Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 MTCO1P19-201ENST00000443487 500 ntBASIC-0.28□□□□□ -2.45
SPTA1P02549 ZNF886P-201ENST00000450781 723 ntBASIC-0.28□□□□□ -2.45
SPTA1P02549 PCNPP5-201ENST00000452246 481 ntBASIC-0.28□□□□□ -2.45
SPTA1P02549 HMGN2P26-201ENST00000463169 339 ntBASIC-0.28□□□□□ -2.45
SPTA1P02549 RNU6-143P-201ENST00000516942 93 ntBASIC-0.28□□□□□ -2.45
SPTA1P02549 SNRPGP1-201ENST00000553864 222 ntBASIC-0.28□□□□□ -2.45
SPTA1P02549 AC092325.1-201ENST00000566449 554 ntBASIC-0.28□□□□□ -2.45
SPTA1P02549 MIR4804-201ENST00000581683 73 ntBASIC-0.28□□□□□ -2.45
SPTA1P02549 AL117336.2-201ENST00000602435 335 ntBASIC-0.28□□□□□ -2.45
SPTA1P02549 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.28□□□□□ -2.45
SPTA1P02549 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-0.28□□□□□ -2.45
SPTA1P02549 SNORD56.1-201ENST00000362913 68 ntBASIC-0.28□□□□□ -2.45
SPTA1P02549 RNU6-853P-201ENST00000364306 107 ntBASIC-0.28□□□□□ -2.45
SPTA1P02549 RNU6-756P-201ENST00000383997 107 ntBASIC-0.28□□□□□ -2.45
SPTA1P02549 MIR196A2-201ENST00000385189 110 ntBASIC-0.28□□□□□ -2.45
SPTA1P02549 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.28□□□□□ -2.45
SPTA1P02549 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.28□□□□□ -2.45
SPTA1P02549 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.28□□□□□ -2.45
SPTA1P02549 snoU13.8-201ENST00000458890 104 ntBASIC-0.28□□□□□ -2.45
SPTA1P02549 AC114811.1-201ENST00000507207 168 ntBASIC-0.28□□□□□ -2.45
SPTA1P02549 RBBP4P6-201ENST00000508098 202 ntBASIC-0.28□□□□□ -2.45
SPTA1P02549 RNU6-1041P-201ENST00000516254 102 ntBASIC-0.28□□□□□ -2.45
SPTA1P02549 RNU6-977P-201ENST00000516411 103 ntBASIC-0.28□□□□□ -2.45
SPTA1P02549 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC-0.28□□□□□ -2.45
SPTA1P02549 ZNF321P-202ENST00000550843 495 ntBASIC-0.28□□□□□ -2.45
SPTA1P02549 AC004223.2-201ENST00000590309 544 ntBASIC-0.28□□□□□ -2.45
SPTA1P02549 AC092447.9-201ENST00000603395 144 ntBASIC-0.28□□□□□ -2.45
SPTA1P02549 AL355816.2-201ENST00000610049 647 ntBASIC-0.28□□□□□ -2.45
SPTA1P02549 AL513423.1-201ENST00000621695 132 ntBASIC-0.28□□□□□ -2.45
SPTA1P02549 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-0.28□□□□□ -2.45
SPTA1P02549 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-0.28□□□□□ -2.45
SPTA1P02549 RNU6-40P-201ENST00000384254 107 ntBASIC-0.29□□□□□ -2.46
SPTA1P02549 RN7SKP266-201ENST00000410232 287 ntBASIC-0.29□□□□□ -2.46
SPTA1P02549 RNU4-22P-201ENST00000411058 166 ntBASIC-0.29□□□□□ -2.46
SPTA1P02549 RNU6-57P-201ENST00000411348 103 ntBASIC-0.29□□□□□ -2.46
SPTA1P02549 AC016909.1-201ENST00000415916 166 ntBASIC-0.29□□□□□ -2.46
SPTA1P02549 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-0.29□□□□□ -2.46
SPTA1P02549 MTND1P20-201ENST00000430341 950 ntBASIC-0.29□□□□□ -2.46
SPTA1P02549 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC-0.29□□□□□ -2.46
SPTA1P02549 AL606517.2-201ENST00000442855 241 ntBASIC-0.29□□□□□ -2.46
SPTA1P02549 RNU6-1069P-201ENST00000516612 133 ntBASIC-0.29□□□□□ -2.46
SPTA1P02549 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-0.29□□□□□ -2.46
SPTA1P02549 PART1_2.1-201ENST00000612397 250 ntBASIC-0.29□□□□□ -2.46
SPTA1P02549 AC006927.4-201ENST00000639187 543 ntBASIC-0.29□□□□□ -2.46
SPTA1P02549 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.29□□□□□ -2.46
SPTA1P02549 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
SPTA1P02549 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.29□□□□□ -2.46
SPTA1P02549 Y_RNA.234-201ENST00000364409 97 ntBASIC-0.29□□□□□ -2.46
SPTA1P02549 RNU6-622P-201ENST00000384272 103 ntBASIC-0.29□□□□□ -2.46
SPTA1P02549 RNU6-1207P-201ENST00000384343 107 ntBASIC-0.29□□□□□ -2.46
SPTA1P02549 MIR587-201ENST00000384845 96 ntBASIC-0.29□□□□□ -2.46
SPTA1P02549 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.29□□□□□ -2.46
SPTA1P02549 RNU4-46P-201ENST00000410818 138 ntBASIC-0.29□□□□□ -2.46
SPTA1P02549 MTCO2P5-201ENST00000422621 426 ntBASIC-0.29□□□□□ -2.46
SPTA1P02549 AL353777.1-201ENST00000425552 326 ntBASIC-0.29□□□□□ -2.46
SPTA1P02549 AL133217.1-201ENST00000450980 425 ntBASIC-0.29□□□□□ -2.46
SPTA1P02549 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC-0.29□□□□□ -2.46
SPTA1P02549 RNU7-165P-201ENST00000458864 60 ntBASIC-0.29□□□□□ -2.46
SPTA1P02549 RNU2-12P-201ENST00000517216 168 ntBASIC-0.29□□□□□ -2.46
SPTA1P02549 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.29□□□□□ -2.46
SPTA1P02549 AC012507.3-201ENST00000603556 477 ntBASIC-0.29□□□□□ -2.46
SPTA1P02549 AL158042.1-201ENST00000605338 460 ntBASIC-0.29□□□□□ -2.46
SPTA1P02549 AC138749.5-201ENST00000611461 208 ntBASIC-0.29□□□□□ -2.46
SPTA1P02549 AL355073.2-201ENST00000612106 557 ntBASIC-0.29□□□□□ -2.46
SPTA1P02549 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.3□□□□□ -2.46
SPTA1P02549 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.3□□□□□ -2.46
SPTA1P02549 RNA5SP275-201ENST00000363936 118 ntBASIC-0.3□□□□□ -2.46
SPTA1P02549 SNORD32B-201ENST00000364460 84 ntBASIC-0.3□□□□□ -2.46
SPTA1P02549 RNU5E-7P-201ENST00000365290 117 ntBASIC-0.3□□□□□ -2.46
SPTA1P02549 SNORD14C-201ENST00000365382 88 ntBASIC-0.3□□□□□ -2.46
SPTA1P02549 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.3□□□□□ -2.46
SPTA1P02549 MIR1283-1-201ENST00000408494 87 ntBASIC-0.3□□□□□ -2.46
SPTA1P02549 BX119904.4-201ENST00000424402 301 ntBASIC-0.3□□□□□ -2.46
SPTA1P02549 AC245047.3-201ENST00000429428 127 ntBASIC-0.3□□□□□ -2.46
SPTA1P02549 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.3□□□□□ -2.46
SPTA1P02549 MRPS36P4-201ENST00000534436 298 ntBASIC-0.3□□□□□ -2.46
SPTA1P02549 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.3□□□□□ -2.46
SPTA1P02549 MIR5697-201ENST00000578045 78 ntBASIC-0.3□□□□□ -2.46
SPTA1P02549 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.3□□□□□ -2.46
SPTA1P02549 RNU6-839P-201ENST00000363347 108 ntBASIC-0.3□□□□□ -2.46
SPTA1P02549 RNU6-166P-201ENST00000384371 107 ntBASIC-0.3□□□□□ -2.46
SPTA1P02549 SNORA26-201ENST00000391286 122 ntBASIC-0.3□□□□□ -2.46
SPTA1P02549 MTCO2P1-201ENST00000424648 477 ntBASIC-0.3□□□□□ -2.46
SPTA1P02549 RNU6-572P-201ENST00000516724 80 ntBASIC-0.3□□□□□ -2.46
SPTA1P02549 SUMO2P18-201ENST00000518873 252 ntBASIC-0.3□□□□□ -2.46
SPTA1P02549 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC-0.3□□□□□ -2.46
SPTA1P02549 AL133153.1-201ENST00000557756 303 ntBASIC-0.3□□□□□ -2.46
SPTA1P02549 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC-0.3□□□□□ -2.46
SPTA1P02549 AL357312.1-201ENST00000603879 298 ntBASIC-0.3□□□□□ -2.46
SPTA1P02549 AC121334.2-201ENST00000605387 271 ntBASIC-0.3□□□□□ -2.46
SPTA1P02549 AP000676.3-201ENST00000623299 569 ntBASIC-0.3□□□□□ -2.46
SPTA1P02549 RNU6-216P-201ENST00000363282 104 ntBASIC-0.31□□□□□ -2.46
SPTA1P02549 RNU6-269P-201ENST00000391077 97 ntBASIC-0.31□□□□□ -2.46
SPTA1P02549 AC068533.2-201ENST00000411872 306 ntBASIC-0.31□□□□□ -2.46
SPTA1P02549 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.31□□□□□ -2.46
SPTA1P02549 MTCYBP10-201ENST00000424905 650 ntBASIC-0.31□□□□□ -2.46
SPTA1P02549 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-0.31□□□□□ -2.46
SPTA1P02549 RPL17P35-201ENST00000432217 549 ntBASIC-0.31□□□□□ -2.46
SPTA1P02549 RNU7-56P-201ENST00000458744 62 ntBASIC-0.31□□□□□ -2.46
SPTA1P02549 AC007547.1-201ENST00000462177 490 ntBASIC-0.31□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms