Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 RNU2-31P-201ENST00000516954 155 ntBASIC3.2□□□□□ -1.9
FOXN1O15353 SNORA31.19-201ENST00000517079 126 ntBASIC3.2□□□□□ -1.9
FOXN1O15353 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.2□□□□□ -1.9
FOXN1O15353 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.2□□□□□ -1.9
FOXN1O15353 AL162424.1-201ENST00000602325 221 ntBASIC3.2□□□□□ -1.9
FOXN1O15353 AL078605.1-201ENST00000603529 500 ntBASIC3.2□□□□□ -1.9
FOXN1O15353 AL645944.1-201ENST00000603857 493 ntBASIC3.2□□□□□ -1.9
FOXN1O15353 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.2□□□□□ -1.9
FOXN1O15353 U4.7-201ENST00000638126 106 ntBASIC3.2□□□□□ -1.9
FOXN1O15353 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
FOXN1O15353 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
FOXN1O15353 AC092435.3-201ENST00000565538 3654 ntBASIC3.19□□□□□ -1.9
FOXN1O15353 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
FOXN1O15353 Y_RNA.8-201ENST00000362353 102 ntBASIC3.19□□□□□ -1.9
FOXN1O15353 RNU4-9P-201ENST00000364951 139 ntBASIC3.19□□□□□ -1.9
FOXN1O15353 RNU5E-7P-201ENST00000365290 117 ntBASIC3.19□□□□□ -1.9
FOXN1O15353 RNU6-326P-201ENST00000365480 107 ntBASIC3.19□□□□□ -1.9
FOXN1O15353 RNU6-318P-201ENST00000384283 103 ntBASIC3.19□□□□□ -1.9
FOXN1O15353 SNORA53-201ENST00000391141 249 ntBASIC3.19□□□□□ -1.9
FOXN1O15353 RNA5SP129-201ENST00000410276 118 ntBASIC3.19□□□□□ -1.9
FOXN1O15353 RPL27AP8-201ENST00000424277 446 ntBASIC3.19□□□□□ -1.9
FOXN1O15353 AC005002.2-201ENST00000438228 269 ntBASIC3.19□□□□□ -1.9
FOXN1O15353 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.19□□□□□ -1.9
FOXN1O15353 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.19□□□□□ -1.9
FOXN1O15353 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.19□□□□□ -1.9
FOXN1O15353 AL160314.1-201ENST00000490836 438 ntBASIC3.19□□□□□ -1.9
FOXN1O15353 SNORA70.16-201ENST00000516390 95 ntBASIC3.19□□□□□ -1.9
FOXN1O15353 SNORA31.18-201ENST00000517043 134 ntBASIC3.19□□□□□ -1.9
FOXN1O15353 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.19□□□□□ -1.9
FOXN1O15353 AL110115.1-201ENST00000614396 364 ntBASIC3.19□□□□□ -1.9
FOXN1O15353 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
FOXN1O15353 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
FOXN1O15353 AC233981.2-201ENST00000611524 1614 ntBASIC3.19□□□□□ -1.9
FOXN1O15353 AL161431.1-201ENST00000618966 4205 ntBASIC3.18□□□□□ -1.9
FOXN1O15353 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
FOXN1O15353 RNU6-50P-201ENST00000362356 103 ntBASIC3.18□□□□□ -1.9
FOXN1O15353 Y_RNA.383-201ENST00000383855 97 ntBASIC3.18□□□□□ -1.9
FOXN1O15353 BTF3L4P2-201ENST00000392798 346 ntBASIC3.18□□□□□ -1.9
FOXN1O15353 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.18□□□□□ -1.9
FOXN1O15353 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.18□□□□□ -1.9
FOXN1O15353 AC009296.1-201ENST00000443146 155 ntBASIC3.18□□□□□ -1.9
FOXN1O15353 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.18□□□□□ -1.9
FOXN1O15353 AC092798.1-201ENST00000458542 409 ntBASIC3.18□□□□□ -1.9
FOXN1O15353 AC103975.1-201ENST00000482506 483 ntBASIC3.18□□□□□ -1.9
FOXN1O15353 RPL23AP75-201ENST00000491601 451 ntBASIC3.18□□□□□ -1.9
FOXN1O15353 AC010265.1-201ENST00000513509 211 ntBASIC3.18□□□□□ -1.9
FOXN1O15353 SCARNA15.2-201ENST00000516409 127 ntBASIC3.18□□□□□ -1.9
FOXN1O15353 RNU6-1256P-201ENST00000516539 103 ntBASIC3.18□□□□□ -1.9
FOXN1O15353 RNU6-572P-201ENST00000516724 80 ntBASIC3.18□□□□□ -1.9
FOXN1O15353 RNA5SP290-201ENST00000517133 127 ntBASIC3.18□□□□□ -1.9
FOXN1O15353 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.18□□□□□ -1.9
FOXN1O15353 SNORD113-5-201ENST00000607261 78 ntBASIC3.18□□□□□ -1.9
FOXN1O15353 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.18□□□□□ -1.9
FOXN1O15353 AC104465.1-201ENST00000611365 139 ntBASIC3.18□□□□□ -1.9
FOXN1O15353 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.18□□□□□ -1.9
FOXN1O15353 MIR6733-201ENST00000635723 61 ntBASIC3.18□□□□□ -1.9
FOXN1O15353 U6.106-201ENST00000636360 105 ntBASIC3.18□□□□□ -1.9
FOXN1O15353 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.18□□□□□ -1.9
FOXN1O15353 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
FOXN1O15353 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
FOXN1O15353 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
FOXN1O15353 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
FOXN1O15353 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
FOXN1O15353 RNU6-879P-201ENST00000364328 108 ntBASIC3.17□□□□□ -1.9
FOXN1O15353 RNU6-17P-201ENST00000384245 107 ntBASIC3.17□□□□□ -1.9
FOXN1O15353 RNU6-843P-201ENST00000384454 104 ntBASIC3.17□□□□□ -1.9
FOXN1O15353 RNU6-18P-201ENST00000384527 107 ntBASIC3.17□□□□□ -1.9
FOXN1O15353 RNU6-1081P-201ENST00000384537 107 ntBASIC3.17□□□□□ -1.9
FOXN1O15353 Y_RNA.569-201ENST00000384749 103 ntBASIC3.17□□□□□ -1.9
FOXN1O15353 RNU6-918P-201ENST00000391219 106 ntBASIC3.17□□□□□ -1.9
FOXN1O15353 MIR1290-201ENST00000408735 78 ntBASIC3.17□□□□□ -1.9
FOXN1O15353 Y_RNA.590-201ENST00000410140 107 ntBASIC3.17□□□□□ -1.9
FOXN1O15353 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.17□□□□□ -1.9
FOXN1O15353 NDUFB4P7-201ENST00000423198 363 ntBASIC3.17□□□□□ -1.9
FOXN1O15353 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.17□□□□□ -1.9
FOXN1O15353 AC007919.1-201ENST00000429380 217 ntBASIC3.17□□□□□ -1.9
FOXN1O15353 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.17□□□□□ -1.9
FOXN1O15353 MRPS18CP4-201ENST00000535821 231 ntBASIC3.17□□□□□ -1.9
FOXN1O15353 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.17□□□□□ -1.9
FOXN1O15353 MIR3144-201ENST00000579460 79 ntBASIC3.17□□□□□ -1.9
FOXN1O15353 MIR4282-201ENST00000583613 67 ntBASIC3.17□□□□□ -1.9
FOXN1O15353 AP002826.1-201ENST00000608835 315 ntBASIC3.17□□□□□ -1.9
FOXN1O15353 AL365265.1-201ENST00000621045 234 ntBASIC3.17□□□□□ -1.9
FOXN1O15353 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
FOXN1O15353 AC135776.4-201ENST00000624300 1904 ntBASIC3.17□□□□□ -1.9
FOXN1O15353 AC009541.1-201ENST00000438279 2662 ntBASIC3.16□□□□□ -1.9
FOXN1O15353 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
FOXN1O15353 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
FOXN1O15353 BX322639.1-202ENST00000423987 2213 ntBASIC3.16□□□□□ -1.9
FOXN1O15353 RNU6-78P-201ENST00000362897 107 ntBASIC3.16□□□□□ -1.9
FOXN1O15353 Y_RNA.233-201ENST00000364407 101 ntBASIC3.16□□□□□ -1.9
FOXN1O15353 Y_RNA.240-201ENST00000364469 95 ntBASIC3.16□□□□□ -1.9
FOXN1O15353 Y_RNA.275-201ENST00000364726 110 ntBASIC3.16□□□□□ -1.9
FOXN1O15353 SNORD50.2-201ENST00000365465 70 ntBASIC3.16□□□□□ -1.9
FOXN1O15353 RNU6-81P-201ENST00000365608 104 ntBASIC3.16□□□□□ -1.9
FOXN1O15353 Y_RNA.418-201ENST00000384029 102 ntBASIC3.16□□□□□ -1.9
FOXN1O15353 MIR32-201ENST00000384965 70 ntBASIC3.16□□□□□ -1.9
FOXN1O15353 RPS4XP3-201ENST00000398541 413 ntBASIC3.16□□□□□ -1.9
FOXN1O15353 RNU6-394P-201ENST00000410735 107 ntBASIC3.16□□□□□ -1.9
FOXN1O15353 RNU2-61P-201ENST00000411069 191 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms