Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 MIR4295-201ENST00000585286 85 ntBASIC1.07□□□□□ -2.24
LSM1O15116 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.07□□□□□ -2.24
LSM1O15116 AC004492.1-201ENST00000607036 742 ntBASIC1.07□□□□□ -2.24
LSM1O15116 AC064836.2-201ENST00000609491 462 ntBASIC1.07□□□□□ -2.24
LSM1O15116 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
LSM1O15116 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
LSM1O15116 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
LSM1O15116 RNU1-22P-201ENST00000363334 158 ntBASIC1.06□□□□□ -2.24
LSM1O15116 RNA5SP99-201ENST00000364020 114 ntBASIC1.06□□□□□ -2.24
LSM1O15116 RNU6-1103P-201ENST00000384150 107 ntBASIC1.06□□□□□ -2.24
LSM1O15116 MIR586-201ENST00000385035 97 ntBASIC1.06□□□□□ -2.24
LSM1O15116 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.06□□□□□ -2.24
LSM1O15116 AL163195.1-201ENST00000496941 348 ntBASIC1.06□□□□□ -2.24
LSM1O15116 AC024995.1-201ENST00000523014 93 ntBASIC1.06□□□□□ -2.24
LSM1O15116 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
LSM1O15116 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.06□□□□□ -2.24
LSM1O15116 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.06□□□□□ -2.24
LSM1O15116 AL391840.1-201ENST00000571144 367 ntBASIC1.06□□□□□ -2.24
LSM1O15116 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.06□□□□□ -2.24
LSM1O15116 AL157834.3-201ENST00000615543 103 ntBASIC1.06□□□□□ -2.24
LSM1O15116 uc_338.34-201ENST00000617467 174 ntBASIC1.06□□□□□ -2.24
LSM1O15116 MIR8065-201ENST00000620577 100 ntBASIC1.06□□□□□ -2.24
LSM1O15116 AL391262.2-201ENST00000622466 494 ntBASIC1.06□□□□□ -2.24
LSM1O15116 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
LSM1O15116 RNU6-996P-201ENST00000365438 107 ntBASIC1.05□□□□□ -2.24
LSM1O15116 AC016909.1-201ENST00000415916 166 ntBASIC1.05□□□□□ -2.24
LSM1O15116 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.05□□□□□ -2.24
LSM1O15116 MTCO3P8-201ENST00000453691 755 ntBASIC1.05□□□□□ -2.24
LSM1O15116 MTCO2P18-201ENST00000457151 658 ntBASIC1.05□□□□□ -2.24
LSM1O15116 RPL39P28-201ENST00000465655 155 ntBASIC1.05□□□□□ -2.24
LSM1O15116 HMGN1P12-201ENST00000499125 195 ntBASIC1.05□□□□□ -2.24
LSM1O15116 AC093852.1-201ENST00000503587 266 ntBASIC1.05□□□□□ -2.24
LSM1O15116 RNU6-1069P-201ENST00000516612 133 ntBASIC1.05□□□□□ -2.24
LSM1O15116 RNU6-165P-201ENST00000517170 99 ntBASIC1.05□□□□□ -2.24
LSM1O15116 MIR5006-201ENST00000583027 110 ntBASIC1.05□□□□□ -2.24
LSM1O15116 AC008536.2-201ENST00000607284 349 ntBASIC1.05□□□□□ -2.24
LSM1O15116 AC040896.1-201ENST00000613819 479 ntBASIC1.05□□□□□ -2.24
LSM1O15116 AC099654.5-201ENST00000636479 350 ntBASIC1.05□□□□□ -2.24
LSM1O15116 U6.108-201ENST00000637764 58 ntBASIC1.05□□□□□ -2.24
LSM1O15116 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
LSM1O15116 Y_RNA.140-201ENST00000363474 103 ntBASIC1.04□□□□□ -2.24
LSM1O15116 RNU6-1158P-201ENST00000391167 107 ntBASIC1.04□□□□□ -2.24
LSM1O15116 RPL21P1-201ENST00000399532 476 ntBASIC1.04□□□□□ -2.24
LSM1O15116 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.04□□□□□ -2.24
LSM1O15116 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.04□□□□□ -2.24
LSM1O15116 PGBD4P5-201ENST00000445958 426 ntBASIC1.04□□□□□ -2.24
LSM1O15116 HSPE1P13-201ENST00000451143 297 ntBASIC1.04□□□□□ -2.24
LSM1O15116 RNU7-63P-201ENST00000459054 62 ntBASIC1.04□□□□□ -2.24
LSM1O15116 AC114982.1-201ENST00000469402 321 ntBASIC1.04□□□□□ -2.24
LSM1O15116 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.04□□□□□ -2.24
LSM1O15116 AC010493.1-201ENST00000513479 292 ntBASIC1.04□□□□□ -2.24
LSM1O15116 RN7SKP88-201ENST00000516847 250 ntBASIC1.04□□□□□ -2.24
LSM1O15116 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.04□□□□□ -2.24
LSM1O15116 MTND4P7-201ENST00000523876 130 ntBASIC1.04□□□□□ -2.24
LSM1O15116 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.04□□□□□ -2.24
LSM1O15116 SCOCP1-201ENST00000554676 349 ntBASIC1.04□□□□□ -2.24
LSM1O15116 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.04□□□□□ -2.24
LSM1O15116 AC087683.1-201ENST00000591187 441 ntBASIC1.04□□□□□ -2.24
LSM1O15116 AL391646.1-201ENST00000603860 190 ntBASIC1.04□□□□□ -2.24
LSM1O15116 MIR6078-201ENST00000611069 100 ntBASIC1.04□□□□□ -2.24
LSM1O15116 AC087683.2-201ENST00000611384 326 ntBASIC1.04□□□□□ -2.24
LSM1O15116 7SK.8-201ENST00000612110 250 ntBASIC1.04□□□□□ -2.24
LSM1O15116 AC021506.2-201ENST00000612354 169 ntBASIC1.04□□□□□ -2.24
LSM1O15116 7SK.11-201ENST00000615477 250 ntBASIC1.04□□□□□ -2.24
LSM1O15116 AC103705.1-201ENST00000619013 241 ntBASIC1.04□□□□□ -2.24
LSM1O15116 7SK.13-201ENST00000622040 250 ntBASIC1.04□□□□□ -2.24
LSM1O15116 AC008873.1-201ENST00000625051 138 ntBASIC1.04□□□□□ -2.24
LSM1O15116 AL391516.1-201ENST00000554380 2449 ntBASIC1.04□□□□□ -2.24
LSM1O15116 AL391987.6-201ENST00000305671 199 ntBASIC1.03□□□□□ -2.24
LSM1O15116 RNU6-348P-201ENST00000384386 107 ntBASIC1.03□□□□□ -2.24
LSM1O15116 MIR549A-201ENST00000385268 96 ntBASIC1.03□□□□□ -2.24
LSM1O15116 RNU6-1106P-201ENST00000390845 107 ntBASIC1.03□□□□□ -2.24
LSM1O15116 RNA5SP219-201ENST00000390940 113 ntBASIC1.03□□□□□ -2.24
LSM1O15116 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
LSM1O15116 MTCO2P19-201ENST00000427513 598 ntBASIC1.03□□□□□ -2.24
LSM1O15116 RPS6P15-201ENST00000431996 751 ntBASIC1.03□□□□□ -2.24
LSM1O15116 AL606517.2-201ENST00000442855 241 ntBASIC1.03□□□□□ -2.24
LSM1O15116 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.03□□□□□ -2.24
LSM1O15116 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.03□□□□□ -2.24
LSM1O15116 RPS26P45-201ENST00000471748 340 ntBASIC1.03□□□□□ -2.24
LSM1O15116 AF186996.7-201ENST00000492781 209 ntBASIC1.03□□□□□ -2.24
LSM1O15116 RNU6-1146P-201ENST00000516282 102 ntBASIC1.03□□□□□ -2.24
LSM1O15116 FGF7P1-201ENST00000582820 288 ntBASIC1.03□□□□□ -2.24
LSM1O15116 AL390123.1-201ENST00000603216 237 ntBASIC1.03□□□□□ -2.24
LSM1O15116 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.03□□□□□ -2.24
LSM1O15116 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.03□□□□□ -2.24
LSM1O15116 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.02□□□□□ -2.25
LSM1O15116 RNU6-82P-201ENST00000363970 107 ntBASIC1.02□□□□□ -2.25
LSM1O15116 RNU6-1329P-201ENST00000365664 107 ntBASIC1.02□□□□□ -2.25
LSM1O15116 RNU5A-6P-201ENST00000384136 116 ntBASIC1.02□□□□□ -2.25
LSM1O15116 SNORA25-201ENST00000384384 134 ntBASIC1.02□□□□□ -2.25
LSM1O15116 RNU6-417P-201ENST00000384712 107 ntBASIC1.02□□□□□ -2.25
LSM1O15116 RNA5SP467-201ENST00000391274 118 ntBASIC1.02□□□□□ -2.25
LSM1O15116 CDK8P2-201ENST00000415020 547 ntBASIC1.02□□□□□ -2.25
LSM1O15116 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.02□□□□□ -2.25
LSM1O15116 MTND3P9-201ENST00000429526 346 ntBASIC1.02□□□□□ -2.25
LSM1O15116 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.02□□□□□ -2.25
LSM1O15116 MTND1P27-201ENST00000451117 902 ntBASIC1.02□□□□□ -2.25
LSM1O15116 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.02□□□□□ -2.25
LSM1O15116 RPL39P38-201ENST00000467018 153 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms