Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.9□□□□□ -2.27
UPK1AO00322 U8.21-201ENST00000459536 136 ntBASIC0.9□□□□□ -2.27
UPK1AO00322 TRMT112P2-201ENST00000512910 132 ntBASIC0.9□□□□□ -2.27
UPK1AO00322 AC010493.1-201ENST00000513479 292 ntBASIC0.9□□□□□ -2.27
UPK1AO00322 AC108729.3-201ENST00000513484 108 ntBASIC0.9□□□□□ -2.27
UPK1AO00322 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.9□□□□□ -2.27
UPK1AO00322 AL512310.8-201ENST00000550183 120 ntBASIC0.9□□□□□ -2.27
UPK1AO00322 AC004223.2-201ENST00000590309 544 ntBASIC0.9□□□□□ -2.27
UPK1AO00322 AC109347.2-201ENST00000610220 349 ntBASIC0.9□□□□□ -2.27
UPK1AO00322 uc_338.34-201ENST00000617467 174 ntBASIC0.9□□□□□ -2.27
UPK1AO00322 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
UPK1AO00322 snoU2-30.2-201ENST00000362805 70 ntBASIC0.89□□□□□ -2.27
UPK1AO00322 SNORA4.2-201ENST00000365313 147 ntBASIC0.89□□□□□ -2.27
UPK1AO00322 RNU6-996P-201ENST00000365438 107 ntBASIC0.89□□□□□ -2.27
UPK1AO00322 MIR194-1-201ENST00000384892 85 ntBASIC0.89□□□□□ -2.27
UPK1AO00322 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
UPK1AO00322 RNA5SP323-201ENST00000391094 133 ntBASIC0.89□□□□□ -2.27
UPK1AO00322 AL606923.1-201ENST00000406616 190 ntBASIC0.89□□□□□ -2.27
UPK1AO00322 RNU6-321P-201ENST00000410912 106 ntBASIC0.89□□□□□ -2.27
UPK1AO00322 MTND3P9-201ENST00000429526 346 ntBASIC0.89□□□□□ -2.27
UPK1AO00322 USP9YP14-201ENST00000430663 563 ntBASIC0.89□□□□□ -2.27
UPK1AO00322 HMGN2P34-201ENST00000437647 269 ntBASIC0.89□□□□□ -2.27
UPK1AO00322 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.89□□□□□ -2.27
UPK1AO00322 RN7SKP88-201ENST00000516847 250 ntBASIC0.89□□□□□ -2.27
UPK1AO00322 RNU6-323P-201ENST00000521915 107 ntBASIC0.89□□□□□ -2.27
UPK1AO00322 DEFB131C-201ENST00000528817 165 ntBASIC0.89□□□□□ -2.27
UPK1AO00322 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.89□□□□□ -2.27
UPK1AO00322 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.89□□□□□ -2.27
UPK1AO00322 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.89□□□□□ -2.27
UPK1AO00322 AC040904.1-201ENST00000590850 223 ntBASIC0.89□□□□□ -2.27
UPK1AO00322 AC016727.2-201ENST00000603988 621 ntBASIC0.89□□□□□ -2.27
UPK1AO00322 AP000907.4-201ENST00000604143 237 ntBASIC0.89□□□□□ -2.27
UPK1AO00322 Z94722.1-201ENST00000604328 474 ntBASIC0.89□□□□□ -2.27
UPK1AO00322 7SK.8-201ENST00000612110 250 ntBASIC0.89□□□□□ -2.27
UPK1AO00322 7SK.11-201ENST00000615477 250 ntBASIC0.89□□□□□ -2.27
UPK1AO00322 7SK.13-201ENST00000622040 250 ntBASIC0.89□□□□□ -2.27
UPK1AO00322 AC006001.4-201ENST00000622243 395 ntBASIC0.89□□□□□ -2.27
UPK1AO00322 AL391262.2-201ENST00000622466 494 ntBASIC0.89□□□□□ -2.27
UPK1AO00322 AC009033.1-201ENST00000624279 431 ntBASIC0.89□□□□□ -2.27
UPK1AO00322 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.89□□□□□ -2.27
UPK1AO00322 Y_RNA.338-201ENST00000365320 114 ntBASIC0.88□□□□□ -2.27
UPK1AO00322 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.88□□□□□ -2.27
UPK1AO00322 SNORA29-201ENST00000384183 140 ntBASIC0.88□□□□□ -2.27
UPK1AO00322 RNU6-975P-201ENST00000384296 105 ntBASIC0.88□□□□□ -2.27
UPK1AO00322 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.88□□□□□ -2.27
UPK1AO00322 PGBD4P5-201ENST00000445958 426 ntBASIC0.88□□□□□ -2.27
UPK1AO00322 AC016717.1-201ENST00000448918 286 ntBASIC0.88□□□□□ -2.27
UPK1AO00322 HMGN1P7-201ENST00000491722 313 ntBASIC0.88□□□□□ -2.27
UPK1AO00322 AL133373.1-201ENST00000497098 94 ntBASIC0.88□□□□□ -2.27
UPK1AO00322 HMGN1P12-201ENST00000499125 195 ntBASIC0.88□□□□□ -2.27
UPK1AO00322 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.88□□□□□ -2.27
UPK1AO00322 RNU6-430P-201ENST00000517078 107 ntBASIC0.88□□□□□ -2.27
UPK1AO00322 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.88□□□□□ -2.27
UPK1AO00322 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.88□□□□□ -2.27
UPK1AO00322 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.88□□□□□ -2.27
UPK1AO00322 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.88□□□□□ -2.27
UPK1AO00322 Z99497.2-201ENST00000603634 310 ntBASIC0.88□□□□□ -2.27
UPK1AO00322 MZT1P2-201ENST00000604387 248 ntBASIC0.88□□□□□ -2.27
UPK1AO00322 AC068792.1-201ENST00000621354 417 ntBASIC0.88□□□□□ -2.27
UPK1AO00322 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
UPK1AO00322 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
UPK1AO00322 RNU6-950P-201ENST00000384651 107 ntBASIC0.87□□□□□ -2.27
UPK1AO00322 MIR549A-201ENST00000385268 96 ntBASIC0.87□□□□□ -2.27
UPK1AO00322 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
UPK1AO00322 MIR320B2-201ENST00000408479 138 ntBASIC0.87□□□□□ -2.27
UPK1AO00322 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.87□□□□□ -2.27
UPK1AO00322 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.87□□□□□ -2.27
UPK1AO00322 NFU1P2-201ENST00000448700 469 ntBASIC0.87□□□□□ -2.27
UPK1AO00322 RNU7-180P-201ENST00000459240 63 ntBASIC0.87□□□□□ -2.27
UPK1AO00322 AC025465.4-201ENST00000513422 638 ntBASIC0.87□□□□□ -2.27
UPK1AO00322 MTCO2P4-201ENST00000517968 247 ntBASIC0.87□□□□□ -2.27
UPK1AO00322 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.87□□□□□ -2.27
UPK1AO00322 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.87□□□□□ -2.27
UPK1AO00322 AL442163.3-201ENST00000554110 156 ntBASIC0.87□□□□□ -2.27
UPK1AO00322 MIR3124-201ENST00000582636 67 ntBASIC0.87□□□□□ -2.27
UPK1AO00322 SNRPGP20-201ENST00000604477 205 ntBASIC0.87□□□□□ -2.27
UPK1AO00322 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.87□□□□□ -2.27
UPK1AO00322 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.87□□□□□ -2.27
UPK1AO00322 RNU6-1123P-201ENST00000362347 106 ntBASIC0.86□□□□□ -2.27
UPK1AO00322 RNU6-1305P-201ENST00000364353 104 ntBASIC0.86□□□□□ -2.27
UPK1AO00322 RNU6-1187P-201ENST00000364771 110 ntBASIC0.86□□□□□ -2.27
UPK1AO00322 RNU6-534P-201ENST00000364877 106 ntBASIC0.86□□□□□ -2.27
UPK1AO00322 RNU6-968P-201ENST00000384076 107 ntBASIC0.86□□□□□ -2.27
UPK1AO00322 RNU6-417P-201ENST00000384712 107 ntBASIC0.86□□□□□ -2.27
UPK1AO00322 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
UPK1AO00322 SNORD37.1-201ENST00000390968 65 ntBASIC0.86□□□□□ -2.27
UPK1AO00322 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.86□□□□□ -2.27
UPK1AO00322 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.86□□□□□ -2.27
UPK1AO00322 AL445567.1-201ENST00000439121 144 ntBASIC0.86□□□□□ -2.27
UPK1AO00322 AC009237.7-201ENST00000447357 229 ntBASIC0.86□□□□□ -2.27
UPK1AO00322 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.86□□□□□ -2.27
UPK1AO00322 RPS27P1-201ENST00000450552 247 ntBASIC0.86□□□□□ -2.27
UPK1AO00322 HSPE1P13-201ENST00000451143 297 ntBASIC0.86□□□□□ -2.27
UPK1AO00322 SNORA14.1-201ENST00000516113 141 ntBASIC0.86□□□□□ -2.27
UPK1AO00322 AC087854.1-201ENST00000519706 414 ntBASIC0.86□□□□□ -2.27
UPK1AO00322 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.86□□□□□ -2.27
UPK1AO00322 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.86□□□□□ -2.27
UPK1AO00322 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.86□□□□□ -2.27
UPK1AO00322 AC016727.1-205ENST00000605437 569 ntBASIC0.86□□□□□ -2.27
UPK1AO00322 HULC.1-201ENST00000612720 240 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms