Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AC130454.1-201ENST00000622948 401 ntBASIC2□□□□□ -2.09
RAB40ALP0C0E4 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2□□□□□ -2.09
RAB40ALP0C0E4 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.99□□□□□ -2.09
RAB40ALP0C0E4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
RAB40ALP0C0E4 ZNF204P-201ENST00000416749 2397 ntBASIC1.99□□□□□ -2.09
RAB40ALP0C0E4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.99□□□□□ -2.09
RAB40ALP0C0E4 SNORA16B-201ENST00000364674 135 ntBASIC1.99□□□□□ -2.09
RAB40ALP0C0E4 SNORD31B-201ENST00000364977 69 ntBASIC1.99□□□□□ -2.09
RAB40ALP0C0E4 RNU11-3P-201ENST00000391111 133 ntBASIC1.99□□□□□ -2.09
RAB40ALP0C0E4 AL023284.1-201ENST00000403956 276 ntBASIC1.99□□□□□ -2.09
RAB40ALP0C0E4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.99□□□□□ -2.09
RAB40ALP0C0E4 AC123900.1-201ENST00000420390 96 ntBASIC1.99□□□□□ -2.09
RAB40ALP0C0E4 NCOR1P3-201ENST00000420479 303 ntBASIC1.99□□□□□ -2.09
RAB40ALP0C0E4 AL591806.2-201ENST00000433122 173 ntBASIC1.99□□□□□ -2.09
RAB40ALP0C0E4 MTND4P17-201ENST00000470444 350 ntBASIC1.99□□□□□ -2.09
RAB40ALP0C0E4 RPL23AP42-201ENST00000471152 471 ntBASIC1.99□□□□□ -2.09
RAB40ALP0C0E4 RPL30P10-201ENST00000488148 337 ntBASIC1.99□□□□□ -2.09
RAB40ALP0C0E4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.99□□□□□ -2.09
RAB40ALP0C0E4 Y_RNA.670-201ENST00000516255 105 ntBASIC1.99□□□□□ -2.09
RAB40ALP0C0E4 Y_RNA.691-201ENST00000516611 103 ntBASIC1.99□□□□□ -2.09
RAB40ALP0C0E4 Y_RNA.708-201ENST00000516950 96 ntBASIC1.99□□□□□ -2.09
RAB40ALP0C0E4 AP005660.1-201ENST00000522972 293 ntBASIC1.99□□□□□ -2.09
RAB40ALP0C0E4 AL590705.4-201ENST00000532209 134 ntBASIC1.99□□□□□ -2.09
RAB40ALP0C0E4 AC015712.3-201ENST00000559380 164 ntBASIC1.99□□□□□ -2.09
RAB40ALP0C0E4 MIR5694-201ENST00000581190 76 ntBASIC1.99□□□□□ -2.09
RAB40ALP0C0E4 AC005730.3-201ENST00000583067 366 ntBASIC1.99□□□□□ -2.09
RAB40ALP0C0E4 MIR4769-201ENST00000584126 77 ntBASIC1.99□□□□□ -2.09
RAB40ALP0C0E4 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.99□□□□□ -2.09
RAB40ALP0C0E4 PISRT1.1-201ENST00000616930 107 ntBASIC1.99□□□□□ -2.09
RAB40ALP0C0E4 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.99□□□□□ -2.09
RAB40ALP0C0E4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
RAB40ALP0C0E4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
RAB40ALP0C0E4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
RAB40ALP0C0E4 AL596028.1-201ENST00000326971 197 ntBASIC1.98□□□□□ -2.09
RAB40ALP0C0E4 RNU1-58P-201ENST00000362413 163 ntBASIC1.98□□□□□ -2.09
RAB40ALP0C0E4 Y_RNA.48-201ENST00000362710 103 ntBASIC1.98□□□□□ -2.09
RAB40ALP0C0E4 Y_RNA.319-201ENST00000365138 92 ntBASIC1.98□□□□□ -2.09
RAB40ALP0C0E4 RNU6-541P-201ENST00000384709 110 ntBASIC1.98□□□□□ -2.09
RAB40ALP0C0E4 RNA5SP465-201ENST00000391195 109 ntBASIC1.98□□□□□ -2.09
RAB40ALP0C0E4 RNA5SP450-201ENST00000411206 102 ntBASIC1.98□□□□□ -2.09
RAB40ALP0C0E4 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.98□□□□□ -2.09
RAB40ALP0C0E4 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.98□□□□□ -2.09
RAB40ALP0C0E4 MTCO3P8-201ENST00000453691 755 ntBASIC1.98□□□□□ -2.09
RAB40ALP0C0E4 Y_RNA.635-201ENST00000459041 101 ntBASIC1.98□□□□□ -2.09
RAB40ALP0C0E4 RN7SKP210-201ENST00000459176 261 ntBASIC1.98□□□□□ -2.09
RAB40ALP0C0E4 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.98□□□□□ -2.09
RAB40ALP0C0E4 AC108210.2-201ENST00000503681 201 ntBASIC1.98□□□□□ -2.09
RAB40ALP0C0E4 RNU7-175P-201ENST00000515915 61 ntBASIC1.98□□□□□ -2.09
RAB40ALP0C0E4 RNA5SP54-201ENST00000516951 92 ntBASIC1.98□□□□□ -2.09
RAB40ALP0C0E4 CBX3P8-201ENST00000532412 525 ntBASIC1.98□□□□□ -2.09
RAB40ALP0C0E4 AC009229.3-201ENST00000608056 282 ntBASIC1.98□□□□□ -2.09
RAB40ALP0C0E4 MTND4P1-201ENST00000457501 1466 ntBASIC1.98□□□□□ -2.09
RAB40ALP0C0E4 BX322639.1-202ENST00000423987 2213 ntBASIC1.98□□□□□ -2.09
RAB40ALP0C0E4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.98□□□□□ -2.09
RAB40ALP0C0E4 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
RAB40ALP0C0E4 Y_RNA.132-201ENST00000363421 102 ntBASIC1.97□□□□□ -2.09
RAB40ALP0C0E4 RNU6-595P-201ENST00000363944 107 ntBASIC1.97□□□□□ -2.09
RAB40ALP0C0E4 Y_RNA.490-201ENST00000384413 102 ntBASIC1.97□□□□□ -2.09
RAB40ALP0C0E4 SNORA12.2-201ENST00000391040 156 ntBASIC1.97□□□□□ -2.09
RAB40ALP0C0E4 AL356432.1-201ENST00000405809 419 ntBASIC1.97□□□□□ -2.09
RAB40ALP0C0E4 MIR1283-2-201ENST00000408621 87 ntBASIC1.97□□□□□ -2.09
RAB40ALP0C0E4 AC009237.7-201ENST00000447357 229 ntBASIC1.97□□□□□ -2.09
RAB40ALP0C0E4 AC016925.1-201ENST00000458303 298 ntBASIC1.97□□□□□ -2.09
RAB40ALP0C0E4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.97□□□□□ -2.09
RAB40ALP0C0E4 RPL7P42-201ENST00000481005 679 ntBASIC1.97□□□□□ -2.09
RAB40ALP0C0E4 RNU6-1198P-201ENST00000516904 67 ntBASIC1.97□□□□□ -2.09
RAB40ALP0C0E4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.97□□□□□ -2.09
RAB40ALP0C0E4 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.97□□□□□ -2.09
RAB40ALP0C0E4 AL355073.2-201ENST00000612106 557 ntBASIC1.97□□□□□ -2.09
RAB40ALP0C0E4 AL359697.1-201ENST00000624879 587 ntBASIC1.97□□□□□ -2.09
RAB40ALP0C0E4 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.97□□□□□ -2.09
RAB40ALP0C0E4 LINC02555-201ENST00000563933 1951 ntBASIC1.97□□□□□ -2.09
RAB40ALP0C0E4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.97□□□□□ -2.09
RAB40ALP0C0E4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.96□□□□□ -2.1
RAB40ALP0C0E4 RNU6-545P-201ENST00000362681 104 ntBASIC1.96□□□□□ -2.1
RAB40ALP0C0E4 RNU6-23P-201ENST00000363283 107 ntBASIC1.96□□□□□ -2.1
RAB40ALP0C0E4 SNORA72.1-201ENST00000363485 129 ntBASIC1.96□□□□□ -2.1
RAB40ALP0C0E4 MIR597-201ENST00000384968 97 ntBASIC1.96□□□□□ -2.1
RAB40ALP0C0E4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.96□□□□□ -2.1
RAB40ALP0C0E4 AC139712.2-201ENST00000424302 339 ntBASIC1.96□□□□□ -2.1
RAB40ALP0C0E4 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.96□□□□□ -2.1
RAB40ALP0C0E4 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.96□□□□□ -2.1
RAB40ALP0C0E4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.96□□□□□ -2.1
RAB40ALP0C0E4 AL590240.4-201ENST00000616908 390 ntBASIC1.96□□□□□ -2.1
RAB40ALP0C0E4 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.96□□□□□ -2.1
RAB40ALP0C0E4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.96□□□□□ -2.1
RAB40ALP0C0E4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
RAB40ALP0C0E4 KPNA2P1-201ENST00000458289 1591 ntBASIC1.96□□□□□ -2.1
RAB40ALP0C0E4 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.96□□□□□ -2.1
RAB40ALP0C0E4 MTND4P12-201ENST00000498999 1377 ntBASIC1.96□□□□□ -2.1
RAB40ALP0C0E4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.95□□□□□ -2.1
RAB40ALP0C0E4 SNORD115-8-201ENST00000363856 82 ntBASIC1.95□□□□□ -2.1
RAB40ALP0C0E4 SNORD115-38-201ENST00000365037 82 ntBASIC1.95□□□□□ -2.1
RAB40ALP0C0E4 Y_RNA.405-201ENST00000383979 100 ntBASIC1.95□□□□□ -2.1
RAB40ALP0C0E4 Y_RNA.451-201ENST00000384200 100 ntBASIC1.95□□□□□ -2.1
RAB40ALP0C0E4 RNU6-17P-201ENST00000384245 107 ntBASIC1.95□□□□□ -2.1
RAB40ALP0C0E4 RNU6-18P-201ENST00000384527 107 ntBASIC1.95□□□□□ -2.1
RAB40ALP0C0E4 Y_RNA.524-201ENST00000384564 100 ntBASIC1.95□□□□□ -2.1
RAB40ALP0C0E4 Y_RNA.561-201ENST00000384694 100 ntBASIC1.95□□□□□ -2.1
RAB40ALP0C0E4 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms