Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
LMX1BO60663 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
LMX1BO60663 RNA5SP361-201ENST00000362686 118 ntBASIC2.28□□□□□ -2.04
LMX1BO60663 SNORD21-201ENST00000383953 95 ntBASIC2.28□□□□□ -2.04
LMX1BO60663 RNU6-142P-201ENST00000384019 107 ntBASIC2.28□□□□□ -2.04
LMX1BO60663 RNU6-748P-201ENST00000384648 107 ntBASIC2.28□□□□□ -2.04
LMX1BO60663 MIR592-201ENST00000384959 97 ntBASIC2.28□□□□□ -2.04
LMX1BO60663 AL079342.1-201ENST00000401460 267 ntBASIC2.28□□□□□ -2.04
LMX1BO60663 RNU2-38P-201ENST00000410856 79 ntBASIC2.28□□□□□ -2.04
LMX1BO60663 RNA5SP21-201ENST00000410917 96 ntBASIC2.28□□□□□ -2.04
LMX1BO60663 RNA5SP492-201ENST00000411330 114 ntBASIC2.28□□□□□ -2.04
LMX1BO60663 WARS2P1-201ENST00000429678 537 ntBASIC2.28□□□□□ -2.04
LMX1BO60663 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.28□□□□□ -2.04
LMX1BO60663 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.28□□□□□ -2.04
LMX1BO60663 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.28□□□□□ -2.04
LMX1BO60663 RNU6-1132P-201ENST00000459214 107 ntBASIC2.28□□□□□ -2.04
LMX1BO60663 RPL26P26-201ENST00000480251 434 ntBASIC2.28□□□□□ -2.04
LMX1BO60663 RNU6-1114P-201ENST00000516022 107 ntBASIC2.28□□□□□ -2.04
LMX1BO60663 SNORA40.15-201ENST00000516884 107 ntBASIC2.28□□□□□ -2.04
LMX1BO60663 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.28□□□□□ -2.04
LMX1BO60663 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.28□□□□□ -2.04
LMX1BO60663 AC023824.2-201ENST00000566185 400 ntBASIC2.28□□□□□ -2.04
LMX1BO60663 MIR4300-201ENST00000581016 96 ntBASIC2.28□□□□□ -2.04
LMX1BO60663 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.28□□□□□ -2.04
LMX1BO60663 MIR6817-201ENST00000615588 66 ntBASIC2.28□□□□□ -2.04
LMX1BO60663 AC011476.5-201ENST00000615594 130 ntBASIC2.28□□□□□ -2.04
LMX1BO60663 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
LMX1BO60663 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
LMX1BO60663 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.28□□□□□ -2.05
LMX1BO60663 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.28□□□□□ -2.05
LMX1BO60663 AC091564.4-201ENST00000533934 2194 ntBASIC2.27□□□□□ -2.05
LMX1BO60663 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LMX1BO60663 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LMX1BO60663 AC092268.1-201ENST00000342691 405 ntBASIC2.27□□□□□ -2.05
LMX1BO60663 Y_RNA.84-201ENST00000363011 104 ntBASIC2.27□□□□□ -2.05
LMX1BO60663 RNU6-799P-201ENST00000363567 107 ntBASIC2.27□□□□□ -2.05
LMX1BO60663 Y_RNA.319-201ENST00000365138 92 ntBASIC2.27□□□□□ -2.05
LMX1BO60663 RNU6-19P-201ENST00000384718 107 ntBASIC2.27□□□□□ -2.05
LMX1BO60663 MIR329-1-201ENST00000385028 80 ntBASIC2.27□□□□□ -2.05
LMX1BO60663 MT-TR-201ENST00000387439 65 ntBASIC2.27□□□□□ -2.05
LMX1BO60663 RNU6-1203P-201ENST00000410703 110 ntBASIC2.27□□□□□ -2.05
LMX1BO60663 RPS26P42-201ENST00000413485 326 ntBASIC2.27□□□□□ -2.05
LMX1BO60663 AC012306.1-201ENST00000423267 114 ntBASIC2.27□□□□□ -2.05
LMX1BO60663 AC139712.2-201ENST00000424302 339 ntBASIC2.27□□□□□ -2.05
LMX1BO60663 AIMP1P2-201ENST00000425294 312 ntBASIC2.27□□□□□ -2.05
LMX1BO60663 Z96811.1-201ENST00000445880 108 ntBASIC2.27□□□□□ -2.05
LMX1BO60663 AL031183.1-201ENST00000457667 207 ntBASIC2.27□□□□□ -2.05
LMX1BO60663 UBL5P3-201ENST00000475112 231 ntBASIC2.27□□□□□ -2.05
LMX1BO60663 RNU5F-2P-201ENST00000516066 82 ntBASIC2.27□□□□□ -2.05
LMX1BO60663 RNU6-1143P-201ENST00000516125 104 ntBASIC2.27□□□□□ -2.05
LMX1BO60663 RNU6-570P-201ENST00000517051 105 ntBASIC2.27□□□□□ -2.05
LMX1BO60663 AC021231.3-201ENST00000558497 370 ntBASIC2.27□□□□□ -2.05
LMX1BO60663 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.27□□□□□ -2.05
LMX1BO60663 MIR4659A-201ENST00000580269 81 ntBASIC2.27□□□□□ -2.05
LMX1BO60663 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.27□□□□□ -2.05
LMX1BO60663 RPS15AP11-201ENST00000594193 385 ntBASIC2.27□□□□□ -2.05
LMX1BO60663 RNU6-91P-201ENST00000607774 107 ntBASIC2.27□□□□□ -2.05
LMX1BO60663 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.27□□□□□ -2.05
LMX1BO60663 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.27□□□□□ -2.05
LMX1BO60663 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LMX1BO60663 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LMX1BO60663 OR56A5-201ENST00000340110 738 ntBASIC2.26□□□□□ -2.05
LMX1BO60663 Y_RNA.14-201ENST00000362415 103 ntBASIC2.26□□□□□ -2.05
LMX1BO60663 Y_RNA.143-201ENST00000363520 106 ntBASIC2.26□□□□□ -2.05
LMX1BO60663 RNU6-137P-201ENST00000363680 108 ntBASIC2.26□□□□□ -2.05
LMX1BO60663 SNORA25.6-201ENST00000364121 118 ntBASIC2.26□□□□□ -2.05
LMX1BO60663 Y_RNA.288-201ENST00000364854 92 ntBASIC2.26□□□□□ -2.05
LMX1BO60663 RNU6-1145P-201ENST00000384246 107 ntBASIC2.26□□□□□ -2.05
LMX1BO60663 Y_RNA.476-201ENST00000384347 108 ntBASIC2.26□□□□□ -2.05
LMX1BO60663 RNU6-713P-201ENST00000384761 107 ntBASIC2.26□□□□□ -2.05
LMX1BO60663 MIR1302-6-201ENST00000408466 90 ntBASIC2.26□□□□□ -2.05
LMX1BO60663 RNU2-20P-201ENST00000410425 191 ntBASIC2.26□□□□□ -2.05
LMX1BO60663 RPL19P1-201ENST00000411635 428 ntBASIC2.26□□□□□ -2.05
LMX1BO60663 AC096649.2-201ENST00000416186 393 ntBASIC2.26□□□□□ -2.05
LMX1BO60663 AL590135.1-201ENST00000422215 156 ntBASIC2.26□□□□□ -2.05
LMX1BO60663 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.26□□□□□ -2.05
LMX1BO60663 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.26□□□□□ -2.05
LMX1BO60663 AC019205.3-201ENST00000424573 156 ntBASIC2.26□□□□□ -2.05
LMX1BO60663 AL358075.3-201ENST00000426289 226 ntBASIC2.26□□□□□ -2.05
LMX1BO60663 AL445305.1-201ENST00000432577 575 ntBASIC2.26□□□□□ -2.05
LMX1BO60663 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.26□□□□□ -2.05
LMX1BO60663 snoU13.14-201ENST00000459372 104 ntBASIC2.26□□□□□ -2.05
LMX1BO60663 RPS29P12-201ENST00000460178 152 ntBASIC2.26□□□□□ -2.05
LMX1BO60663 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.26□□□□□ -2.05
LMX1BO60663 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.26□□□□□ -2.05
LMX1BO60663 RNA5SP148-201ENST00000516527 94 ntBASIC2.26□□□□□ -2.05
LMX1BO60663 RNU6-388P-201ENST00000517012 105 ntBASIC2.26□□□□□ -2.05
LMX1BO60663 RNU6-389P-201ENST00000517048 105 ntBASIC2.26□□□□□ -2.05
LMX1BO60663 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.26□□□□□ -2.05
LMX1BO60663 AC025281.1-201ENST00000567026 265 ntBASIC2.26□□□□□ -2.05
LMX1BO60663 SNORD53-201ENST00000579969 78 ntBASIC2.26□□□□□ -2.05
LMX1BO60663 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.26□□□□□ -2.05
LMX1BO60663 AC012433.1-201ENST00000588916 398 ntBASIC2.26□□□□□ -2.05
LMX1BO60663 AL356575.1-201ENST00000603008 283 ntBASIC2.26□□□□□ -2.05
LMX1BO60663 AC073410.2-201ENST00000603240 332 ntBASIC2.26□□□□□ -2.05
LMX1BO60663 AC096772.1-201ENST00000609146 564 ntBASIC2.26□□□□□ -2.05
LMX1BO60663 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.26□□□□□ -2.05
LMX1BO60663 AC064859.1-201ENST00000624741 174 ntBASIC2.26□□□□□ -2.05
LMX1BO60663 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.26□□□□□ -2.05
LMX1BO60663 AC002543.1-201ENST00000299783 1954 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms