Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 MIR7157-201ENST00000635801 60 ntBASIC2.14□□□□□ -2.07
CLPTM1O96005 IGHVIII-44-202ENST00000636235 289 ntBASIC2.14□□□□□ -2.07
CLPTM1O96005 AL359851.1-201ENST00000569460 4997 ntBASIC2.14□□□□□ -2.07
CLPTM1O96005 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
CLPTM1O96005 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.14□□□□□ -2.07
CLPTM1O96005 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CLPTM1O96005 RNU4-56P-201ENST00000364700 142 ntBASIC2.13□□□□□ -2.07
CLPTM1O96005 Y_RNA.326-201ENST00000365176 113 ntBASIC2.13□□□□□ -2.07
CLPTM1O96005 U8.10-201ENST00000384260 133 ntBASIC2.13□□□□□ -2.07
CLPTM1O96005 MIR518C-201ENST00000384822 101 ntBASIC2.13□□□□□ -2.07
CLPTM1O96005 SNORA46.1-201ENST00000391069 153 ntBASIC2.13□□□□□ -2.07
CLPTM1O96005 SNORA12-201ENST00000391162 147 ntBASIC2.13□□□□□ -2.07
CLPTM1O96005 MIR190B-201ENST00000401119 79 ntBASIC2.13□□□□□ -2.07
CLPTM1O96005 MIR208B-201ENST00000401172 77 ntBASIC2.13□□□□□ -2.07
CLPTM1O96005 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.13□□□□□ -2.07
CLPTM1O96005 MCFD2P1-201ENST00000417812 300 ntBASIC2.13□□□□□ -2.07
CLPTM1O96005 AC099799.1-201ENST00000439809 192 ntBASIC2.13□□□□□ -2.07
CLPTM1O96005 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.13□□□□□ -2.07
CLPTM1O96005 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.13□□□□□ -2.07
CLPTM1O96005 CHEK2P4-201ENST00000450340 246 ntBASIC2.13□□□□□ -2.07
CLPTM1O96005 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.13□□□□□ -2.07
CLPTM1O96005 RNA5SP233-201ENST00000459153 113 ntBASIC2.13□□□□□ -2.07
CLPTM1O96005 RNU7-87P-201ENST00000459343 62 ntBASIC2.13□□□□□ -2.07
CLPTM1O96005 AC145146.1-201ENST00000496370 254 ntBASIC2.13□□□□□ -2.07
CLPTM1O96005 RPL23AP94-201ENST00000512518 302 ntBASIC2.13□□□□□ -2.07
CLPTM1O96005 RNU1-40P-201ENST00000516816 164 ntBASIC2.13□□□□□ -2.07
CLPTM1O96005 RNU1-97P-201ENST00000516872 164 ntBASIC2.13□□□□□ -2.07
CLPTM1O96005 Y_RNA.706-201ENST00000516933 99 ntBASIC2.13□□□□□ -2.07
CLPTM1O96005 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.13□□□□□ -2.07
CLPTM1O96005 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.13□□□□□ -2.07
CLPTM1O96005 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.13□□□□□ -2.07
CLPTM1O96005 MIR4448-201ENST00000584360 86 ntBASIC2.13□□□□□ -2.07
CLPTM1O96005 AC092447.9-201ENST00000603395 144 ntBASIC2.13□□□□□ -2.07
CLPTM1O96005 AL713866.2-201ENST00000603579 219 ntBASIC2.13□□□□□ -2.07
CLPTM1O96005 AC100812.1-201ENST00000607622 580 ntBASIC2.13□□□□□ -2.07
CLPTM1O96005 AL162373.1-201ENST00000620433 407 ntBASIC2.13□□□□□ -2.07
CLPTM1O96005 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.13□□□□□ -2.07
CLPTM1O96005 AC091925.1-201ENST00000623204 462 ntBASIC2.13□□□□□ -2.07
CLPTM1O96005 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.13□□□□□ -2.07
CLPTM1O96005 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CLPTM1O96005 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
CLPTM1O96005 ZNF72P-201ENST00000425869 1908 ntBASIC2.13□□□□□ -2.07
CLPTM1O96005 RNU4-82P-201ENST00000362443 140 ntBASIC2.12□□□□□ -2.07
CLPTM1O96005 Y_RNA.28-201ENST00000362554 111 ntBASIC2.12□□□□□ -2.07
CLPTM1O96005 Y_RNA.80-201ENST00000362996 102 ntBASIC2.12□□□□□ -2.07
CLPTM1O96005 Y_RNA.106-201ENST00000363189 100 ntBASIC2.12□□□□□ -2.07
CLPTM1O96005 SNORD115-32-201ENST00000364079 82 ntBASIC2.12□□□□□ -2.07
CLPTM1O96005 SNORA16B-201ENST00000364674 135 ntBASIC2.12□□□□□ -2.07
CLPTM1O96005 RNU4-42P-201ENST00000364738 142 ntBASIC2.12□□□□□ -2.07
CLPTM1O96005 RNU6-378P-201ENST00000384324 107 ntBASIC2.12□□□□□ -2.07
CLPTM1O96005 Y_RNA.485-201ENST00000384395 102 ntBASIC2.12□□□□□ -2.07
CLPTM1O96005 MIR625-201ENST00000385047 85 ntBASIC2.12□□□□□ -2.07
CLPTM1O96005 RNA5SP201-201ENST00000410316 124 ntBASIC2.12□□□□□ -2.07
CLPTM1O96005 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.12□□□□□ -2.07
CLPTM1O96005 MTND4P19-201ENST00000446659 478 ntBASIC2.12□□□□□ -2.07
CLPTM1O96005 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.12□□□□□ -2.07
CLPTM1O96005 OR2AQ1P-201ENST00000451972 200 ntBASIC2.12□□□□□ -2.07
CLPTM1O96005 U8.22-201ENST00000459141 133 ntBASIC2.12□□□□□ -2.07
CLPTM1O96005 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.12□□□□□ -2.07
CLPTM1O96005 RNA5SP364-201ENST00000516938 78 ntBASIC2.12□□□□□ -2.07
CLPTM1O96005 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.12□□□□□ -2.07
CLPTM1O96005 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.12□□□□□ -2.07
CLPTM1O96005 CYP4A27P-201ENST00000567218 190 ntBASIC2.12□□□□□ -2.07
CLPTM1O96005 AC002984.1-201ENST00000591692 448 ntBASIC2.12□□□□□ -2.07
CLPTM1O96005 AC016925.2-201ENST00000605108 242 ntBASIC2.12□□□□□ -2.07
CLPTM1O96005 AC069294.1-201ENST00000608397 350 ntBASIC2.12□□□□□ -2.07
CLPTM1O96005 AC087588.2-201ENST00000617667 426 ntBASIC2.12□□□□□ -2.07
CLPTM1O96005 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CLPTM1O96005 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.12□□□□□ -2.07
CLPTM1O96005 MTND5P16-201ENST00000460269 1703 ntBASIC2.11□□□□□ -2.07
CLPTM1O96005 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CLPTM1O96005 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.11□□□□□ -2.07
CLPTM1O96005 Y_RNA.358-201ENST00000365491 99 ntBASIC2.11□□□□□ -2.07
CLPTM1O96005 RNU6-17P-201ENST00000384245 107 ntBASIC2.11□□□□□ -2.07
CLPTM1O96005 RNU6-18P-201ENST00000384527 107 ntBASIC2.11□□□□□ -2.07
CLPTM1O96005 RNU6-1274P-201ENST00000384557 107 ntBASIC2.11□□□□□ -2.07
CLPTM1O96005 MIR153-2-201ENST00000385225 87 ntBASIC2.11□□□□□ -2.07
CLPTM1O96005 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.11□□□□□ -2.07
CLPTM1O96005 RPL23AP7-203ENST00000449021 469 ntBASIC2.11□□□□□ -2.07
CLPTM1O96005 AC025033.1-201ENST00000463883 194 ntBASIC2.11□□□□□ -2.07
CLPTM1O96005 AP000870.1-201ENST00000472927 406 ntBASIC2.11□□□□□ -2.07
CLPTM1O96005 RNU4-77P-201ENST00000516692 156 ntBASIC2.11□□□□□ -2.07
CLPTM1O96005 RNU6-567P-201ENST00000516746 107 ntBASIC2.11□□□□□ -2.07
CLPTM1O96005 RNU7-4P-201ENST00000516961 62 ntBASIC2.11□□□□□ -2.07
CLPTM1O96005 AC027288.2-201ENST00000553028 243 ntBASIC2.11□□□□□ -2.07
CLPTM1O96005 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.11□□□□□ -2.07
CLPTM1O96005 UBL5P4-201ENST00000562584 236 ntBASIC2.11□□□□□ -2.07
CLPTM1O96005 MIR3923-201ENST00000579521 83 ntBASIC2.11□□□□□ -2.07
CLPTM1O96005 AC078899.2-201ENST00000595282 212 ntBASIC2.11□□□□□ -2.07
CLPTM1O96005 AC022432.1-201ENST00000595739 310 ntBASIC2.11□□□□□ -2.07
CLPTM1O96005 SNORD58B-201ENST00000607313 66 ntBASIC2.11□□□□□ -2.07
CLPTM1O96005 RMST_6.1-201ENST00000611980 203 ntBASIC2.11□□□□□ -2.07
CLPTM1O96005 AC083806.3-201ENST00000614016 455 ntBASIC2.11□□□□□ -2.07
CLPTM1O96005 SDR42E1P4-201ENST00000620894 481 ntBASIC2.11□□□□□ -2.07
CLPTM1O96005 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CLPTM1O96005 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
CLPTM1O96005 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
CLPTM1O96005 RNU6-944P-201ENST00000364023 107 ntBASIC2.1□□□□□ -2.07
CLPTM1O96005 Y_RNA.319-201ENST00000365138 92 ntBASIC2.1□□□□□ -2.07
CLPTM1O96005 Y_RNA.364-201ENST00000365532 101 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms