Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 RNA5SP54-201ENST00000516951 92 ntBASIC2.88□□□□□ -1.95
PROM1O43490 RN7SKP40-201ENST00000517211 242 ntBASIC2.88□□□□□ -1.95
PROM1O43490 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.88□□□□□ -1.95
PROM1O43490 AC103810.1-201ENST00000579873 453 ntBASIC2.88□□□□□ -1.95
PROM1O43490 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.88□□□□□ -1.95
PROM1O43490 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.88□□□□□ -1.95
PROM1O43490 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PROM1O43490 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
PROM1O43490 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
PROM1O43490 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
PROM1O43490 MIR22-201ENST00000362190 85 ntBASIC2.87□□□□□ -1.95
PROM1O43490 SNORD114-19-201ENST00000363072 75 ntBASIC2.87□□□□□ -1.95
PROM1O43490 Y_RNA.352-201ENST00000365439 102 ntBASIC2.87□□□□□ -1.95
PROM1O43490 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
PROM1O43490 RNU6-338P-201ENST00000383888 105 ntBASIC2.87□□□□□ -1.95
PROM1O43490 SNORA54-201ENST00000384281 123 ntBASIC2.87□□□□□ -1.95
PROM1O43490 SNORA44-201ENST00000384584 132 ntBASIC2.87□□□□□ -1.95
PROM1O43490 RNU6-750P-201ENST00000390946 107 ntBASIC2.87□□□□□ -1.95
PROM1O43490 AL603910.2-201ENST00000407268 136 ntBASIC2.87□□□□□ -1.95
PROM1O43490 AC096649.2-201ENST00000416186 393 ntBASIC2.87□□□□□ -1.95
PROM1O43490 AC092427.1-202ENST00000430569 476 ntBASIC2.87□□□□□ -1.95
PROM1O43490 MRPS36P2-201ENST00000512569 299 ntBASIC2.87□□□□□ -1.95
PROM1O43490 RNU6-496P-201ENST00000516145 99 ntBASIC2.87□□□□□ -1.95
PROM1O43490 AC107016.2-201ENST00000547968 190 ntBASIC2.87□□□□□ -1.95
PROM1O43490 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.87□□□□□ -1.95
PROM1O43490 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.87□□□□□ -1.95
PROM1O43490 MIR3136-201ENST00000583498 78 ntBASIC2.87□□□□□ -1.95
PROM1O43490 AC006023.1-201ENST00000603944 259 ntBASIC2.87□□□□□ -1.95
PROM1O43490 AL033523.1-201ENST00000605153 153 ntBASIC2.87□□□□□ -1.95
PROM1O43490 AC010999.1-201ENST00000611856 324 ntBASIC2.87□□□□□ -1.95
PROM1O43490 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.87□□□□□ -1.95
PROM1O43490 AL137790.1-201ENST00000634283 177 ntBASIC2.87□□□□□ -1.95
PROM1O43490 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.87□□□□□ -1.95
PROM1O43490 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
PROM1O43490 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
PROM1O43490 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
PROM1O43490 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PROM1O43490 AC073325.2-201ENST00000339545 159 ntBASIC2.86□□□□□ -1.95
PROM1O43490 Y_RNA.20-201ENST00000362479 113 ntBASIC2.86□□□□□ -1.95
PROM1O43490 RNU4-90P-201ENST00000362773 141 ntBASIC2.86□□□□□ -1.95
PROM1O43490 RNU6-1266P-201ENST00000362794 105 ntBASIC2.86□□□□□ -1.95
PROM1O43490 SNORD115-8-201ENST00000363856 82 ntBASIC2.86□□□□□ -1.95
PROM1O43490 Y_RNA.277-201ENST00000364754 102 ntBASIC2.86□□□□□ -1.95
PROM1O43490 SNORD115-38-201ENST00000365037 82 ntBASIC2.86□□□□□ -1.95
PROM1O43490 MIR329-1-201ENST00000385028 80 ntBASIC2.86□□□□□ -1.95
PROM1O43490 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
PROM1O43490 AL033519.2-201ENST00000403958 392 ntBASIC2.86□□□□□ -1.95
PROM1O43490 Y_RNA.595-201ENST00000410403 105 ntBASIC2.86□□□□□ -1.95
PROM1O43490 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.86□□□□□ -1.95
PROM1O43490 MTND5P15-201ENST00000434246 349 ntBASIC2.86□□□□□ -1.95
PROM1O43490 AC112220.1-201ENST00000434628 355 ntBASIC2.86□□□□□ -1.95
PROM1O43490 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.86□□□□□ -1.95
PROM1O43490 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.86□□□□□ -1.95
PROM1O43490 AP001324.2-201ENST00000461163 319 ntBASIC2.86□□□□□ -1.95
PROM1O43490 AC008885.1-201ENST00000514930 301 ntBASIC2.86□□□□□ -1.95
PROM1O43490 SNORA40.9-201ENST00000515895 93 ntBASIC2.86□□□□□ -1.95
PROM1O43490 RNU5F-2P-201ENST00000516066 82 ntBASIC2.86□□□□□ -1.95
PROM1O43490 SCARNA11.3-201ENST00000517276 130 ntBASIC2.86□□□□□ -1.95
PROM1O43490 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.86□□□□□ -1.95
PROM1O43490 CYP4A27P-201ENST00000567218 190 ntBASIC2.86□□□□□ -1.95
PROM1O43490 MIR4672-201ENST00000583126 81 ntBASIC2.86□□□□□ -1.95
PROM1O43490 MIR3616-201ENST00000584070 92 ntBASIC2.86□□□□□ -1.95
PROM1O43490 RPL12P50-201ENST00000603116 116 ntBASIC2.86□□□□□ -1.95
PROM1O43490 AL034555.1-201ENST00000604816 211 ntBASIC2.86□□□□□ -1.95
PROM1O43490 AC093732.2-201ENST00000607950 274 ntBASIC2.86□□□□□ -1.95
PROM1O43490 AC007318.2-201ENST00000620999 243 ntBASIC2.86□□□□□ -1.95
PROM1O43490 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PROM1O43490 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
PROM1O43490 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.86□□□□□ -1.95
PROM1O43490 AC108206.1-201ENST00000570186 4159 ntBASIC2.85□□□□□ -1.95
PROM1O43490 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PROM1O43490 RNU6-626P-201ENST00000363354 107 ntBASIC2.85□□□□□ -1.95
PROM1O43490 RNU6-529P-201ENST00000363383 104 ntBASIC2.85□□□□□ -1.95
PROM1O43490 RNU5F-3P-201ENST00000363767 117 ntBASIC2.85□□□□□ -1.95
PROM1O43490 RNA5SP126-201ENST00000365092 109 ntBASIC2.85□□□□□ -1.95
PROM1O43490 RNU6-290P-201ENST00000365212 101 ntBASIC2.85□□□□□ -1.95
PROM1O43490 U8.9-201ENST00000365667 134 ntBASIC2.85□□□□□ -1.95
PROM1O43490 RNU6-20P-201ENST00000384106 107 ntBASIC2.85□□□□□ -1.95
PROM1O43490 RNU6-1145P-201ENST00000384246 107 ntBASIC2.85□□□□□ -1.95
PROM1O43490 SNORD63-201ENST00000384262 68 ntBASIC2.85□□□□□ -1.95
PROM1O43490 Y_RNA.462-201ENST00000384268 102 ntBASIC2.85□□□□□ -1.95
PROM1O43490 RNU5A-5P-201ENST00000411054 116 ntBASIC2.85□□□□□ -1.95
PROM1O43490 RPS26P42-201ENST00000413485 326 ntBASIC2.85□□□□□ -1.95
PROM1O43490 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.85□□□□□ -1.95
PROM1O43490 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.85□□□□□ -1.95
PROM1O43490 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.85□□□□□ -1.95
PROM1O43490 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.85□□□□□ -1.95
PROM1O43490 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.85□□□□□ -1.95
PROM1O43490 AC073901.1-201ENST00000462471 408 ntBASIC2.85□□□□□ -1.95
PROM1O43490 AC112771.1-201ENST00000463581 102 ntBASIC2.85□□□□□ -1.95
PROM1O43490 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.85□□□□□ -1.95
PROM1O43490 SEPT14P8-201ENST00000508026 178 ntBASIC2.85□□□□□ -1.95
PROM1O43490 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.85□□□□□ -1.95
PROM1O43490 MIR3923-201ENST00000579521 83 ntBASIC2.85□□□□□ -1.95
PROM1O43490 SNORD113-5-201ENST00000607261 78 ntBASIC2.85□□□□□ -1.95
PROM1O43490 RNU6-91P-201ENST00000607774 107 ntBASIC2.85□□□□□ -1.95
PROM1O43490 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.85□□□□□ -1.95
PROM1O43490 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.85□□□□□ -1.95
PROM1O43490 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.85□□□□□ -1.95
PROM1O43490 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms