| HPRT1 | P00492 | RNU6-956P-201 | ENST00000458868 | 103 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | RPS3AP17-201 | ENST00000472594 | 777 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | BET1P1-201 | ENST00000482276 | 359 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | AC110799.1-201 | ENST00000509098 | 449 nt | TSL 3 BASIC | 1.02 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | NTS-203 | ENST00000551529 | 801 nt | TSL 3 BASIC | 1.02 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | AL442163.3-201 | ENST00000554110 | 156 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | SCOCP1-201 | ENST00000554676 | 349 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | AL121757.2-201 | ENST00000611223 | 313 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | AC009033.1-201 | ENST00000624279 | 431 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | RNU6-82P-201 | ENST00000363970 | 107 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | Y_RNA.378-201 | ENST00000365652 | 113 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | SNORA40.6-201 | ENST00000391153 | 128 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | AL049545.1-201 | ENST00000401856 | 572 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | LINC01853-201 | ENST00000417715 | 444 nt | TSL 3 BASIC | 1.01 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | AC000123.1-201 | ENST00000418215 | 516 nt | TSL 5 BASIC | 1.01 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | TOMM22P2-201 | ENST00000430735 | 237 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | AF186996.7-201 | ENST00000492781 | 209 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | AL133373.1-201 | ENST00000497098 | 94 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | RNA5SP401-201 | ENST00000515920 | 127 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | SNORA40.12-201 | ENST00000516329 | 111 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | LINC02095-202 | ENST00000543512 | 323 nt | TSL 3 BASIC | 1.01 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | AL512310.8-201 | ENST00000550183 | 120 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | AC121247.2-201 | ENST00000604776 | 136 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | AC040896.1-201 | ENST00000613819 | 479 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | TEX41-243 | ENST00000614173 | 190 nt | TSL 5 BASIC | 1.01 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | C9orf84-201 | ENST00000318737 | 4661 nt | APPRIS P3 TSL 1 (best) BASIC | 1.01 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | CCDC68-202 | ENST00000432185 | 4014 nt | APPRIS P1 TSL 1 (best) BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | RNU6-534P-201 | ENST00000364877 | 106 nt | BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | RNU4-66P-201 | ENST00000365199 | 138 nt | BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | RNA5SP259-201 | ENST00000365541 | 109 nt | BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | TRAJ6-201 | ENST00000390531 | 62 nt | APPRIS P1 BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | RNA5SP467-201 | ENST00000391274 | 118 nt | BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | DEFB110-202 | ENST00000393660 | 189 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | MIR1253-201 | ENST00000408273 | 105 nt | BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | RNU6-57P-201 | ENST00000411348 | 103 nt | BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | MRPL35P3-201 | ENST00000421557 | 364 nt | BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | TIMM9P3-201 | ENST00000428659 | 274 nt | BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | AF124730.1-201 | ENST00000430001 | 327 nt | TSL 2 BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | AL603839.2-201 | ENST00000437060 | 546 nt | TSL 5 BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | LINC00971-201 | ENST00000482721 | 535 nt | TSL 2 BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | AL163195.1-201 | ENST00000496941 | 348 nt | BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | HMGN1P12-201 | ENST00000499125 | 195 nt | BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | SRP72-202 | ENST00000504757 | 745 nt | TSL 2 BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | HMGB1P29-201 | ENST00000505659 | 499 nt | BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | SNORA19.2-201 | ENST00000516013 | 114 nt | BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | RNU6-1146P-201 | ENST00000516282 | 102 nt | BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | AC090124.1-201 | ENST00000525097 | 448 nt | TSL 3 BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | AC011092.2-201 | ENST00000533659 | 586 nt | TSL 1 (best) BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | RAB11AP2-201 | ENST00000545905 | 639 nt | BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | AL157687.1-201 | ENST00000554853 | 619 nt | BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | PWRN1-205 | ENST00000565295 | 465 nt | TSL 3 BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | FGF7P1-201 | ENST00000582820 | 288 nt | BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | MIR3660-201 | ENST00000584845 | 100 nt | BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | MIR5692C1-201 | ENST00000585309 | 91 nt | BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | EAF1-AS1-207 | ENST00000599742 | 772 nt | TSL 5 BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | AL355802.3-201 | ENST00000607571 | 545 nt | BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | AC009509.4-201 | ENST00000619202 | 509 nt | BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | FAS-AS1.2-201 | ENST00000620386 | 170 nt | BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | AC138058.1-201 | ENST00000620572 | 449 nt | TSL 3 BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | AC139792.3-201 | ENST00000623525 | 224 nt | BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | LINC01359-207 | ENST00000634799 | 487 nt | TSL 5 BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | OR5AK4P-201 | ENST00000635912 | 903 nt | BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | IL6ST-203 | ENST00000381287 | 8667 nt | TSL 5 BASIC | 1 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | Y_RNA.287-201 | ENST00000364853 | 94 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | RNU6-38P-201 | ENST00000384085 | 107 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | RNY3P9-201 | ENST00000384727 | 106 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | MIR515-2-201 | ENST00000384883 | 83 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | MIR515-1-201 | ENST00000384884 | 83 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | MIR521-1-201 | ENST00000384902 | 87 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | TRAJ41-201 | ENST00000390496 | 62 nt | APPRIS P1 BASIC | 0.99 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | RNA5SP109-201 | ENST00000391010 | 116 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | RNA5SP323-201 | ENST00000391094 | 133 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | RNU6-325P-201 | ENST00000411132 | 105 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | PLCL2-AS1-201 | ENST00000414844 | 311 nt | TSL 2 BASIC | 0.99 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | AC035139.1-201 | ENST00000423256 | 273 nt | TSL 3 BASIC | 0.99 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | MRPS10P2-201 | ENST00000431226 | 381 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | AL136972.1-201 | ENST00000443471 | 351 nt | TSL 3 BASIC | 0.99 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | AC074290.1-201 | ENST00000448883 | 135 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | RNU7-57P-201 | ENST00000459540 | 60 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | SRRM1P2-201 | ENST00000464531 | 1192 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | AC004223.1-201 | ENST00000479840 | 271 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | RN7SKP298-201 | ENST00000515950 | 94 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | AC090821.2-201 | ENST00000523552 | 176 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | CARD18-202 | ENST00000530950 | 652 nt | APPRIS P1 TSL 5 BASIC | 0.99 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | PARPBP-209 | ENST00000537257 | 976 nt | TSL 1 (best) BASIC | 0.99 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | AC112481.1-201 | ENST00000549669 | 901 nt | TSL 2 BASIC | 0.99 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | MIR4742-201 | ENST00000581069 | 85 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | MIR4303-201 | ENST00000581299 | 66 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | MZT1P2-201 | ENST00000604387 | 248 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | SNRPGP20-201 | ENST00000604477 | 205 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | AC097065.2-201 | ENST00000608159 | 533 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | AC063944.3-201 | ENST00000609969 | 533 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | MIR8065-201 | ENST00000620577 | 100 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | AC068792.1-201 | ENST00000621354 | 417 nt | BASIC | 0.99 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | MTND4P5-201 | ENST00000435821 | 1374 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | MIR487A-201 | ENST00000385009 | 80 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | MIR586-201 | ENST00000385035 | 97 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | MIR618-201 | ENST00000385287 | 98 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | AL356776.1-201 | ENST00000406574 | 447 nt | BASIC | 0.98 | □□□□□ -2.25 | | |
| HPRT1 | P00492 | RNU4-55P-201 | ENST00000410731 | 137 nt | BASIC | 0.98 | □□□□□ -2.25 | | |