Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.86□□□□□ -2.11
KRT3P12035 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.86□□□□□ -2.11
KRT3P12035 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.86□□□□□ -2.11
KRT3P12035 AC016256.1-201ENST00000547971 354 ntBASIC1.86□□□□□ -2.11
KRT3P12035 AC009994.1-201ENST00000606889 253 ntBASIC1.86□□□□□ -2.11
KRT3P12035 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.86□□□□□ -2.11
KRT3P12035 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.86□□□□□ -2.11
KRT3P12035 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.86□□□□□ -2.11
KRT3P12035 AL590240.4-201ENST00000616908 390 ntBASIC1.86□□□□□ -2.11
KRT3P12035 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
KRT3P12035 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRT3P12035 ZNF204P-201ENST00000416749 2397 ntBASIC1.85□□□□□ -2.11
KRT3P12035 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRT3P12035 Y_RNA.99-201ENST00000363138 105 ntBASIC1.85□□□□□ -2.11
KRT3P12035 RNU6-1164P-201ENST00000364428 107 ntBASIC1.85□□□□□ -2.11
KRT3P12035 RNU6-541P-201ENST00000384709 110 ntBASIC1.85□□□□□ -2.11
KRT3P12035 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRT3P12035 MTND3P8-201ENST00000412909 339 ntBASIC1.85□□□□□ -2.11
KRT3P12035 USP9YP30-201ENST00000430729 455 ntBASIC1.85□□□□□ -2.11
KRT3P12035 Z82188.1-201ENST00000436709 154 ntBASIC1.85□□□□□ -2.11
KRT3P12035 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.85□□□□□ -2.11
KRT3P12035 AL035666.1-201ENST00000446195 348 ntBASIC1.85□□□□□ -2.11
KRT3P12035 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.85□□□□□ -2.11
KRT3P12035 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.85□□□□□ -2.11
KRT3P12035 AP003033.1-201ENST00000527244 415 ntBASIC1.85□□□□□ -2.11
KRT3P12035 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.85□□□□□ -2.11
KRT3P12035 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.85□□□□□ -2.11
KRT3P12035 MIR3618-201ENST00000580330 88 ntBASIC1.85□□□□□ -2.11
KRT3P12035 CYP2C61P-201ENST00000604072 290 ntBASIC1.85□□□□□ -2.11
KRT3P12035 AC005520.5-201ENST00000613926 164 ntBASIC1.85□□□□□ -2.11
KRT3P12035 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.85□□□□□ -2.11
KRT3P12035 AL359314.1-201ENST00000616913 261 ntBASIC1.85□□□□□ -2.11
KRT3P12035 AC005562.2-201ENST00000618264 111 ntBASIC1.85□□□□□ -2.11
KRT3P12035 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.85□□□□□ -2.11
KRT3P12035 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.85□□□□□ -2.11
KRT3P12035 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRT3P12035 Y_RNA.2-201ENST00000362330 96 ntBASIC1.84□□□□□ -2.11
KRT3P12035 RNU1-58P-201ENST00000362413 163 ntBASIC1.84□□□□□ -2.11
KRT3P12035 SNORD114-6-201ENST00000364393 72 ntBASIC1.84□□□□□ -2.11
KRT3P12035 Y_RNA.533-201ENST00000384596 114 ntBASIC1.84□□□□□ -2.11
KRT3P12035 U8.13-201ENST00000390842 128 ntBASIC1.84□□□□□ -2.11
KRT3P12035 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
KRT3P12035 RN7SKP284-201ENST00000411002 343 ntBASIC1.84□□□□□ -2.11
KRT3P12035 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.84□□□□□ -2.11
KRT3P12035 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.84□□□□□ -2.11
KRT3P12035 MTND1P2-201ENST00000430604 821 ntBASIC1.84□□□□□ -2.11
KRT3P12035 OR2AQ1P-201ENST00000451972 200 ntBASIC1.84□□□□□ -2.11
KRT3P12035 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.84□□□□□ -2.11
KRT3P12035 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.84□□□□□ -2.11
KRT3P12035 AC024614.2-201ENST00000577584 372 ntBASIC1.84□□□□□ -2.11
KRT3P12035 AC137590.2-201ENST00000619709 240 ntBASIC1.84□□□□□ -2.11
KRT3P12035 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
KRT3P12035 RNA5SP493-201ENST00000364115 91 ntBASIC1.83□□□□□ -2.12
KRT3P12035 RNU4-9P-201ENST00000364951 139 ntBASIC1.83□□□□□ -2.12
KRT3P12035 RNU6-767P-201ENST00000384132 107 ntBASIC1.83□□□□□ -2.12
KRT3P12035 SNORA8-201ENST00000384574 139 ntBASIC1.83□□□□□ -2.12
KRT3P12035 SNORA12.2-201ENST00000391040 156 ntBASIC1.83□□□□□ -2.12
KRT3P12035 MIR320B2-201ENST00000408479 138 ntBASIC1.83□□□□□ -2.12
KRT3P12035 AC074085.1-201ENST00000413598 418 ntBASIC1.83□□□□□ -2.12
KRT3P12035 AC123900.1-201ENST00000420390 96 ntBASIC1.83□□□□□ -2.12
KRT3P12035 OOSP1P1-201ENST00000423265 274 ntBASIC1.83□□□□□ -2.12
KRT3P12035 RPS3AP52-201ENST00000435639 297 ntBASIC1.83□□□□□ -2.12
KRT3P12035 AC107399.1-201ENST00000451226 265 ntBASIC1.83□□□□□ -2.12
KRT3P12035 MTCO3P8-201ENST00000453691 755 ntBASIC1.83□□□□□ -2.12
KRT3P12035 RN7SL429P-201ENST00000479090 223 ntBASIC1.83□□□□□ -2.12
KRT3P12035 RN7SL489P-201ENST00000486185 223 ntBASIC1.83□□□□□ -2.12
KRT3P12035 RN7SL327P-201ENST00000488659 223 ntBASIC1.83□□□□□ -2.12
KRT3P12035 RNU7-30P-201ENST00000516835 62 ntBASIC1.83□□□□□ -2.12
KRT3P12035 RNU1-117P-201ENST00000517041 158 ntBASIC1.83□□□□□ -2.12
KRT3P12035 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.83□□□□□ -2.12
KRT3P12035 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.83□□□□□ -2.12
KRT3P12035 SNRPGP20-201ENST00000604477 205 ntBASIC1.83□□□□□ -2.12
KRT3P12035 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.83□□□□□ -2.12
KRT3P12035 RN7SL853P-201ENST00000617250 223 ntBASIC1.83□□□□□ -2.12
KRT3P12035 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
KRT3P12035 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.83□□□□□ -2.12
KRT3P12035 LINC02555-201ENST00000563933 1951 ntBASIC1.82□□□□□ -2.12
KRT3P12035 Y_RNA.72-201ENST00000362894 103 ntBASIC1.82□□□□□ -2.12
KRT3P12035 SNORD48-201ENST00000364953 64 ntBASIC1.82□□□□□ -2.12
KRT3P12035 SNORD31B-201ENST00000364977 69 ntBASIC1.82□□□□□ -2.12
KRT3P12035 RNU6-418P-201ENST00000384035 107 ntBASIC1.82□□□□□ -2.12
KRT3P12035 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
KRT3P12035 AL358453.1-201ENST00000422522 250 ntBASIC1.82□□□□□ -2.12
KRT3P12035 RPL23AP50-201ENST00000434149 455 ntBASIC1.82□□□□□ -2.12
KRT3P12035 HSPE1P21-201ENST00000438283 308 ntBASIC1.82□□□□□ -2.12
KRT3P12035 MTND1P17-201ENST00000448961 204 ntBASIC1.82□□□□□ -2.12
KRT3P12035 AC079354.2-201ENST00000453523 154 ntBASIC1.82□□□□□ -2.12
KRT3P12035 RPL23AP63-201ENST00000498752 471 ntBASIC1.82□□□□□ -2.12
KRT3P12035 MTND5P5-201ENST00000503764 376 ntBASIC1.82□□□□□ -2.12
KRT3P12035 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.82□□□□□ -2.12
KRT3P12035 DEFB131C-201ENST00000528817 165 ntBASIC1.82□□□□□ -2.12
KRT3P12035 MIR4753-201ENST00000585119 83 ntBASIC1.82□□□□□ -2.12
KRT3P12035 TCL6_2.1-201ENST00000615162 119 ntBASIC1.82□□□□□ -2.12
KRT3P12035 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.82□□□□□ -2.12
KRT3P12035 AC084768.2-201ENST00000622736 221 ntBASIC1.82□□□□□ -2.12
KRT3P12035 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.82□□□□□ -2.12
KRT3P12035 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.81□□□□□ -2.12
KRT3P12035 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
KRT3P12035 AL356292.1-201ENST00000283110 373 ntBASIC1.81□□□□□ -2.12
KRT3P12035 RNU6-1305P-201ENST00000364353 104 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms