Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 RNU1-76P-201ENST00000362903 159 ntBASIC1.5□□□□□ -2.17
TRAF3IP2O43734 SNORD50.1-201ENST00000362987 71 ntBASIC1.5□□□□□ -2.17
TRAF3IP2O43734 Y_RNA.99-201ENST00000363138 105 ntBASIC1.5□□□□□ -2.17
TRAF3IP2O43734 RNU6-378P-201ENST00000384324 107 ntBASIC1.5□□□□□ -2.17
TRAF3IP2O43734 SNORA12-201ENST00000391162 147 ntBASIC1.5□□□□□ -2.17
TRAF3IP2O43734 HMGN2P39-201ENST00000398005 273 ntBASIC1.5□□□□□ -2.17
TRAF3IP2O43734 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
TRAF3IP2O43734 MIR208B-201ENST00000401172 77 ntBASIC1.5□□□□□ -2.17
TRAF3IP2O43734 AL357139.1-201ENST00000407792 426 ntBASIC1.5□□□□□ -2.17
TRAF3IP2O43734 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAF3IP2O43734 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAF3IP2O43734 OR2AQ1P-201ENST00000451972 200 ntBASIC1.5□□□□□ -2.17
TRAF3IP2O43734 RPL23AP3-201ENST00000453844 468 ntBASIC1.5□□□□□ -2.17
TRAF3IP2O43734 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAF3IP2O43734 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.5□□□□□ -2.17
TRAF3IP2O43734 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAF3IP2O43734 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAF3IP2O43734 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAF3IP2O43734 AC026470.2-201ENST00000561492 181 ntBASIC1.5□□□□□ -2.17
TRAF3IP2O43734 AL031274.2-201ENST00000599419 203 ntBASIC1.5□□□□□ -2.17
TRAF3IP2O43734 AC019193.3-201ENST00000609144 554 ntBASIC1.5□□□□□ -2.17
TRAF3IP2O43734 MIR8081-201ENST00000611533 95 ntBASIC1.5□□□□□ -2.17
TRAF3IP2O43734 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.5□□□□□ -2.17
TRAF3IP2O43734 MIR1248-201ENST00000629190 106 ntBASIC1.5□□□□□ -2.17
TRAF3IP2O43734 AC233981.2-201ENST00000611524 1614 ntBASIC1.5□□□□□ -2.17
TRAF3IP2O43734 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.5□□□□□ -2.17
TRAF3IP2O43734 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
TRAF3IP2O43734 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.49□□□□□ -2.17
TRAF3IP2O43734 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
TRAF3IP2O43734 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
TRAF3IP2O43734 SNORD115-32-201ENST00000364079 82 ntBASIC1.49□□□□□ -2.17
TRAF3IP2O43734 Y_RNA.338-201ENST00000365320 114 ntBASIC1.49□□□□□ -2.17
TRAF3IP2O43734 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
TRAF3IP2O43734 RNU6-767P-201ENST00000384132 107 ntBASIC1.49□□□□□ -2.17
TRAF3IP2O43734 SNORD14D-201ENST00000384390 87 ntBASIC1.49□□□□□ -2.17
TRAF3IP2O43734 AL627390.1-201ENST00000396055 340 ntBASIC1.49□□□□□ -2.17
TRAF3IP2O43734 MIR548K-201ENST00000408406 116 ntBASIC1.49□□□□□ -2.17
TRAF3IP2O43734 RNA5SP494-201ENST00000410653 129 ntBASIC1.49□□□□□ -2.17
TRAF3IP2O43734 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.49□□□□□ -2.17
TRAF3IP2O43734 AL353689.1-201ENST00000438895 199 ntBASIC1.49□□□□□ -2.17
TRAF3IP2O43734 AF186996.7-201ENST00000492781 209 ntBASIC1.49□□□□□ -2.17
TRAF3IP2O43734 MTND5P5-201ENST00000503764 376 ntBASIC1.49□□□□□ -2.17
TRAF3IP2O43734 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.49□□□□□ -2.17
TRAF3IP2O43734 PRDX4P1-201ENST00000507189 574 ntBASIC1.49□□□□□ -2.17
TRAF3IP2O43734 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.49□□□□□ -2.17
TRAF3IP2O43734 RNU6-965P-201ENST00000516721 96 ntBASIC1.49□□□□□ -2.17
TRAF3IP2O43734 RNU1-54P-201ENST00000517181 120 ntBASIC1.49□□□□□ -2.17
TRAF3IP2O43734 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.49□□□□□ -2.17
TRAF3IP2O43734 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.49□□□□□ -2.17
TRAF3IP2O43734 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.49□□□□□ -2.17
TRAF3IP2O43734 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.49□□□□□ -2.17
TRAF3IP2O43734 MIR4790-201ENST00000577799 79 ntBASIC1.49□□□□□ -2.17
TRAF3IP2O43734 MIR4299-201ENST00000577899 72 ntBASIC1.49□□□□□ -2.17
TRAF3IP2O43734 MIR4529-201ENST00000578110 78 ntBASIC1.49□□□□□ -2.17
TRAF3IP2O43734 AC005296.1-201ENST00000616145 209 ntBASIC1.49□□□□□ -2.17
TRAF3IP2O43734 AL359314.1-201ENST00000616913 261 ntBASIC1.49□□□□□ -2.17
TRAF3IP2O43734 MTND5P9-201ENST00000503854 1755 ntBASIC1.49□□□□□ -2.17
TRAF3IP2O43734 CBX3P1-201ENST00000325243 554 ntBASIC1.48□□□□□ -2.17
TRAF3IP2O43734 Y_RNA.160-201ENST00000363677 92 ntBASIC1.48□□□□□ -2.17
TRAF3IP2O43734 RNU4-9P-201ENST00000364951 139 ntBASIC1.48□□□□□ -2.17
TRAF3IP2O43734 MT-TL1-201ENST00000386347 75 ntBASIC1.48□□□□□ -2.17
TRAF3IP2O43734 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.48□□□□□ -2.17
TRAF3IP2O43734 RNU6-174P-201ENST00000410406 106 ntBASIC1.48□□□□□ -2.17
TRAF3IP2O43734 RPL21P111-201ENST00000418453 477 ntBASIC1.48□□□□□ -2.17
TRAF3IP2O43734 NCOR1P3-201ENST00000420479 303 ntBASIC1.48□□□□□ -2.17
TRAF3IP2O43734 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.48□□□□□ -2.17
TRAF3IP2O43734 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.48□□□□□ -2.17
TRAF3IP2O43734 PPP1R2P5-201ENST00000457256 603 ntBASIC1.48□□□□□ -2.17
TRAF3IP2O43734 SNORD5.1-201ENST00000458800 75 ntBASIC1.48□□□□□ -2.17
TRAF3IP2O43734 AC007215.1-201ENST00000464893 276 ntBASIC1.48□□□□□ -2.17
TRAF3IP2O43734 AC107032.1-201ENST00000485945 480 ntBASIC1.48□□□□□ -2.17
TRAF3IP2O43734 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.48□□□□□ -2.17
TRAF3IP2O43734 RPL23AP75-201ENST00000491601 451 ntBASIC1.48□□□□□ -2.17
TRAF3IP2O43734 RNU6-273P-201ENST00000516937 96 ntBASIC1.48□□□□□ -2.17
TRAF3IP2O43734 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.48□□□□□ -2.17
TRAF3IP2O43734 MRPS36P4-201ENST00000534436 298 ntBASIC1.48□□□□□ -2.17
TRAF3IP2O43734 CBX3P4-201ENST00000538909 354 ntBASIC1.48□□□□□ -2.17
TRAF3IP2O43734 AC109446.1-201ENST00000566172 220 ntBASIC1.48□□□□□ -2.17
TRAF3IP2O43734 MIR4498-201ENST00000577599 66 ntBASIC1.48□□□□□ -2.17
TRAF3IP2O43734 MIR5696-201ENST00000578474 85 ntBASIC1.48□□□□□ -2.17
TRAF3IP2O43734 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.48□□□□□ -2.17
TRAF3IP2O43734 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.48□□□□□ -2.17
TRAF3IP2O43734 AC099654.14-201ENST00000638599 341 ntBASIC1.48□□□□□ -2.17
TRAF3IP2O43734 AC008555.8-201ENST00000623602 2168 ntBASIC1.47□□□□□ -2.17
TRAF3IP2O43734 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
TRAF3IP2O43734 RNU6-845P-201ENST00000362578 103 ntBASIC1.47□□□□□ -2.17
TRAF3IP2O43734 SNORD115-8-201ENST00000363856 82 ntBASIC1.47□□□□□ -2.17
TRAF3IP2O43734 SNORD115-38-201ENST00000365037 82 ntBASIC1.47□□□□□ -2.17
TRAF3IP2O43734 Y_RNA.332-201ENST00000365271 113 ntBASIC1.47□□□□□ -2.17
TRAF3IP2O43734 RNU6-1283P-201ENST00000365314 105 ntBASIC1.47□□□□□ -2.17
TRAF3IP2O43734 Y_RNA.490-201ENST00000384413 102 ntBASIC1.47□□□□□ -2.17
TRAF3IP2O43734 MIR518A2-201ENST00000384966 87 ntBASIC1.47□□□□□ -2.17
TRAF3IP2O43734 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
TRAF3IP2O43734 RNA5SP465-201ENST00000391195 109 ntBASIC1.47□□□□□ -2.17
TRAF3IP2O43734 MIR1262-201ENST00000408276 93 ntBASIC1.47□□□□□ -2.17
TRAF3IP2O43734 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.47□□□□□ -2.17
TRAF3IP2O43734 snoU13.6-201ENST00000458785 104 ntBASIC1.47□□□□□ -2.17
TRAF3IP2O43734 AC087477.1-201ENST00000465747 340 ntBASIC1.47□□□□□ -2.17
TRAF3IP2O43734 AC093259.1-201ENST00000509755 300 ntBASIC1.47□□□□□ -2.17
TRAF3IP2O43734 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms