC2.21□□□□□ -2.06
HLA-DOBP13765 RNU6-281P-201ENST00000384212 103 ntBASIC2.21□□□□□ -2.06
HLA-DOBP13765 Y_RNA.459-201ENST00000384251 102 ntBASIC2.21□□□□□ -2.06
HLA-DOBP13765 SNORA51.11-201ENST00000384442 131 ntBASIC2.21□□□□□ -2.06
HLA-DOBP13765 Y_RNA.551-201ENST00000384661 102 ntBASIC2.21□□□□□ -2.06
HLA-DOBP13765 MIR1252-201ENST00000408861 65 ntBASIC2.21□□□□□ -2.06
HLA-DOBP13765 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.21□□□□□ -2.06
HLA-DOBP13765 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.21□□□□□ -2.06
HLA-DOBP13765 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.21□□□□□ -2.06
HLA-DOBP13765 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.21□□□□□ -2.06
HLA-DOBP13765 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.21□□□□□ -2.06
HLA-DOBP13765 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.21□□□□□ -2.06
HLA-DOBP13765 Y_RNA.715-201ENST00000517082 110 ntBASIC2.21□□□□□ -2.06
HLA-DOBP13765 AC093023.1-201ENST00000547375 507 ntBASIC2.21□□□□□ -2.06
HLA-DOBP13765 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.21□□□□□ -2.06
HLA-DOBP13765 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.21□□□□□ -2.06
HLA-DOBP13765 AL356280.1-201ENST00000603614 379 ntBASIC2.21□□□□□ -2.06
HLA-DOBP13765 AL355297.3-201ENST00000604082 446 ntBASIC2.21□□□□□ -2.06
HLA-DOBP13765 AL162730.1-201ENST00000605734 292 ntBASIC2.21□□□□□ -2.06
HLA-DOBP13765 MIR6817-201ENST00000615588 66 ntBASIC2.21□□□□□ -2.06
HLA-DOBP13765 MAPK10-266ENST00000641066 6555 ntBASIC2.21□□□□□ -2.06
HLA-DOBP13765 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.2□□□□□ -2.06
HLA-DOBP13765 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
HLA-DOBP13765 Y_RNA.152-201ENST00000363578 100 ntBASIC2.2□□□□□ -2.06
HLA-DOBP13765 RNA5SP68-201ENST00000363885 119 ntBASIC2.2□□□□□ -2.06
HLA-DOBP13765 SNORD32B-201ENST00000364460 84 ntBASIC2.2□□□□□ -2.06
HLA-DOBP13765 RNU6-450P-201ENST00000364654 107 ntBASIC2.2□□□□□ -2.06
HLA-DOBP13765 SET-203ENST00000372688 801 ntTSL 2 BASIC2.2□□□□□ -2.06
HLA-DOBP13765 RNU1-109P-201ENST00000383960 147 ntBASIC2.2□□□□□ -2.06
HLA-DOBP13765 MIR518C-201ENST00000384822 101 ntBASIC2.2□□□□□ -2.06
HLA-DOBP13765 MIR627-201ENST00000384979 97 ntBASIC2.2□□□□□ -2.06
HLA-DOBP13765 FO393413.1-201ENST00000402892 195 ntBASIC2.2□□□□□ -2.06
HLA-DOBP13765 RNA5SP492-201ENST00000411330 114 ntBASIC2.2□□□□□ -2.06
HLA-DOBP13765 SDAD1P3-201ENST00000427380 333 ntBASIC2.2□□□□□ -2.06
HLA-DOBP13765 CBX3P6-201ENST00000430257 527 ntBASIC2.2□□□□□ -2.06
HLA-DOBP13765 EEF1B2P7-201ENST00000451177 676 ntBASIC2.2□□□□□ -2.06
HLA-DOBP13765 CYP2C59P-201ENST00000457790 269 ntBASIC2.2□□□□□ -2.06
HLA-DOBP13765 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.2□□□□□ -2.06
HLA-DOBP13765 SNORA25.14-201ENST00000516481 132 ntBASIC2.2□□□□□ -2.06
HLA-DOBP13765 RNA5SP148-201ENST00000516527 94 ntBASIC2.2□□□□□ -2.06
HLA-DOBP13765 RN7SKP49-201ENST00000516675 260 ntBASIC2.2□□□□□ -2.06
HLA-DOBP13765 AC034114.1-201ENST00000520293 285 ntBASIC2.2□□□□□ -2.06
HLA-DOBP13765 AC018630.3-201ENST00000542637 96 ntBASIC2.2□□□□□ -2.06
HLA-DOBP13765 AC090517.1-201ENST00000569307 266 ntBASIC2.2□□□□□ -2.06
HLA-DOBP13765 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
HLA-DOBP13765 AC125232.2-201ENST00000592457 143 ntBASIC2.2□□□□□ -2.06
HLA-DOBP13765 AC005562.2-201ENST00000618264 111 ntBASIC2.2□□□□□ -2.06
HLA-DOBP13765 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HLA-DOBP13765 VTRNA1-1-201ENST00000363120 99 ntBASIC2.19□□□□□ -2.06
HLA-DOBP13765 SNORA25.6-201ENST00000364121 118 ntBASIC2.19□□□□□ -2.06
HLA-DOBP13765 RNA5SP240-201ENST00000365355 128 ntBASIC2.19□□□□□ -2.06
HLA-DOBP13765 RNU6-1274P-201ENST00000384557 107 ntBASIC2.19□□□□□ -2.06
HLA-DOBP13765 MIR95-201ENST00000385072 81 ntBASIC2.19□□□□□ -2.06
HLA-DOBP13765 RNU6-220P-201ENST00000390919 107 ntBASIC2.19□□□□□ -2.06
HLA-DOBP13765 SNORD78.2-201ENST00000391076 69 ntBASIC2.19□□□□□ -2.06
HLA-DOBP13765 Y_RNA.597-201ENST00000410463 100 ntBASIC2.19□□□□□ -2.06
HLA-DOBP13765 Z82209.1-201ENST00000422141 2135 ntBASIC2.19□□□□□ -2.06
HLA-DOBP13765 AL161788.1-201ENST00000441805 169 ntBASIC2.19□□□□□ -2.06
HLA-DOBP13765 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.19□□□□□ -2.06
HLA-DOBP13765 HSPE1P18-201ENST00000517602 280 ntBASIC2.19□□□□□ -2.06
HLA-DOBP13765 MIR3117-201ENST00000584034 78 ntBASIC2.19□□□□□ -2.06
HLA-DOBP13765 AL121655.1-201ENST00000605811 308 ntBASIC2.19□□□□□ -2.06
HLA-DOBP13765 AL021879.1-201ENST00000611756 288 ntBASIC2.19□□□□□ -2.06
HLA-DOBP13765 AC010999.1-201ENST00000611856 324 ntBASIC2.19□□□□□ -2.06
HLA-DOBP13765 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.19□□□□□ -2.06
HLA-DOBP13765 TCL6_2.1-201ENST00000615162 119 ntBASIC2.19□□□□□ -2.06
HLA-DOBP13765 AL449363.1-201ENST00000617815 186 ntBASIC2.19□□□□□ -2.06
HLA-DOBP13765 AL078596.1-201ENST00000624856 447 ntBASIC2.19□□□□□ -2.06
HLA-DOBP13765 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
HLA-DOBP13765 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HLA-DOBP13765 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.18□□□□□ -2.06
HLA-DOBP13765 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.18□□□□□ -2.06
HLA-DOBP13765 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.18□□□□□ -2.06
HLA-DOBP13765 RNU1-62P-201ENST00000362599 164 ntBASIC2.18□□□□□ -2.06
HLA-DOBP13765 Y_RNA.153-201ENST00000363615 91 ntBASIC2.18□□□□□ -2.06
HLA-DOBP13765 RNU6-525P-201ENST00000363685 104 ntBASIC2.18□□□□□ -2.06
HLA-DOBP13765 RNU6-708P-201ENST00000384217 107 ntBASIC2.18□□□□□ -2.06
HLA-DOBP13765 RNU6-318P-201ENST00000384283 103 ntBASIC2.18□□□□□ -2.06
HLA-DOBP13765 SNORA12-201ENST00000391162 147 ntBASIC2.18□□□□□ -2.06
HLA-DOBP13765 RNU2-63P-201ENST00000410792 194 ntBASIC2.18□□□□□ -2.06
HLA-DOBP13765 RNU6-1001P-201ENST00000411265 100 ntBASIC2.18□□□□□ -2.06
HLA-DOBP13765 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.18□□□□□ -2.06
HLA-DOBP13765 AL445305.1-201ENST00000432577 575 ntBASIC2.18□□□□□ -2.06
HLA-DOBP13765 RPS12P2-201ENST00000439728 269 ntBASIC2.18□□□□□ -2.06
HLA-DOBP13765 AC007395.1-201ENST00000451333 677 ntBASIC2.18□□□□□ -2.06
HLA-DOBP13765 U8.20-201ENST00000459445 131 ntBASIC2.18□□□□□ -2.06
HLA-DOBP13765 AC090515.1-201ENST00000465295 476 ntBASIC2.18□□□□□ -2.06
HLA-DOBP13765 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.18□□□□□ -2.06
HLA-DOBP13765 CKS1BP2-201ENST00000497342 240 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms