Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 Y_RNA.352-201ENST00000365439 102 ntBASIC3.04□□□□□ -1.92
HLA-DOAP06340 RNU6-142P-201ENST00000384019 107 ntBASIC3.04□□□□□ -1.92
HLA-DOAP06340 MIR329-1-201ENST00000385028 80 ntBASIC3.04□□□□□ -1.92
HLA-DOAP06340 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DOAP06340 PTGES3P4-201ENST00000426243 356 ntBASIC3.04□□□□□ -1.92
HLA-DOAP06340 AC244670.1-201ENST00000436879 112 ntBASIC3.04□□□□□ -1.92
HLA-DOAP06340 RPL23AP3-201ENST00000453844 468 ntBASIC3.04□□□□□ -1.92
HLA-DOAP06340 AP002884.2-201ENST00000471647 395 ntBASIC3.04□□□□□ -1.92
HLA-DOAP06340 AC016632.1-201ENST00000503994 196 ntBASIC3.04□□□□□ -1.92
HLA-DOAP06340 RNA5SP320-201ENST00000516263 124 ntBASIC3.04□□□□□ -1.92
HLA-DOAP06340 AC055872.1-201ENST00000570978 278 ntBASIC3.04□□□□□ -1.92
HLA-DOAP06340 CTSLP2-204ENST00000629029 392 ntBASIC3.04□□□□□ -1.92
HLA-DOAP06340 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.04□□□□□ -1.92
HLA-DOAP06340 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
HLA-DOAP06340 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.04□□□□□ -1.92
HLA-DOAP06340 Y_RNA.76-201ENST00000362931 109 ntBASIC3.03□□□□□ -1.92
HLA-DOAP06340 SNORD81.1-201ENST00000363064 77 ntBASIC3.03□□□□□ -1.92
HLA-DOAP06340 RNU6-1285P-201ENST00000363480 105 ntBASIC3.03□□□□□ -1.92
HLA-DOAP06340 SNORA51.4-201ENST00000364993 124 ntBASIC3.03□□□□□ -1.92
HLA-DOAP06340 RN7SKP61-201ENST00000410642 295 ntBASIC3.03□□□□□ -1.92
HLA-DOAP06340 RNU6-651P-201ENST00000411040 105 ntBASIC3.03□□□□□ -1.92
HLA-DOAP06340 AC010095.1-201ENST00000443543 144 ntBASIC3.03□□□□□ -1.92
HLA-DOAP06340 RNU6-966P-201ENST00000516479 104 ntBASIC3.03□□□□□ -1.92
HLA-DOAP06340 AC027176.1-201ENST00000560204 514 ntBASIC3.03□□□□□ -1.92
HLA-DOAP06340 AC012531.5-201ENST00000611375 151 ntBASIC3.03□□□□□ -1.92
HLA-DOAP06340 AL161431.1-201ENST00000618966 4205 ntBASIC3.03□□□□□ -1.92
HLA-DOAP06340 AC010680.1-201ENST00000590024 3590 ntBASIC3.03□□□□□ -1.92
HLA-DOAP06340 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.03□□□□□ -1.92
HLA-DOAP06340 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HLA-DOAP06340 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.93
HLA-DOAP06340 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DOAP06340 AL355596.1-201ENST00000565399 3996 ntBASIC3.02□□□□□ -1.93
HLA-DOAP06340 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DOAP06340 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.02□□□□□ -1.93
HLA-DOAP06340 Y_RNA.40-201ENST00000362645 93 ntBASIC3.02□□□□□ -1.93
HLA-DOAP06340 RNU6-626P-201ENST00000363354 107 ntBASIC3.02□□□□□ -1.93
HLA-DOAP06340 SNORA67.4-201ENST00000384688 142 ntBASIC3.02□□□□□ -1.93
HLA-DOAP06340 RNU6-750P-201ENST00000390946 107 ntBASIC3.02□□□□□ -1.93
HLA-DOAP06340 AC019205.3-201ENST00000424573 156 ntBASIC3.02□□□□□ -1.93
HLA-DOAP06340 PIGPP3-201ENST00000425307 415 ntBASIC3.02□□□□□ -1.93
HLA-DOAP06340 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DOAP06340 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DOAP06340 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DOAP06340 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DOAP06340 AC107626.1-201ENST00000471084 183 ntBASIC3.02□□□□□ -1.93
HLA-DOAP06340 RNU5B-3P-201ENST00000516601 115 ntBASIC3.02□□□□□ -1.93
HLA-DOAP06340 RNU6-567P-201ENST00000516746 107 ntBASIC3.02□□□□□ -1.93
HLA-DOAP06340 RNU6-711P-201ENST00000517255 106 ntBASIC3.02□□□□□ -1.93
HLA-DOAP06340 CKS1BP7-201ENST00000522230 235 ntBASIC3.02□□□□□ -1.93
HLA-DOAP06340 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DOAP06340 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DOAP06340 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-DOAP06340 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-DOAP06340 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
HLA-DOAP06340 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DOAP06340 RNU6-529P-201ENST00000363383 104 ntBASIC3.01□□□□□ -1.93
HLA-DOAP06340 Y_RNA.150-201ENST00000363562 102 ntBASIC3.01□□□□□ -1.93
HLA-DOAP06340 RNU6-873P-201ENST00000363833 107 ntBASIC3.01□□□□□ -1.93
HLA-DOAP06340 RNU6-280P-201ENST00000364145 104 ntBASIC3.01□□□□□ -1.93
HLA-DOAP06340 Y_RNA.297-201ENST00000364950 91 ntBASIC3.01□□□□□ -1.93
HLA-DOAP06340 RNU6-290P-201ENST00000365212 101 ntBASIC3.01□□□□□ -1.93
HLA-DOAP06340 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DOAP06340 RNU6-20P-201ENST00000384106 107 ntBASIC3.01□□□□□ -1.93
HLA-DOAP06340 RNU6-1145P-201ENST00000384246 107 ntBASIC3.01□□□□□ -1.93
HLA-DOAP06340 SNORD58.1-201ENST00000391313 66 ntBASIC3.01□□□□□ -1.93
HLA-DOAP06340 AL603908.1-201ENST00000406098 201 ntBASIC3.01□□□□□ -1.93
HLA-DOAP06340 AL139156.1-201ENST00000412785 841 ntBASIC3.01□□□□□ -1.93
HLA-DOAP06340 AL365496.1-201ENST00000426885 215 ntBASIC3.01□□□□□ -1.93
HLA-DOAP06340 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DOAP06340 PRELID3BP1-201ENST00000457142 540 ntBASIC3.01□□□□□ -1.93
HLA-DOAP06340 AC092185.1-201ENST00000491371 97 ntBASIC3.01□□□□□ -1.93
HLA-DOAP06340 AC008413.1-201ENST00000511864 177 ntBASIC3.01□□□□□ -1.93
HLA-DOAP06340 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DOAP06340 SERF1AP1-201ENST00000514575 187 ntBASIC3.01□□□□□ -1.93
HLA-DOAP06340 SNORA31.6-201ENST00000516241 130 ntBASIC3.01□□□□□ -1.93
HLA-DOAP06340 RN7SKP49-201ENST00000516675 260 ntBASIC3.01□□□□□ -1.93
HLA-DOAP06340 RNA5SP380-201ENST00000517190 98 ntBASIC3.01□□□□□ -1.93
HLA-DOAP06340 RRN3P3-201ENST00000549207 578 ntBASIC3.01□□□□□ -1.93
HLA-DOAP06340 AC091544.4-201ENST00000555268 342 ntBASIC3.01□□□□□ -1.93
HLA-DOAP06340 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-DOAP06340 AC025281.1-201ENST00000567026 265 ntBASIC3.01□□□□□ -1.93
HLA-DOAP06340 MIR3945-201ENST00000581853 98 ntBASIC3.01□□□□□ -1.93
HLA-DOAP06340 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DOAP06340 AL512605.2-201ENST00000592972 256 ntBASIC3.01□□□□□ -1.93
HLA-DOAP06340 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.01□□□□□ -1.93
HLA-DOAP06340 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-DOAP06340 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.01□□□□□ -1.93
HLA-DOAP06340 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DOAP06340 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-DOAP06340 AL136164.4-201ENST00000625013 2135 ntBASIC3.01□□□□□ -1.93
HLA-DOAP06340 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
HLA-DOAP06340 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3□□□□□ -1.93
HLA-DOAP06340 SNORD63-201ENST00000384262 68 ntBASIC3□□□□□ -1.93
HLA-DOAP06340 RNA5SP390-201ENST00000410191 113 ntBASIC3□□□□□ -1.93
HLA-DOAP06340 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3□□□□□ -1.93
HLA-DOAP06340 AC012306.1-201ENST00000423267 114 ntBASIC3□□□□□ -1.93
HLA-DOAP06340 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3□□□□□ -1.93
HLA-DOAP06340 AC009414.1-201ENST00000427200 443 ntBASIC3□□□□□ -1.93
HLA-DOAP06340 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3□□□□□ -1.93
HLA-DOAP06340 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 184.4 ms