Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 RNU6-295P-201ENST00000516901 104 ntBASIC2.24□□□□□ -2.05
CACNA1FO60840 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.24□□□□□ -2.05
CACNA1FO60840 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.24□□□□□ -2.05
CACNA1FO60840 AC015712.3-201ENST00000559380 164 ntBASIC2.24□□□□□ -2.05
CACNA1FO60840 AC005357.1-201ENST00000588399 301 ntBASIC2.24□□□□□ -2.05
CACNA1FO60840 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.24□□□□□ -2.05
CACNA1FO60840 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.23□□□□□ -2.05
CACNA1FO60840 RNU6-1159P-201ENST00000362933 107 ntBASIC2.23□□□□□ -2.05
CACNA1FO60840 Y_RNA.389-201ENST00000383924 113 ntBASIC2.23□□□□□ -2.05
CACNA1FO60840 RNU6-26P-201ENST00000383985 107 ntBASIC2.23□□□□□ -2.05
CACNA1FO60840 MIR521-1-201ENST00000384902 87 ntBASIC2.23□□□□□ -2.05
CACNA1FO60840 AC096644.2-201ENST00000429278 159 ntBASIC2.23□□□□□ -2.05
CACNA1FO60840 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.23□□□□□ -2.05
CACNA1FO60840 FCF1P4-201ENST00000448326 183 ntBASIC2.23□□□□□ -2.05
CACNA1FO60840 RPL22P13-201ENST00000493291 347 ntBASIC2.23□□□□□ -2.05
CACNA1FO60840 RNU2-53P-201ENST00000516257 147 ntBASIC2.23□□□□□ -2.05
CACNA1FO60840 AC144568.1-201ENST00000520139 137 ntBASIC2.23□□□□□ -2.05
CACNA1FO60840 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.23□□□□□ -2.05
CACNA1FO60840 MIR4272-201ENST00000635924 64 ntBASIC2.23□□□□□ -2.05
CACNA1FO60840 AC007785.2-201ENST00000598627 1916 ntBASIC2.23□□□□□ -2.05
CACNA1FO60840 RNU6-784P-201ENST00000384330 106 ntBASIC2.23□□□□□ -2.05
CACNA1FO60840 RNU6-1109P-201ENST00000391187 107 ntBASIC2.23□□□□□ -2.05
CACNA1FO60840 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CACNA1FO60840 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.23□□□□□ -2.05
CACNA1FO60840 SNORA25.11-201ENST00000515935 105 ntBASIC2.23□□□□□ -2.05
CACNA1FO60840 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.23□□□□□ -2.05
CACNA1FO60840 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.23□□□□□ -2.05
CACNA1FO60840 CR383656.8-201ENST00000549046 145 ntBASIC2.23□□□□□ -2.05
CACNA1FO60840 AC124312.5-201ENST00000604451 268 ntBASIC2.23□□□□□ -2.05
CACNA1FO60840 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CACNA1FO60840 MTND5P9-201ENST00000503854 1755 ntBASIC2.22□□□□□ -2.05
CACNA1FO60840 AC010615.1-201ENST00000594254 1764 ntBASIC2.22□□□□□ -2.05
CACNA1FO60840 RNA5SP99-201ENST00000364020 114 ntBASIC2.22□□□□□ -2.05
CACNA1FO60840 RNU2-68P-201ENST00000410878 191 ntBASIC2.22□□□□□ -2.05
CACNA1FO60840 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.22□□□□□ -2.05
CACNA1FO60840 AL117339.3-201ENST00000418733 162 ntBASIC2.22□□□□□ -2.05
CACNA1FO60840 NDUFB4P7-201ENST00000423198 363 ntBASIC2.22□□□□□ -2.05
CACNA1FO60840 AL590383.1-201ENST00000428602 75 ntBASIC2.22□□□□□ -2.05
CACNA1FO60840 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.22□□□□□ -2.05
CACNA1FO60840 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.22□□□□□ -2.05
CACNA1FO60840 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.22□□□□□ -2.05
CACNA1FO60840 PCNPP5-201ENST00000452246 481 ntBASIC2.22□□□□□ -2.05
CACNA1FO60840 snoU13.30-201ENST00000458951 104 ntBASIC2.22□□□□□ -2.05
CACNA1FO60840 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.22□□□□□ -2.05
CACNA1FO60840 CKS1BP2-201ENST00000497342 240 ntBASIC2.22□□□□□ -2.05
CACNA1FO60840 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.22□□□□□ -2.05
CACNA1FO60840 MRPS35P2-201ENST00000508242 191 ntBASIC2.22□□□□□ -2.05
CACNA1FO60840 RNU6-250P-201ENST00000516958 103 ntBASIC2.22□□□□□ -2.05
CACNA1FO60840 RNA5SP165-201ENST00000517142 115 ntBASIC2.22□□□□□ -2.05
CACNA1FO60840 AC131281.1-201ENST00000522984 164 ntBASIC2.22□□□□□ -2.05
CACNA1FO60840 AC023157.2-201ENST00000540596 141 ntBASIC2.22□□□□□ -2.05
CACNA1FO60840 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CACNA1FO60840 MIR3609-201ENST00000582661 80 ntBASIC2.22□□□□□ -2.05
CACNA1FO60840 VN1R91P-201ENST00000594377 169 ntBASIC2.22□□□□□ -2.05
CACNA1FO60840 U4.7-201ENST00000638126 106 ntBASIC2.22□□□□□ -2.05
CACNA1FO60840 Y_RNA.27-201ENST00000362540 103 ntBASIC2.21□□□□□ -2.05
CACNA1FO60840 RNA5SP393-201ENST00000363423 117 ntBASIC2.21□□□□□ -2.05
CACNA1FO60840 RNU6-72P-201ENST00000384285 79 ntBASIC2.21□□□□□ -2.05
CACNA1FO60840 RNU6-472P-201ENST00000384299 107 ntBASIC2.21□□□□□ -2.05
CACNA1FO60840 RNU6-713P-201ENST00000384761 107 ntBASIC2.21□□□□□ -2.05
CACNA1FO60840 FTH1P15-201ENST00000406984 280 ntBASIC2.21□□□□□ -2.05
CACNA1FO60840 RNU2-20P-201ENST00000410425 191 ntBASIC2.21□□□□□ -2.05
CACNA1FO60840 AC114482.1-201ENST00000418010 247 ntBASIC2.21□□□□□ -2.05
CACNA1FO60840 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.21□□□□□ -2.05
CACNA1FO60840 AL133396.1-201ENST00000432048 687 ntBASIC2.21□□□□□ -2.05
CACNA1FO60840 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.21□□□□□ -2.05
CACNA1FO60840 RPS29P20-201ENST00000489592 171 ntBASIC2.21□□□□□ -2.05
CACNA1FO60840 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.21□□□□□ -2.05
CACNA1FO60840 Y_RNA.721-201ENST00000517207 102 ntBASIC2.21□□□□□ -2.05
CACNA1FO60840 AL590705.4-201ENST00000532209 134 ntBASIC2.21□□□□□ -2.05
CACNA1FO60840 AC090897.2-201ENST00000581715 130 ntBASIC2.21□□□□□ -2.05
CACNA1FO60840 AC100812.1-201ENST00000607622 580 ntBASIC2.21□□□□□ -2.05
CACNA1FO60840 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.21□□□□□ -2.05
CACNA1FO60840 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
CACNA1FO60840 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.21□□□□□ -2.06
CACNA1FO60840 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
CACNA1FO60840 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
CACNA1FO60840 Y_RNA.4-201ENST00000362333 112 ntBASIC2.21□□□□□ -2.06
CACNA1FO60840 Y_RNA.48-201ENST00000362710 103 ntBASIC2.21□□□□□ -2.06
CACNA1FO60840 RNU6-105P-201ENST00000363909 104 ntBASIC2.21□□□□□ -2.06
CACNA1FO60840 RNY3P11-201ENST00000364153 102 ntBASIC2.21□□□□□ -2.06
CACNA1FO60840 RNU6-700P-201ENST00000391043 107 ntBASIC2.21□□□□□ -2.06
CACNA1FO60840 RNA5SP494-201ENST00000410653 129 ntBASIC2.21□□□□□ -2.06
CACNA1FO60840 RNU6-847P-201ENST00000411115 108 ntBASIC2.21□□□□□ -2.06
CACNA1FO60840 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.21□□□□□ -2.06
CACNA1FO60840 AL358075.3-201ENST00000426289 226 ntBASIC2.21□□□□□ -2.06
CACNA1FO60840 AC243964.1-201ENST00000441814 261 ntBASIC2.21□□□□□ -2.06
CACNA1FO60840 CHEK2P4-201ENST00000450340 246 ntBASIC2.21□□□□□ -2.06
CACNA1FO60840 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.21□□□□□ -2.06
CACNA1FO60840 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.21□□□□□ -2.06
CACNA1FO60840 HMGB1P35-201ENST00000503360 598 ntBASIC2.21□□□□□ -2.06
CACNA1FO60840 AK3P2-201ENST00000507976 429 ntBASIC2.21□□□□□ -2.06
CACNA1FO60840 RNU6-570P-201ENST00000517051 105 ntBASIC2.21□□□□□ -2.06
CACNA1FO60840 GNAI2P1-201ENST00000541815 315 ntBASIC2.21□□□□□ -2.06
CACNA1FO60840 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.21□□□□□ -2.06
CACNA1FO60840 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.21□□□□□ -2.06
CACNA1FO60840 MIR4503-201ENST00000582187 83 ntBASIC2.21□□□□□ -2.06
CACNA1FO60840 AL356292.1-201ENST00000283110 373 ntBASIC2.2□□□□□ -2.06
CACNA1FO60840 RNU6-527P-201ENST00000363425 104 ntBASIC2.2□□□□□ -2.06
CACNA1FO60840 RNU4-42P-201ENST00000364738 142 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms