Protein–RNA interactions for Protein: B0FP48

UPK3BL1, Uroplakin-3b-like protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1B0FP48 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
UPK3BL1B0FP48 CEP170P1-201ENST00000502249 4587 ntBASIC3.54□□□□□ -1.84
UPK3BL1B0FP48 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
UPK3BL1B0FP48 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
UPK3BL1B0FP48 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
UPK3BL1B0FP48 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
UPK3BL1B0FP48 Y_RNA.243-201ENST00000364481 109 ntBASIC3.54□□□□□ -1.84
UPK3BL1B0FP48 SNORA67.2-201ENST00000384300 149 ntBASIC3.54□□□□□ -1.84
UPK3BL1B0FP48 MTCO2P33-201ENST00000402100 465 ntBASIC3.54□□□□□ -1.84
UPK3BL1B0FP48 RNU6-710P-201ENST00000410424 105 ntBASIC3.54□□□□□ -1.84
UPK3BL1B0FP48 TOMM22P2-201ENST00000430735 237 ntBASIC3.54□□□□□ -1.84
UPK3BL1B0FP48 Z75741.1-201ENST00000446793 314 ntBASIC3.54□□□□□ -1.84
UPK3BL1B0FP48 Y_RNA.637-201ENST00000459424 114 ntBASIC3.54□□□□□ -1.84
UPK3BL1B0FP48 RN7SL594P-201ENST00000470590 287 ntBASIC3.54□□□□□ -1.84
UPK3BL1B0FP48 UBE2DNL-203ENST00000474922 222 ntBASIC3.54□□□□□ -1.84
UPK3BL1B0FP48 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.54□□□□□ -1.84
UPK3BL1B0FP48 AC006445.1-201ENST00000491925 405 ntBASIC3.54□□□□□ -1.84
UPK3BL1B0FP48 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.54□□□□□ -1.84
UPK3BL1B0FP48 AC136628.3-201ENST00000521868 290 ntBASIC3.54□□□□□ -1.84
UPK3BL1B0FP48 DEFB131C-201ENST00000528817 165 ntBASIC3.54□□□□□ -1.84
UPK3BL1B0FP48 AC103810.1-201ENST00000579873 453 ntBASIC3.54□□□□□ -1.84
UPK3BL1B0FP48 MIR7112-201ENST00000616126 65 ntBASIC3.54□□□□□ -1.84
UPK3BL1B0FP48 UCA1.1-201ENST00000620952 75 ntBASIC3.54□□□□□ -1.84
UPK3BL1B0FP48 AC110079.1-202ENST00000635213 138 ntBASIC3.54□□□□□ -1.84
UPK3BL1B0FP48 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.54□□□□□ -1.84
UPK3BL1B0FP48 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.54□□□□□ -1.84
UPK3BL1B0FP48 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
UPK3BL1B0FP48 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.53□□□□□ -1.84
UPK3BL1B0FP48 Y_RNA.7-201ENST00000362352 102 ntBASIC3.53□□□□□ -1.84
UPK3BL1B0FP48 Y_RNA.121-201ENST00000363309 113 ntBASIC3.53□□□□□ -1.84
UPK3BL1B0FP48 U3.8-201ENST00000363675 217 ntBASIC3.53□□□□□ -1.84
UPK3BL1B0FP48 RNU6-324P-201ENST00000363957 106 ntBASIC3.53□□□□□ -1.84
UPK3BL1B0FP48 RNU6-704P-201ENST00000364162 103 ntBASIC3.53□□□□□ -1.84
UPK3BL1B0FP48 RNU6-312P-201ENST00000364629 107 ntBASIC3.53□□□□□ -1.84
UPK3BL1B0FP48 RNU6-283P-201ENST00000364788 107 ntBASIC3.53□□□□□ -1.84
UPK3BL1B0FP48 SNORA18.2-201ENST00000383865 132 ntBASIC3.53□□□□□ -1.84
UPK3BL1B0FP48 RNU6-804P-201ENST00000384286 107 ntBASIC3.53□□□□□ -1.84
UPK3BL1B0FP48 Y_RNA.571-201ENST00000384753 98 ntBASIC3.53□□□□□ -1.84
UPK3BL1B0FP48 MIR29B2-201ENST00000385055 81 ntBASIC3.53□□□□□ -1.84
UPK3BL1B0FP48 Y_RNA.580-201ENST00000391004 95 ntBASIC3.53□□□□□ -1.84
UPK3BL1B0FP48 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.53□□□□□ -1.84
UPK3BL1B0FP48 RN7SKP111-201ENST00000410349 271 ntBASIC3.53□□□□□ -1.84
UPK3BL1B0FP48 RNA5SP504-201ENST00000410676 117 ntBASIC3.53□□□□□ -1.84
UPK3BL1B0FP48 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.53□□□□□ -1.84
UPK3BL1B0FP48 Z98742.2-201ENST00000431564 187 ntBASIC3.53□□□□□ -1.84
UPK3BL1B0FP48 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.53□□□□□ -1.84
UPK3BL1B0FP48 HMGB3P3-201ENST00000510526 400 ntBASIC3.53□□□□□ -1.84
UPK3BL1B0FP48 MIR2114-201ENST00000516645 80 ntBASIC3.53□□□□□ -1.84
UPK3BL1B0FP48 SCARNA11.3-201ENST00000517276 130 ntBASIC3.53□□□□□ -1.84
UPK3BL1B0FP48 SUMO2P18-201ENST00000518873 252 ntBASIC3.53□□□□□ -1.84
UPK3BL1B0FP48 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
UPK3BL1B0FP48 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
UPK3BL1B0FP48 AC091564.4-201ENST00000533934 2194 ntBASIC3.53□□□□□ -1.84
UPK3BL1B0FP48 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
UPK3BL1B0FP48 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.53□□□□□ -1.84
UPK3BL1B0FP48 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.53□□□□□ -1.84
UPK3BL1B0FP48 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
UPK3BL1B0FP48 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
UPK3BL1B0FP48 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
UPK3BL1B0FP48 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.53□□□□□ -1.85
UPK3BL1B0FP48 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
UPK3BL1B0FP48 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
UPK3BL1B0FP48 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.52□□□□□ -1.85
UPK3BL1B0FP48 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
UPK3BL1B0FP48 MFSD8-233ENST00000641482 4860 ntBASIC3.52□□□□□ -1.85
UPK3BL1B0FP48 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
UPK3BL1B0FP48 SNORD115-30-201ENST00000364117 82 ntBASIC3.52□□□□□ -1.85
UPK3BL1B0FP48 SNORD87-201ENST00000364849 89 ntBASIC3.52□□□□□ -1.85
UPK3BL1B0FP48 RNA5SP240-201ENST00000365355 128 ntBASIC3.52□□□□□ -1.85
UPK3BL1B0FP48 AL606753.1-201ENST00000427435 87 ntBASIC3.52□□□□□ -1.85
UPK3BL1B0FP48 AC025518.1-201ENST00000479856 347 ntBASIC3.52□□□□□ -1.85
UPK3BL1B0FP48 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.52□□□□□ -1.85
UPK3BL1B0FP48 AC008739.2-201ENST00000597006 317 ntBASIC3.52□□□□□ -1.85
UPK3BL1B0FP48 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.52□□□□□ -1.85
UPK3BL1B0FP48 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.52□□□□□ -1.85
UPK3BL1B0FP48 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
UPK3BL1B0FP48 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.51□□□□□ -1.85
UPK3BL1B0FP48 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
UPK3BL1B0FP48 RNU4-35P-201ENST00000362588 141 ntBASIC3.51□□□□□ -1.85
UPK3BL1B0FP48 Y_RNA.238-201ENST00000364441 102 ntBASIC3.51□□□□□ -1.85
UPK3BL1B0FP48 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.51□□□□□ -1.85
UPK3BL1B0FP48 AC017083.1-201ENST00000428093 483 ntBASIC3.51□□□□□ -1.85
UPK3BL1B0FP48 S100A11P2-201ENST00000467589 312 ntBASIC3.51□□□□□ -1.85
UPK3BL1B0FP48 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.51□□□□□ -1.85
UPK3BL1B0FP48 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.51□□□□□ -1.85
UPK3BL1B0FP48 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.51□□□□□ -1.85
UPK3BL1B0FP48 AC104465.1-201ENST00000611365 139 ntBASIC3.51□□□□□ -1.85
UPK3BL1B0FP48 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.51□□□□□ -1.85
UPK3BL1B0FP48 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
UPK3BL1B0FP48 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.51□□□□□ -1.85
UPK3BL1B0FP48 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.51□□□□□ -1.85
UPK3BL1B0FP48 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
UPK3BL1B0FP48 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
UPK3BL1B0FP48 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
UPK3BL1B0FP48 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.5□□□□□ -1.85
UPK3BL1B0FP48 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
UPK3BL1B0FP48 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
UPK3BL1B0FP48 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.5□□□□□ -1.85
UPK3BL1B0FP48 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
UPK3BL1B0FP48 RNU6-801P-201ENST00000364087 105 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 147.5 ms