Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 MIR1248-201ENST00000629190 106 ntBASIC2.64□□□□□ -1.99
MBD3L4A6NDZ8 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.64□□□□□ -1.99
MBD3L4A6NDZ8 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
MBD3L4A6NDZ8 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
MBD3L4A6NDZ8 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.64□□□□□ -1.99
MBD3L4A6NDZ8 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
MBD3L4A6NDZ8 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.63□□□□□ -1.99
MBD3L4A6NDZ8 RNA5SP383-201ENST00000362934 120 ntBASIC2.63□□□□□ -1.99
MBD3L4A6NDZ8 SNORD87-201ENST00000364849 89 ntBASIC2.63□□□□□ -1.99
MBD3L4A6NDZ8 MRPL35P1-201ENST00000404272 572 ntBASIC2.63□□□□□ -1.99
MBD3L4A6NDZ8 AL357139.1-201ENST00000407792 426 ntBASIC2.63□□□□□ -1.99
MBD3L4A6NDZ8 RNA5SP274-201ENST00000410484 108 ntBASIC2.63□□□□□ -1.99
MBD3L4A6NDZ8 ARL5AP4-201ENST00000430731 512 ntBASIC2.63□□□□□ -1.99
MBD3L4A6NDZ8 RNU6-625P-201ENST00000459412 107 ntBASIC2.63□□□□□ -1.99
MBD3L4A6NDZ8 HMGN1P10-201ENST00000474557 553 ntBASIC2.63□□□□□ -1.99
MBD3L4A6NDZ8 ATP5EP1-201ENST00000510257 156 ntBASIC2.63□□□□□ -1.99
MBD3L4A6NDZ8 SNORA64.4-201ENST00000516632 81 ntBASIC2.63□□□□□ -1.99
MBD3L4A6NDZ8 RNU6-107P-201ENST00000516643 102 ntBASIC2.63□□□□□ -1.99
MBD3L4A6NDZ8 RNU6-635P-201ENST00000516651 102 ntBASIC2.63□□□□□ -1.99
MBD3L4A6NDZ8 Y_RNA.713-201ENST00000517013 96 ntBASIC2.63□□□□□ -1.99
MBD3L4A6NDZ8 RNA5SP490-201ENST00000517141 136 ntBASIC2.63□□□□□ -1.99
MBD3L4A6NDZ8 AL117187.1-201ENST00000555482 181 ntBASIC2.63□□□□□ -1.99
MBD3L4A6NDZ8 GTF3AP2-201ENST00000557014 266 ntBASIC2.63□□□□□ -1.99
MBD3L4A6NDZ8 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.63□□□□□ -1.99
MBD3L4A6NDZ8 AC008269.2-201ENST00000561915 1105 ntBASIC2.63□□□□□ -1.99
MBD3L4A6NDZ8 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.63□□□□□ -1.99
MBD3L4A6NDZ8 AC068205.3-201ENST00000636385 468 ntBASIC2.63□□□□□ -1.99
MBD3L4A6NDZ8 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.63□□□□□ -1.99
MBD3L4A6NDZ8 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
MBD3L4A6NDZ8 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
MBD3L4A6NDZ8 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.62□□□□□ -1.99
MBD3L4A6NDZ8 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
MBD3L4A6NDZ8 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.62□□□□□ -1.99
MBD3L4A6NDZ8 SNORA9.2-201ENST00000365361 133 ntBASIC2.62□□□□□ -1.99
MBD3L4A6NDZ8 RNU6-438P-201ENST00000365561 103 ntBASIC2.62□□□□□ -1.99
MBD3L4A6NDZ8 DYNLT3P1-201ENST00000378574 347 ntBASIC2.62□□□□□ -1.99
MBD3L4A6NDZ8 AL139281.1-201ENST00000422120 335 ntBASIC2.62□□□□□ -1.99
MBD3L4A6NDZ8 AC009238.1-201ENST00000442165 424 ntBASIC2.62□□□□□ -1.99
MBD3L4A6NDZ8 AL135938.1-201ENST00000443141 297 ntBASIC2.62□□□□□ -1.99
MBD3L4A6NDZ8 AC073910.1-201ENST00000445047 438 ntBASIC2.62□□□□□ -1.99
MBD3L4A6NDZ8 AC009237.6-201ENST00000446969 424 ntBASIC2.62□□□□□ -1.99
MBD3L4A6NDZ8 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.62□□□□□ -1.99
MBD3L4A6NDZ8 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.62□□□□□ -1.99
MBD3L4A6NDZ8 SCGB1D5P-201ENST00000515134 247 ntBASIC2.62□□□□□ -1.99
MBD3L4A6NDZ8 RNU6-408P-201ENST00000515910 100 ntBASIC2.62□□□□□ -1.99
MBD3L4A6NDZ8 RNY3P15-201ENST00000516297 97 ntBASIC2.62□□□□□ -1.99
MBD3L4A6NDZ8 RNA5SP367-201ENST00000516557 118 ntBASIC2.62□□□□□ -1.99
MBD3L4A6NDZ8 RNU6-667P-201ENST00000517186 102 ntBASIC2.62□□□□□ -1.99
MBD3L4A6NDZ8 MIR3162-201ENST00000581818 82 ntBASIC2.62□□□□□ -1.99
MBD3L4A6NDZ8 ELOCP29-201ENST00000588193 334 ntBASIC2.62□□□□□ -1.99
MBD3L4A6NDZ8 AC007318.2-201ENST00000620999 243 ntBASIC2.62□□□□□ -1.99
MBD3L4A6NDZ8 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.62□□□□□ -1.99
MBD3L4A6NDZ8 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.62□□□□□ -1.99
MBD3L4A6NDZ8 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.62□□□□□ -1.99
MBD3L4A6NDZ8 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.61□□□□□ -1.99
MBD3L4A6NDZ8 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
MBD3L4A6NDZ8 RNU6-545P-201ENST00000362681 104 ntBASIC2.61□□□□□ -1.99
MBD3L4A6NDZ8 SNORD56.3-201ENST00000363507 71 ntBASIC2.61□□□□□ -1.99
MBD3L4A6NDZ8 RNU6-1305P-201ENST00000364353 104 ntBASIC2.61□□□□□ -1.99
MBD3L4A6NDZ8 RNU6-1105P-201ENST00000384774 107 ntBASIC2.61□□□□□ -1.99
MBD3L4A6NDZ8 AL079342.1-201ENST00000401460 267 ntBASIC2.61□□□□□ -1.99
MBD3L4A6NDZ8 RNU6-130P-201ENST00000411112 103 ntBASIC2.61□□□□□ -1.99
MBD3L4A6NDZ8 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.61□□□□□ -1.99
MBD3L4A6NDZ8 AL358176.2-201ENST00000425769 204 ntBASIC2.61□□□□□ -1.99
MBD3L4A6NDZ8 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.61□□□□□ -1.99
MBD3L4A6NDZ8 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.61□□□□□ -1.99
MBD3L4A6NDZ8 RNU6-991P-201ENST00000516168 107 ntBASIC2.61□□□□□ -1.99
MBD3L4A6NDZ8 RNU6-897P-201ENST00000517135 105 ntBASIC2.61□□□□□ -1.99
MBD3L4A6NDZ8 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.61□□□□□ -1.99
MBD3L4A6NDZ8 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.61□□□□□ -1.99
MBD3L4A6NDZ8 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.61□□□□□ -1.99
MBD3L4A6NDZ8 MIR4753-201ENST00000585119 83 ntBASIC2.61□□□□□ -1.99
MBD3L4A6NDZ8 AC010205.1-201ENST00000616668 449 ntBASIC2.61□□□□□ -1.99
MBD3L4A6NDZ8 U4atac.1-201ENST00000618345 95 ntBASIC2.61□□□□□ -1.99
MBD3L4A6NDZ8 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.61□□□□□ -1.99
MBD3L4A6NDZ8 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
MBD3L4A6NDZ8 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
MBD3L4A6NDZ8 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
MBD3L4A6NDZ8 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.6□□□□□ -1.99
MBD3L4A6NDZ8 RNU6-238P-201ENST00000363313 106 ntBASIC2.6□□□□□ -1.99
MBD3L4A6NDZ8 SNORA38-201ENST00000363946 132 ntBASIC2.6□□□□□ -1.99
MBD3L4A6NDZ8 SNORA25B-201ENST00000365507 128 ntBASIC2.6□□□□□ -1.99
MBD3L4A6NDZ8 Y_RNA.498-201ENST00000384460 102 ntBASIC2.6□□□□□ -1.99
MBD3L4A6NDZ8 MIR1283-1-201ENST00000408494 87 ntBASIC2.6□□□□□ -1.99
MBD3L4A6NDZ8 MIR548F4-201ENST00000408515 105 ntBASIC2.6□□□□□ -1.99
MBD3L4A6NDZ8 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.6□□□□□ -1.99
MBD3L4A6NDZ8 MTND3P2-201ENST00000438452 342 ntBASIC2.6□□□□□ -1.99
MBD3L4A6NDZ8 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.6□□□□□ -1.99
MBD3L4A6NDZ8 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.6□□□□□ -1.99
MBD3L4A6NDZ8 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.6□□□□□ -1.99
MBD3L4A6NDZ8 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.6□□□□□ -1.99
MBD3L4A6NDZ8 AC074133.1-201ENST00000515696 183 ntBASIC2.6□□□□□ -1.99
MBD3L4A6NDZ8 RPPH1-2P-201ENST00000516688 293 ntBASIC2.6□□□□□ -1.99
MBD3L4A6NDZ8 AC018448.1-201ENST00000552843 316 ntBASIC2.6□□□□□ -1.99
MBD3L4A6NDZ8 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.6□□□□□ -1.99
MBD3L4A6NDZ8 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.6□□□□□ -1.99
MBD3L4A6NDZ8 AC130454.1-201ENST00000622948 401 ntBASIC2.6□□□□□ -1.99
MBD3L4A6NDZ8 AC008873.1-201ENST00000625051 138 ntBASIC2.6□□□□□ -1.99
MBD3L4A6NDZ8 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
MBD3L4A6NDZ8 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms