Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.86□□□□□ -1.95
RHOP08100 UBL5P4-201ENST00000562584 236 ntBASIC2.86□□□□□ -1.95
RHOP08100 MIR5695-201ENST00000579717 85 ntBASIC2.86□□□□□ -1.95
RHOP08100 ZNF861P-201ENST00000588126 639 ntBASIC2.86□□□□□ -1.95
RHOP08100 AL034555.1-201ENST00000604816 211 ntBASIC2.86□□□□□ -1.95
RHOP08100 uc_338.14-201ENST00000613162 166 ntBASIC2.86□□□□□ -1.95
RHOP08100 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.86□□□□□ -1.95
RHOP08100 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
RHOP08100 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.85□□□□□ -1.95
RHOP08100 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
RHOP08100 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RHOP08100 SNORD114-19-201ENST00000363072 75 ntBASIC2.85□□□□□ -1.95
RHOP08100 RNA5SP68-201ENST00000363885 119 ntBASIC2.85□□□□□ -1.95
RHOP08100 RNU6-280P-201ENST00000364145 104 ntBASIC2.85□□□□□ -1.95
RHOP08100 RNU4-56P-201ENST00000364700 142 ntBASIC2.85□□□□□ -1.95
RHOP08100 SNORD21-201ENST00000383953 95 ntBASIC2.85□□□□□ -1.95
RHOP08100 RNU6-1145P-201ENST00000384246 107 ntBASIC2.85□□□□□ -1.95
RHOP08100 Y_RNA.462-201ENST00000384268 102 ntBASIC2.85□□□□□ -1.95
RHOP08100 RNU6-1026P-201ENST00000384465 108 ntBASIC2.85□□□□□ -1.95
RHOP08100 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RHOP08100 AIMP1P2-201ENST00000425294 312 ntBASIC2.85□□□□□ -1.95
RHOP08100 WARS2P1-201ENST00000429678 537 ntBASIC2.85□□□□□ -1.95
RHOP08100 AC112220.1-201ENST00000434628 355 ntBASIC2.85□□□□□ -1.95
RHOP08100 AL513328.1-201ENST00000446460 224 ntBASIC2.85□□□□□ -1.95
RHOP08100 RPS3P1-201ENST00000456781 192 ntBASIC2.85□□□□□ -1.95
RHOP08100 GZMAP1-201ENST00000503054 631 ntBASIC2.85□□□□□ -1.95
RHOP08100 AC096725.1-201ENST00000514266 313 ntBASIC2.85□□□□□ -1.95
RHOP08100 AC023824.2-201ENST00000566185 400 ntBASIC2.85□□□□□ -1.95
RHOP08100 MIR4423-201ENST00000580922 80 ntBASIC2.85□□□□□ -1.95
RHOP08100 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.85□□□□□ -1.95
RHOP08100 MIR6817-201ENST00000615588 66 ntBASIC2.85□□□□□ -1.95
RHOP08100 AC011476.5-201ENST00000615594 130 ntBASIC2.85□□□□□ -1.95
RHOP08100 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RHOP08100 BX322639.1-202ENST00000423987 2213 ntBASIC2.85□□□□□ -1.95
RHOP08100 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.85□□□□□ -1.95
RHOP08100 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.85□□□□□ -1.95
RHOP08100 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RHOP08100 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.85□□□□□ -1.95
RHOP08100 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.84□□□□□ -1.95
RHOP08100 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.84□□□□□ -1.95
RHOP08100 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
RHOP08100 Y_RNA.552-201ENST00000384665 112 ntBASIC2.84□□□□□ -1.95
RHOP08100 MIR215-201ENST00000384858 110 ntBASIC2.84□□□□□ -1.95
RHOP08100 AL133475.1-201ENST00000404414 305 ntBASIC2.84□□□□□ -1.95
RHOP08100 MIR548H3-201ENST00000408771 118 ntBASIC2.84□□□□□ -1.95
RHOP08100 AC138623.1-201ENST00000418060 216 ntBASIC2.84□□□□□ -1.95
RHOP08100 AC005002.2-201ENST00000438228 269 ntBASIC2.84□□□□□ -1.95
RHOP08100 AC007395.1-201ENST00000451333 677 ntBASIC2.84□□□□□ -1.95
RHOP08100 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.84□□□□□ -1.95
RHOP08100 AC079598.5-201ENST00000547460 117 ntBASIC2.84□□□□□ -1.95
RHOP08100 AC091544.4-201ENST00000555268 342 ntBASIC2.84□□□□□ -1.95
RHOP08100 MIR3128-201ENST00000581957 66 ntBASIC2.84□□□□□ -1.95
RHOP08100 AC012433.1-201ENST00000588916 398 ntBASIC2.84□□□□□ -1.95
RHOP08100 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.84□□□□□ -1.95
RHOP08100 UCA1.1-201ENST00000620952 75 ntBASIC2.84□□□□□ -1.95
RHOP08100 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
RHOP08100 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
RHOP08100 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
RHOP08100 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.83□□□□□ -1.96
RHOP08100 Y_RNA.60-201ENST00000362831 98 ntBASIC2.83□□□□□ -1.96
RHOP08100 RNU6-529P-201ENST00000363383 104 ntBASIC2.83□□□□□ -1.96
RHOP08100 RNU6-873P-201ENST00000363833 107 ntBASIC2.83□□□□□ -1.96
RHOP08100 RNU6-245P-201ENST00000384020 107 ntBASIC2.83□□□□□ -1.96
RHOP08100 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.83□□□□□ -1.96
RHOP08100 RNA5SP201-201ENST00000410316 124 ntBASIC2.83□□□□□ -1.96
RHOP08100 AC244505.4-201ENST00000434905 287 ntBASIC2.83□□□□□ -1.96
RHOP08100 SSXP5-201ENST00000443473 287 ntBASIC2.83□□□□□ -1.96
RHOP08100 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.83□□□□□ -1.96
RHOP08100 AP001324.2-201ENST00000461163 319 ntBASIC2.83□□□□□ -1.96
RHOP08100 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.83□□□□□ -1.96
RHOP08100 RNU6-496P-201ENST00000516145 99 ntBASIC2.83□□□□□ -1.96
RHOP08100 RNA5SP148-201ENST00000516527 94 ntBASIC2.83□□□□□ -1.96
RHOP08100 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.83□□□□□ -1.96
RHOP08100 AC073410.2-201ENST00000603240 332 ntBASIC2.83□□□□□ -1.96
RHOP08100 AC090115.4-201ENST00000609970 188 ntBASIC2.83□□□□□ -1.96
RHOP08100 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.83□□□□□ -1.96
RHOP08100 AC002064.3-201ENST00000623448 346 ntBASIC2.83□□□□□ -1.96
RHOP08100 AC127459.3-201ENST00000624328 466 ntBASIC2.83□□□□□ -1.96
RHOP08100 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.83□□□□□ -1.96
RHOP08100 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
RHOP08100 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RHOP08100 AC138915.1-201ENST00000565427 1685 ntBASIC2.82□□□□□ -1.96
RHOP08100 MTND5P6-201ENST00000422338 1798 ntBASIC2.82□□□□□ -1.96
RHOP08100 RNU6-937P-201ENST00000384325 106 ntBASIC2.82□□□□□ -1.96
RHOP08100 MIR186-201ENST00000384988 86 ntBASIC2.82□□□□□ -1.96
RHOP08100 RPL21P3-201ENST00000395517 478 ntBASIC2.82□□□□□ -1.96
RHOP08100 AC009414.1-201ENST00000427200 443 ntBASIC2.82□□□□□ -1.96
RHOP08100 AC146507.2-201ENST00000460608 476 ntBASIC2.82□□□□□ -1.96
RHOP08100 AC003982.1-202ENST00000469928 248 ntBASIC2.82□□□□□ -1.96
RHOP08100 CYCSP23-201ENST00000519781 313 ntBASIC2.82□□□□□ -1.96
RHOP08100 AK6P2-201ENST00000549020 471 ntBASIC2.82□□□□□ -1.96
RHOP08100 MIR3923-201ENST00000579521 83 ntBASIC2.82□□□□□ -1.96
RHOP08100 AC010620.2-201ENST00000600135 313 ntBASIC2.82□□□□□ -1.96
RHOP08100 AC141273.2-201ENST00000618989 130 ntBASIC2.82□□□□□ -1.96
RHOP08100 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.82□□□□□ -1.96
RHOP08100 AL109809.4-201ENST00000603520 2185 ntBASIC2.82□□□□□ -1.96
RHOP08100 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
RHOP08100 AL355596.1-201ENST00000565399 3996 ntBASIC2.82□□□□□ -1.96
RHOP08100 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.81□□□□□ -1.96
RHOP08100 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms