Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 AC006130.2-201ENST00000586202 326 ntBASIC2.67□□□□□ -1.98
CGB1A6NKQ9 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.67□□□□□ -1.98
CGB1A6NKQ9 MIR7851-201ENST00000610611 160 ntBASIC2.67□□□□□ -1.98
CGB1A6NKQ9 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.67□□□□□ -1.98
CGB1A6NKQ9 SCARNA17.4-201ENST00000614296 143 ntBASIC2.67□□□□□ -1.98
CGB1A6NKQ9 AC004467.1-201ENST00000615678 330 ntBASIC2.67□□□□□ -1.98
CGB1A6NKQ9 snoU18.1-201ENST00000629629 71 ntBASIC2.67□□□□□ -1.98
CGB1A6NKQ9 AC012442.3-202ENST00000636742 206 ntBASIC2.67□□□□□ -1.98
CGB1A6NKQ9 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CGB1A6NKQ9 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CGB1A6NKQ9 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CGB1A6NKQ9 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.67□□□□□ -1.98
CGB1A6NKQ9 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
CGB1A6NKQ9 RBBP8P1-201ENST00000449447 1844 ntBASIC2.66□□□□□ -1.98
CGB1A6NKQ9 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
CGB1A6NKQ9 Y_RNA.101-201ENST00000363154 102 ntBASIC2.66□□□□□ -1.98
CGB1A6NKQ9 Y_RNA.343-201ENST00000365354 112 ntBASIC2.66□□□□□ -1.98
CGB1A6NKQ9 SNORD116-18-201ENST00000383961 92 ntBASIC2.66□□□□□ -1.98
CGB1A6NKQ9 MIR627-201ENST00000384979 97 ntBASIC2.66□□□□□ -1.98
CGB1A6NKQ9 MIR147B-201ENST00000390185 80 ntBASIC2.66□□□□□ -1.98
CGB1A6NKQ9 Y_RNA.580-201ENST00000391004 95 ntBASIC2.66□□□□□ -1.98
CGB1A6NKQ9 RNU5E-9P-201ENST00000411164 104 ntBASIC2.66□□□□□ -1.98
CGB1A6NKQ9 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.66□□□□□ -1.98
CGB1A6NKQ9 HMGN1P18-201ENST00000457642 277 ntBASIC2.66□□□□□ -1.98
CGB1A6NKQ9 HMGB3P3-201ENST00000510526 400 ntBASIC2.66□□□□□ -1.98
CGB1A6NKQ9 RNU6-155P-201ENST00000516347 100 ntBASIC2.66□□□□□ -1.98
CGB1A6NKQ9 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.66□□□□□ -1.98
CGB1A6NKQ9 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.66□□□□□ -1.98
CGB1A6NKQ9 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CGB1A6NKQ9 MIR3616-201ENST00000584070 92 ntBASIC2.66□□□□□ -1.98
CGB1A6NKQ9 AC091932.3-201ENST00000624223 323 ntBASIC2.66□□□□□ -1.98
CGB1A6NKQ9 MIR7515-201ENST00000637837 67 ntBASIC2.66□□□□□ -1.98
CGB1A6NKQ9 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CGB1A6NKQ9 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.66□□□□□ -1.98
CGB1A6NKQ9 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CGB1A6NKQ9 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.65□□□□□ -1.98
CGB1A6NKQ9 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.65□□□□□ -1.98
CGB1A6NKQ9 Y_RNA.7-201ENST00000362352 102 ntBASIC2.65□□□□□ -1.99
CGB1A6NKQ9 RNU1-70P-201ENST00000362618 164 ntBASIC2.65□□□□□ -1.99
CGB1A6NKQ9 RNU6-1272P-201ENST00000362776 107 ntBASIC2.65□□□□□ -1.99
CGB1A6NKQ9 RNU6-312P-201ENST00000364629 107 ntBASIC2.65□□□□□ -1.99
CGB1A6NKQ9 Y_RNA.571-201ENST00000384753 98 ntBASIC2.65□□□□□ -1.99
CGB1A6NKQ9 RNU6ATAC-201ENST00000408749 126 ntBASIC2.65□□□□□ -1.99
CGB1A6NKQ9 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.65□□□□□ -1.99
CGB1A6NKQ9 RN7SKP202-201ENST00000410439 330 ntBASIC2.65□□□□□ -1.99
CGB1A6NKQ9 RN7SKP27-201ENST00000410684 333 ntBASIC2.65□□□□□ -1.99
CGB1A6NKQ9 BTF3P11-201ENST00000426582 477 ntBASIC2.65□□□□□ -1.99
CGB1A6NKQ9 AL133547.1-201ENST00000448546 220 ntBASIC2.65□□□□□ -1.99
CGB1A6NKQ9 RN7SL542P-201ENST00000467147 294 ntBASIC2.65□□□□□ -1.99
CGB1A6NKQ9 AC140059.1-201ENST00000489238 361 ntBASIC2.65□□□□□ -1.99
CGB1A6NKQ9 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.65□□□□□ -1.99
CGB1A6NKQ9 SNORA31.16-201ENST00000516773 139 ntBASIC2.65□□□□□ -1.99
CGB1A6NKQ9 CYP4A27P-201ENST00000567218 190 ntBASIC2.65□□□□□ -1.99
CGB1A6NKQ9 MIR3145-201ENST00000580727 82 ntBASIC2.65□□□□□ -1.99
CGB1A6NKQ9 MIR3136-201ENST00000583498 78 ntBASIC2.65□□□□□ -1.99
CGB1A6NKQ9 AL034408.1-202ENST00000636088 415 ntBASIC2.65□□□□□ -1.99
CGB1A6NKQ9 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
CGB1A6NKQ9 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
CGB1A6NKQ9 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.65□□□□□ -1.99
CGB1A6NKQ9 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
CGB1A6NKQ9 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CGB1A6NKQ9 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CGB1A6NKQ9 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
CGB1A6NKQ9 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
CGB1A6NKQ9 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.65□□□□□ -1.99
CGB1A6NKQ9 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.64□□□□□ -1.99
CGB1A6NKQ9 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CGB1A6NKQ9 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
CGB1A6NKQ9 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.64□□□□□ -1.99
CGB1A6NKQ9 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CGB1A6NKQ9 RNA5SP119-201ENST00000362715 117 ntBASIC2.64□□□□□ -1.99
CGB1A6NKQ9 RNU2-54P-201ENST00000410299 190 ntBASIC2.64□□□□□ -1.99
CGB1A6NKQ9 RNA5SP475-201ENST00000410568 110 ntBASIC2.64□□□□□ -1.99
CGB1A6NKQ9 RNU2-51P-201ENST00000410708 197 ntBASIC2.64□□□□□ -1.99
CGB1A6NKQ9 ELOCP21-201ENST00000412558 336 ntBASIC2.64□□□□□ -1.99
CGB1A6NKQ9 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.64□□□□□ -1.99
CGB1A6NKQ9 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.64□□□□□ -1.99
CGB1A6NKQ9 IFNA11P-201ENST00000446352 526 ntBASIC2.64□□□□□ -1.99
CGB1A6NKQ9 AC091179.3-201ENST00000474761 144 ntBASIC2.64□□□□□ -1.99
CGB1A6NKQ9 AC090525.1-201ENST00000479116 478 ntBASIC2.64□□□□□ -1.99
CGB1A6NKQ9 FCF1P8-201ENST00000510322 597 ntBASIC2.64□□□□□ -1.99
CGB1A6NKQ9 RNU6-966P-201ENST00000516479 104 ntBASIC2.64□□□□□ -1.99
CGB1A6NKQ9 RNU6-56P-201ENST00000516986 93 ntBASIC2.64□□□□□ -1.99
CGB1A6NKQ9 RNU1-45P-201ENST00000517191 141 ntBASIC2.64□□□□□ -1.99
CGB1A6NKQ9 AC026403.1-201ENST00000518938 295 ntBASIC2.64□□□□□ -1.99
CGB1A6NKQ9 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.64□□□□□ -1.99
CGB1A6NKQ9 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.64□□□□□ -1.99
CGB1A6NKQ9 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.64□□□□□ -1.99
CGB1A6NKQ9 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.64□□□□□ -1.99
CGB1A6NKQ9 AC103810.1-201ENST00000579873 453 ntBASIC2.64□□□□□ -1.99
CGB1A6NKQ9 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.64□□□□□ -1.99
CGB1A6NKQ9 SNRPGP20-201ENST00000604477 205 ntBASIC2.64□□□□□ -1.99
CGB1A6NKQ9 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.64□□□□□ -1.99
CGB1A6NKQ9 AC084757.4-201ENST00000616350 526 ntBASIC2.64□□□□□ -1.99
CGB1A6NKQ9 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.64□□□□□ -1.99
CGB1A6NKQ9 MIR7157-201ENST00000635801 60 ntBASIC2.64□□□□□ -1.99
CGB1A6NKQ9 MIR3674-201ENST00000636576 68 ntBASIC2.64□□□□□ -1.99
CGB1A6NKQ9 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.64□□□□□ -1.99
CGB1A6NKQ9 AL161912.2-201ENST00000565707 3007 ntBASIC2.64□□□□□ -1.99
CGB1A6NKQ9 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 145.5 ms