Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 RNU6-191P-201ENST00000516295 94 ntBASIC3.19□□□□□ -1.9
CNOT4O95628 AC115990.1-201ENST00000526957 301 ntBASIC3.19□□□□□ -1.9
CNOT4O95628 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.19□□□□□ -1.9
CNOT4O95628 MIR5692C2-201ENST00000577959 77 ntBASIC3.19□□□□□ -1.9
CNOT4O95628 MIR3145-201ENST00000580727 82 ntBASIC3.19□□□□□ -1.9
CNOT4O95628 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.19□□□□□ -1.9
CNOT4O95628 AC091152.3-201ENST00000604227 325 ntBASIC3.19□□□□□ -1.9
CNOT4O95628 AL365265.1-201ENST00000621045 234 ntBASIC3.19□□□□□ -1.9
CNOT4O95628 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CNOT4O95628 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.18□□□□□ -1.9
CNOT4O95628 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.18□□□□□ -1.9
CNOT4O95628 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CNOT4O95628 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.18□□□□□ -1.9
CNOT4O95628 RNU6-1083P-201ENST00000384022 107 ntBASIC3.18□□□□□ -1.9
CNOT4O95628 RNU6-211P-201ENST00000384047 107 ntBASIC3.18□□□□□ -1.9
CNOT4O95628 Y_RNA.441-201ENST00000384123 112 ntBASIC3.18□□□□□ -1.9
CNOT4O95628 RNU6-1081P-201ENST00000384537 107 ntBASIC3.18□□□□□ -1.9
CNOT4O95628 U3.26-201ENST00000391236 204 ntBASIC3.18□□□□□ -1.9
CNOT4O95628 AL512633.1-201ENST00000399931 655 ntBASIC3.18□□□□□ -1.9
CNOT4O95628 U3.39-201ENST00000408569 239 ntBASIC3.18□□□□□ -1.9
CNOT4O95628 RN7SKP111-201ENST00000410349 271 ntBASIC3.18□□□□□ -1.9
CNOT4O95628 AL451074.5-201ENST00000415894 435 ntBASIC3.18□□□□□ -1.9
CNOT4O95628 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.18□□□□□ -1.9
CNOT4O95628 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.18□□□□□ -1.9
CNOT4O95628 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.18□□□□□ -1.9
CNOT4O95628 BX510359.1-201ENST00000456973 237 ntBASIC3.18□□□□□ -1.9
CNOT4O95628 RPS27P29-201ENST00000463110 252 ntBASIC3.18□□□□□ -1.9
CNOT4O95628 AC091179.3-201ENST00000474761 144 ntBASIC3.18□□□□□ -1.9
CNOT4O95628 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.18□□□□□ -1.9
CNOT4O95628 SCARNA17.1-201ENST00000516211 143 ntBASIC3.18□□□□□ -1.9
CNOT4O95628 SCARNA17.2-201ENST00000516334 143 ntBASIC3.18□□□□□ -1.9
CNOT4O95628 AL356575.1-201ENST00000603008 283 ntBASIC3.18□□□□□ -1.9
CNOT4O95628 SCARNA17.4-201ENST00000614296 143 ntBASIC3.18□□□□□ -1.9
CNOT4O95628 AC091932.3-201ENST00000624223 323 ntBASIC3.18□□□□□ -1.9
CNOT4O95628 snoU18.1-201ENST00000629629 71 ntBASIC3.18□□□□□ -1.9
CNOT4O95628 MIR3651-201ENST00000630427 90 ntBASIC3.18□□□□□ -1.9
CNOT4O95628 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.18□□□□□ -1.9
CNOT4O95628 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CNOT4O95628 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CNOT4O95628 SNORD9-201ENST00000362566 104 ntBASIC3.17□□□□□ -1.9
CNOT4O95628 RNU6-81P-201ENST00000365608 104 ntBASIC3.17□□□□□ -1.9
CNOT4O95628 AL031121.1-201ENST00000406553 254 ntBASIC3.17□□□□□ -1.9
CNOT4O95628 AL357139.1-201ENST00000407792 426 ntBASIC3.17□□□□□ -1.9
CNOT4O95628 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.17□□□□□ -1.9
CNOT4O95628 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.17□□□□□ -1.9
CNOT4O95628 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.17□□□□□ -1.9
CNOT4O95628 RBMY2UP-201ENST00000453474 324 ntBASIC3.17□□□□□ -1.9
CNOT4O95628 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.17□□□□□ -1.9
CNOT4O95628 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.17□□□□□ -1.9
CNOT4O95628 RNU6-155P-201ENST00000516347 100 ntBASIC3.17□□□□□ -1.9
CNOT4O95628 SCARNA11.3-201ENST00000517276 130 ntBASIC3.17□□□□□ -1.9
CNOT4O95628 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.17□□□□□ -1.9
CNOT4O95628 CYP4A27P-201ENST00000567218 190 ntBASIC3.17□□□□□ -1.9
CNOT4O95628 AC004467.1-201ENST00000615678 330 ntBASIC3.17□□□□□ -1.9
CNOT4O95628 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.17□□□□□ -1.9
CNOT4O95628 AC002543.1-201ENST00000299783 1954 ntBASIC3.17□□□□□ -1.9
CNOT4O95628 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CNOT4O95628 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CNOT4O95628 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CNOT4O95628 RNU6-653P-201ENST00000363074 106 ntBASIC3.16□□□□□ -1.9
CNOT4O95628 SNORA68.1-201ENST00000364537 132 ntBASIC3.16□□□□□ -1.9
CNOT4O95628 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CNOT4O95628 RNU6-1310P-201ENST00000384153 107 ntBASIC3.16□□□□□ -1.9
CNOT4O95628 RNU6-748P-201ENST00000384648 107 ntBASIC3.16□□□□□ -1.9
CNOT4O95628 MIR549A-201ENST00000385268 96 ntBASIC3.16□□□□□ -1.9
CNOT4O95628 SNORA40.19-201ENST00000390846 128 ntBASIC3.16□□□□□ -1.9
CNOT4O95628 ELOCP21-201ENST00000412558 336 ntBASIC3.16□□□□□ -1.9
CNOT4O95628 IFNA11P-201ENST00000446352 526 ntBASIC3.16□□□□□ -1.9
CNOT4O95628 RN7SL594P-201ENST00000470590 287 ntBASIC3.16□□□□□ -1.9
CNOT4O95628 RPS29P2-201ENST00000479278 136 ntBASIC3.16□□□□□ -1.9
CNOT4O95628 RNU2-27P-201ENST00000516185 142 ntBASIC3.16□□□□□ -1.9
CNOT4O95628 RN7SKP57-201ENST00000517248 293 ntBASIC3.16□□□□□ -1.9
CNOT4O95628 AC008011.1-201ENST00000545989 227 ntBASIC3.16□□□□□ -1.9
CNOT4O95628 MIR3136-201ENST00000583498 78 ntBASIC3.16□□□□□ -1.9
CNOT4O95628 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.16□□□□□ -1.9
CNOT4O95628 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.16□□□□□ -1.9
CNOT4O95628 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.16□□□□□ -1.9
CNOT4O95628 SNORD98-201ENST00000636377 67 ntBASIC3.16□□□□□ -1.9
CNOT4O95628 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CNOT4O95628 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
CNOT4O95628 AL356274.2-201ENST00000624379 3752 ntBASIC3.16□□□□□ -1.9
CNOT4O95628 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CNOT4O95628 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CNOT4O95628 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CNOT4O95628 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CNOT4O95628 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.15□□□□□ -1.9
CNOT4O95628 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.15□□□□□ -1.9
CNOT4O95628 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CNOT4O95628 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CNOT4O95628 RNU6-1272P-201ENST00000362776 107 ntBASIC3.15□□□□□ -1.91
CNOT4O95628 Y_RNA.571-201ENST00000384753 98 ntBASIC3.15□□□□□ -1.91
CNOT4O95628 MIR208B-201ENST00000401172 77 ntBASIC3.15□□□□□ -1.91
CNOT4O95628 MIR320B2-201ENST00000408479 138 ntBASIC3.15□□□□□ -1.91
CNOT4O95628 RNU2-54P-201ENST00000410299 190 ntBASIC3.15□□□□□ -1.91
CNOT4O95628 RNU5E-9P-201ENST00000411164 104 ntBASIC3.15□□□□□ -1.91
CNOT4O95628 RNU6-1199P-201ENST00000411249 104 ntBASIC3.15□□□□□ -1.91
CNOT4O95628 BMS1P22-201ENST00000414726 313 ntBASIC3.15□□□□□ -1.91
CNOT4O95628 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.15□□□□□ -1.91
CNOT4O95628 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.15□□□□□ -1.91
CNOT4O95628 HMGB3P3-201ENST00000510526 400 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms