Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 AL353765.1-201ENST00000605514 183 ntBASIC0.58□□□□□ -2.32
APOA1P02647 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.58□□□□□ -2.32
APOA1P02647 uc_338.17-201ENST00000619633 179 ntBASIC0.58□□□□□ -2.32
APOA1P02647 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
APOA1P02647 RNU6-108P-201ENST00000365558 107 ntBASIC0.57□□□□□ -2.32
APOA1P02647 RNU6-110P-201ENST00000384508 104 ntBASIC0.57□□□□□ -2.32
APOA1P02647 MTCO2P8-201ENST00000412213 658 ntBASIC0.57□□□□□ -2.32
APOA1P02647 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.57□□□□□ -2.32
APOA1P02647 AC004854.1-201ENST00000440356 349 ntBASIC0.57□□□□□ -2.32
APOA1P02647 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.57□□□□□ -2.32
APOA1P02647 RPL39P39-201ENST00000455840 151 ntBASIC0.57□□□□□ -2.32
APOA1P02647 COX6CP14-201ENST00000469580 174 ntBASIC0.57□□□□□ -2.32
APOA1P02647 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.57□□□□□ -2.32
APOA1P02647 AP003072.2-201ENST00000527756 676 ntBASIC0.57□□□□□ -2.32
APOA1P02647 AP003461.1-201ENST00000528866 78 ntBASIC0.57□□□□□ -2.32
APOA1P02647 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.57□□□□□ -2.32
APOA1P02647 MTCO3P23-201ENST00000561363 289 ntBASIC0.57□□□□□ -2.32
APOA1P02647 MIR3682-201ENST00000581338 84 ntBASIC0.57□□□□□ -2.32
APOA1P02647 Z84480.1-201ENST00000605131 311 ntBASIC0.57□□□□□ -2.32
APOA1P02647 AC108706.1-201ENST00000611053 297 ntBASIC0.57□□□□□ -2.32
APOA1P02647 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.57□□□□□ -2.32
APOA1P02647 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.57□□□□□ -2.32
APOA1P02647 AL391987.6-201ENST00000305671 199 ntBASIC0.56□□□□□ -2.32
APOA1P02647 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
APOA1P02647 RNU6-199P-201ENST00000362954 107 ntBASIC0.56□□□□□ -2.32
APOA1P02647 RNU6-1097P-201ENST00000363586 107 ntBASIC0.56□□□□□ -2.32
APOA1P02647 MIR653-201ENST00000385279 96 ntBASIC0.56□□□□□ -2.32
APOA1P02647 RNU6-1106P-201ENST00000390845 107 ntBASIC0.56□□□□□ -2.32
APOA1P02647 AL451046.2-201ENST00000403074 277 ntBASIC0.56□□□□□ -2.32
APOA1P02647 RPS3AP3-201ENST00000411933 242 ntBASIC0.56□□□□□ -2.32
APOA1P02647 CDK8P2-201ENST00000415020 547 ntBASIC0.56□□□□□ -2.32
APOA1P02647 AC008134.1-201ENST00000420943 193 ntBASIC0.56□□□□□ -2.32
APOA1P02647 ISCA1P6-201ENST00000427740 390 ntBASIC0.56□□□□□ -2.32
APOA1P02647 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.56□□□□□ -2.32
APOA1P02647 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.56□□□□□ -2.32
APOA1P02647 MTCO2P3-201ENST00000442543 421 ntBASIC0.56□□□□□ -2.32
APOA1P02647 RPS27P22-201ENST00000478056 241 ntBASIC0.56□□□□□ -2.32
APOA1P02647 AC117454.1-201ENST00000491120 168 ntBASIC0.56□□□□□ -2.32
APOA1P02647 AC005840.1-201ENST00000498412 377 ntBASIC0.56□□□□□ -2.32
APOA1P02647 RPL39P5-202ENST00000512505 151 ntBASIC0.56□□□□□ -2.32
APOA1P02647 AC010493.1-201ENST00000513479 292 ntBASIC0.56□□□□□ -2.32
APOA1P02647 RNU6-311P-201ENST00000516224 102 ntBASIC0.56□□□□□ -2.32
APOA1P02647 AC025647.1-201ENST00000517879 253 ntBASIC0.56□□□□□ -2.32
APOA1P02647 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.56□□□□□ -2.32
APOA1P02647 AC090049.2-201ENST00000550377 109 ntBASIC0.56□□□□□ -2.32
APOA1P02647 AL078596.1-201ENST00000624856 447 ntBASIC0.56□□□□□ -2.32
APOA1P02647 snoZ196.1-201ENST00000625269 89 ntBASIC0.56□□□□□ -2.32
APOA1P02647 RNU6-1240P-201ENST00000365155 104 ntBASIC0.55□□□□□ -2.32
APOA1P02647 RNU4-48P-201ENST00000365559 182 ntBASIC0.55□□□□□ -2.32
APOA1P02647 RNU6-1186P-201ENST00000410429 97 ntBASIC0.55□□□□□ -2.32
APOA1P02647 RNA5SP494-201ENST00000410653 129 ntBASIC0.55□□□□□ -2.32
APOA1P02647 RPS26P42-201ENST00000413485 326 ntBASIC0.55□□□□□ -2.32
APOA1P02647 MTND3P17-201ENST00000416968 344 ntBASIC0.55□□□□□ -2.32
APOA1P02647 AC004941.2-201ENST00000427009 228 ntBASIC0.55□□□□□ -2.32
APOA1P02647 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.55□□□□□ -2.32
APOA1P02647 RPEP5-201ENST00000441137 268 ntBASIC0.55□□□□□ -2.32
APOA1P02647 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.55□□□□□ -2.32
APOA1P02647 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.55□□□□□ -2.32
APOA1P02647 RNU7-21P-201ENST00000459430 62 ntBASIC0.55□□□□□ -2.32
APOA1P02647 RNU4-54P-201ENST00000516428 129 ntBASIC0.55□□□□□ -2.32
APOA1P02647 RNU6-612P-201ENST00000516909 102 ntBASIC0.55□□□□□ -2.32
APOA1P02647 MIR3973-201ENST00000579824 107 ntBASIC0.55□□□□□ -2.32
APOA1P02647 MIR3941-201ENST00000582572 103 ntBASIC0.55□□□□□ -2.32
APOA1P02647 MIR98-201ENST00000606724 119 ntBASIC0.55□□□□□ -2.32
APOA1P02647 AC006566.1-201ENST00000608943 513 ntBASIC0.55□□□□□ -2.32
APOA1P02647 MTND4P5-201ENST00000435821 1374 ntBASIC0.55□□□□□ -2.32
APOA1P02647 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
APOA1P02647 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC0.54□□□□□ -2.32
APOA1P02647 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.54□□□□□ -2.32
APOA1P02647 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.54□□□□□ -2.32
APOA1P02647 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.54□□□□□ -2.32
APOA1P02647 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.54□□□□□ -2.32
APOA1P02647 RNU7-90P-201ENST00000459216 62 ntBASIC0.54□□□□□ -2.32
APOA1P02647 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.54□□□□□ -2.32
APOA1P02647 RNA5SP121-201ENST00000516537 101 ntBASIC0.54□□□□□ -2.32
APOA1P02647 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.54□□□□□ -2.32
APOA1P02647 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.54□□□□□ -2.32
APOA1P02647 MIR548AB-201ENST00000584917 84 ntBASIC0.54□□□□□ -2.32
APOA1P02647 AC068790.2-201ENST00000602601 557 ntBASIC0.54□□□□□ -2.32
APOA1P02647 AL357312.1-201ENST00000603879 298 ntBASIC0.54□□□□□ -2.32
APOA1P02647 AL022161.1-201ENST00000604390 213 ntBASIC0.54□□□□□ -2.32
APOA1P02647 AP000720.1-201ENST00000625091 483 ntBASIC0.54□□□□□ -2.32
APOA1P02647 AP000568.1-201ENST00000282964 442 ntBASIC0.53□□□□□ -2.32
APOA1P02647 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
APOA1P02647 RNU5B-2P-201ENST00000363036 113 ntBASIC0.53□□□□□ -2.32
APOA1P02647 RNU6-53P-201ENST00000365367 106 ntBASIC0.53□□□□□ -2.32
APOA1P02647 RNU6-1080P-201ENST00000383982 107 ntBASIC0.53□□□□□ -2.32
APOA1P02647 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
APOA1P02647 AC106883.1-201ENST00000418805 562 ntBASIC0.53□□□□□ -2.32
APOA1P02647 AC108667.1-201ENST00000428618 249 ntBASIC0.53□□□□□ -2.32
APOA1P02647 AL035398.1-201ENST00000430869 322 ntBASIC0.53□□□□□ -2.32
APOA1P02647 RPL31P35-201ENST00000431058 377 ntBASIC0.53□□□□□ -2.32
APOA1P02647 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.53□□□□□ -2.32
APOA1P02647 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.53□□□□□ -2.32
APOA1P02647 AC004584.2-201ENST00000570407 410 ntBASIC0.53□□□□□ -2.32
APOA1P02647 MTND1P8-201ENST00000571424 950 ntBASIC0.53□□□□□ -2.32
APOA1P02647 AL162424.1-201ENST00000602325 221 ntBASIC0.53□□□□□ -2.32
APOA1P02647 SNRPGP20-201ENST00000604477 205 ntBASIC0.53□□□□□ -2.32
APOA1P02647 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.53□□□□□ -2.32
APOA1P02647 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms