Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.74□□□□□ -1.97
PHGDHO43175 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.74□□□□□ -1.97
PHGDHO43175 MTND5P22-201ENST00000458380 195 ntBASIC2.74□□□□□ -1.97
PHGDHO43175 RNU7-14P-201ENST00000459331 62 ntBASIC2.74□□□□□ -1.97
PHGDHO43175 AC091179.3-201ENST00000474761 144 ntBASIC2.74□□□□□ -1.97
PHGDHO43175 SCARNA13-201ENST00000516672 275 ntBASIC2.74□□□□□ -1.97
PHGDHO43175 AL390123.1-201ENST00000603216 237 ntBASIC2.74□□□□□ -1.97
PHGDHO43175 MZT1P2-201ENST00000604387 248 ntBASIC2.74□□□□□ -1.97
PHGDHO43175 AL162274.2-201ENST00000614406 332 ntBASIC2.74□□□□□ -1.97
PHGDHO43175 U6.92-201ENST00000636464 89 ntBASIC2.74□□□□□ -1.97
PHGDHO43175 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.74□□□□□ -1.97
PHGDHO43175 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
PHGDHO43175 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.74□□□□□ -1.97
PHGDHO43175 MTND5P35-201ENST00000557537 1720 ntBASIC2.73□□□□□ -1.97
PHGDHO43175 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.73□□□□□ -1.97
PHGDHO43175 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.73□□□□□ -1.97
PHGDHO43175 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
PHGDHO43175 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.73□□□□□ -1.97
PHGDHO43175 RNU4-50P-201ENST00000364361 141 ntBASIC2.73□□□□□ -1.97
PHGDHO43175 RNU6-1026P-201ENST00000384465 108 ntBASIC2.73□□□□□ -1.97
PHGDHO43175 RNU6-1105P-201ENST00000384774 107 ntBASIC2.73□□□□□ -1.97
PHGDHO43175 Y_RNA.595-201ENST00000410403 105 ntBASIC2.73□□□□□ -1.97
PHGDHO43175 SNORD12B-201ENST00000410433 91 ntBASIC2.73□□□□□ -1.97
PHGDHO43175 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.73□□□□□ -1.97
PHGDHO43175 ARL5AP4-201ENST00000430731 512 ntBASIC2.73□□□□□ -1.97
PHGDHO43175 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.73□□□□□ -1.97
PHGDHO43175 RNU6-344P-201ENST00000516635 111 ntBASIC2.73□□□□□ -1.97
PHGDHO43175 RPPH1-2P-201ENST00000516688 293 ntBASIC2.73□□□□□ -1.97
PHGDHO43175 RNU1-117P-201ENST00000517041 158 ntBASIC2.73□□□□□ -1.97
PHGDHO43175 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.73□□□□□ -1.97
PHGDHO43175 SNORD11B-201ENST00000607707 90 ntBASIC2.73□□□□□ -1.97
PHGDHO43175 U4atac.1-201ENST00000618345 95 ntBASIC2.73□□□□□ -1.97
PHGDHO43175 MIR1248-201ENST00000629190 106 ntBASIC2.73□□□□□ -1.97
PHGDHO43175 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PHGDHO43175 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
PHGDHO43175 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.72□□□□□ -1.97
PHGDHO43175 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PHGDHO43175 RNU6-1309P-201ENST00000363305 108 ntBASIC2.72□□□□□ -1.97
PHGDHO43175 RNU6-926P-201ENST00000384075 107 ntBASIC2.72□□□□□ -1.97
PHGDHO43175 EEF1A1P41-201ENST00000414667 207 ntBASIC2.72□□□□□ -1.97
PHGDHO43175 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.72□□□□□ -1.97
PHGDHO43175 AL358176.2-201ENST00000425769 204 ntBASIC2.72□□□□□ -1.97
PHGDHO43175 SDAD1P3-201ENST00000427380 333 ntBASIC2.72□□□□□ -1.97
PHGDHO43175 AL139132.1-201ENST00000431587 344 ntBASIC2.72□□□□□ -1.97
PHGDHO43175 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.72□□□□□ -1.97
PHGDHO43175 AC009238.1-201ENST00000442165 424 ntBASIC2.72□□□□□ -1.97
PHGDHO43175 IFNA11P-201ENST00000446352 526 ntBASIC2.72□□□□□ -1.97
PHGDHO43175 AC009237.6-201ENST00000446969 424 ntBASIC2.72□□□□□ -1.97
PHGDHO43175 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.72□□□□□ -1.97
PHGDHO43175 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.72□□□□□ -1.97
PHGDHO43175 AC010469.2-201ENST00000496412 480 ntBASIC2.72□□□□□ -1.97
PHGDHO43175 AC004486.1-201ENST00000546846 233 ntBASIC2.72□□□□□ -1.97
PHGDHO43175 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.72□□□□□ -1.97
PHGDHO43175 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.72□□□□□ -1.97
PHGDHO43175 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.72□□□□□ -1.97
PHGDHO43175 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
PHGDHO43175 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.71□□□□□ -1.98
PHGDHO43175 Y_RNA.133-201ENST00000363428 110 ntBASIC2.71□□□□□ -1.98
PHGDHO43175 RNU6-1145P-201ENST00000384246 107 ntBASIC2.71□□□□□ -1.98
PHGDHO43175 Y_RNA.471-201ENST00000384312 102 ntBASIC2.71□□□□□ -1.98
PHGDHO43175 RNU6-1072P-201ENST00000384703 107 ntBASIC2.71□□□□□ -1.98
PHGDHO43175 RNU6-443P-201ENST00000384780 107 ntBASIC2.71□□□□□ -1.98
PHGDHO43175 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
PHGDHO43175 AL357139.1-201ENST00000407792 426 ntBASIC2.71□□□□□ -1.98
PHGDHO43175 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.71□□□□□ -1.98
PHGDHO43175 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.71□□□□□ -1.98
PHGDHO43175 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.71□□□□□ -1.98
PHGDHO43175 UQCRBP2-201ENST00000447827 297 ntBASIC2.71□□□□□ -1.98
PHGDHO43175 FCF1P4-201ENST00000448326 183 ntBASIC2.71□□□□□ -1.98
PHGDHO43175 AC007395.1-201ENST00000451333 677 ntBASIC2.71□□□□□ -1.98
PHGDHO43175 AC018868.1-201ENST00000491307 315 ntBASIC2.71□□□□□ -1.98
PHGDHO43175 Y_RNA.715-201ENST00000517082 110 ntBASIC2.71□□□□□ -1.98
PHGDHO43175 RNU6-667P-201ENST00000517186 102 ntBASIC2.71□□□□□ -1.98
PHGDHO43175 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.71□□□□□ -1.98
PHGDHO43175 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PHGDHO43175 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.71□□□□□ -1.98
PHGDHO43175 AC135776.4-201ENST00000624300 1904 ntBASIC2.71□□□□□ -1.98
PHGDHO43175 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PHGDHO43175 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PHGDHO43175 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
PHGDHO43175 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PHGDHO43175 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
PHGDHO43175 SNORA38-201ENST00000363946 132 ntBASIC2.7□□□□□ -1.98
PHGDHO43175 SNORA25B-201ENST00000365507 128 ntBASIC2.7□□□□□ -1.98
PHGDHO43175 SNORA63.7-201ENST00000365579 123 ntBASIC2.7□□□□□ -1.98
PHGDHO43175 MIR568-201ENST00000385036 95 ntBASIC2.7□□□□□ -1.98
PHGDHO43175 MIR548F4-201ENST00000408515 105 ntBASIC2.7□□□□□ -1.98
PHGDHO43175 MIR1252-201ENST00000408861 65 ntBASIC2.7□□□□□ -1.98
PHGDHO43175 RNA5SP492-201ENST00000411330 114 ntBASIC2.7□□□□□ -1.98
PHGDHO43175 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.7□□□□□ -1.98
PHGDHO43175 DPH3P2-201ENST00000422618 250 ntBASIC2.7□□□□□ -1.98
PHGDHO43175 MTND3P2-201ENST00000438452 342 ntBASIC2.7□□□□□ -1.98
PHGDHO43175 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.7□□□□□ -1.98
PHGDHO43175 PCNPP5-201ENST00000452246 481 ntBASIC2.7□□□□□ -1.98
PHGDHO43175 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.7□□□□□ -1.98
PHGDHO43175 AC010655.3-201ENST00000478818 450 ntBASIC2.7□□□□□ -1.98
PHGDHO43175 ATP5EP1-201ENST00000510257 156 ntBASIC2.7□□□□□ -1.98
PHGDHO43175 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.7□□□□□ -1.98
PHGDHO43175 RNU6-1012P-201ENST00000516606 109 ntBASIC2.7□□□□□ -1.98
PHGDHO43175 RNA5SP490-201ENST00000517141 136 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms