Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC040926.1-201ENST00000530195 238 ntBASIC2.45□□□□□ -2.02
TCRBV7S3A2A0A539 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.45□□□□□ -2.02
TCRBV7S3A2A0A539 MIR5695-201ENST00000579717 85 ntBASIC2.45□□□□□ -2.02
TCRBV7S3A2A0A539 TCL6_2.1-201ENST00000615162 119 ntBASIC2.45□□□□□ -2.02
TCRBV7S3A2A0A539 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.45□□□□□ -2.02
TCRBV7S3A2A0A539 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.45□□□□□ -2.02
TCRBV7S3A2A0A539 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
TCRBV7S3A2A0A539 RNU1-76P-201ENST00000362903 159 ntBASIC2.44□□□□□ -2.02
TCRBV7S3A2A0A539 RNU6-1180P-201ENST00000364935 107 ntBASIC2.44□□□□□ -2.02
TCRBV7S3A2A0A539 SNORA63.7-201ENST00000365579 123 ntBASIC2.44□□□□□ -2.02
TCRBV7S3A2A0A539 RNU6-1145P-201ENST00000384246 107 ntBASIC2.44□□□□□ -2.02
TCRBV7S3A2A0A539 MIR329-1-201ENST00000385028 80 ntBASIC2.44□□□□□ -2.02
TCRBV7S3A2A0A539 MIR1294-201ENST00000408503 142 ntBASIC2.44□□□□□ -2.02
TCRBV7S3A2A0A539 RNU6-101P-201ENST00000410323 104 ntBASIC2.44□□□□□ -2.02
TCRBV7S3A2A0A539 RNU2-63P-201ENST00000410792 194 ntBASIC2.44□□□□□ -2.02
TCRBV7S3A2A0A539 AC113618.1-201ENST00000416747 285 ntBASIC2.44□□□□□ -2.02
TCRBV7S3A2A0A539 MTND2P23-201ENST00000422990 651 ntBASIC2.44□□□□□ -2.02
TCRBV7S3A2A0A539 AC063976.3-201ENST00000426849 329 ntBASIC2.44□□□□□ -2.02
TCRBV7S3A2A0A539 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.44□□□□□ -2.02
TCRBV7S3A2A0A539 RNA5SP356-201ENST00000515972 94 ntBASIC2.44□□□□□ -2.02
TCRBV7S3A2A0A539 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.44□□□□□ -2.02
TCRBV7S3A2A0A539 SNORA25.14-201ENST00000516481 132 ntBASIC2.44□□□□□ -2.02
TCRBV7S3A2A0A539 RN7SKP40-201ENST00000517211 242 ntBASIC2.44□□□□□ -2.02
TCRBV7S3A2A0A539 CBX3P7-201ENST00000532876 502 ntBASIC2.44□□□□□ -2.02
TCRBV7S3A2A0A539 AC093023.1-201ENST00000547375 507 ntBASIC2.44□□□□□ -2.02
TCRBV7S3A2A0A539 AC090517.1-201ENST00000569307 266 ntBASIC2.44□□□□□ -2.02
TCRBV7S3A2A0A539 AC113195.1-201ENST00000579952 141 ntBASIC2.44□□□□□ -2.02
TCRBV7S3A2A0A539 AC067747.1-201ENST00000608026 250 ntBASIC2.44□□□□□ -2.02
TCRBV7S3A2A0A539 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
TCRBV7S3A2A0A539 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
TCRBV7S3A2A0A539 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.43□□□□□ -2.02
TCRBV7S3A2A0A539 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.43□□□□□ -2.02
TCRBV7S3A2A0A539 RNU6-879P-201ENST00000364328 108 ntBASIC2.43□□□□□ -2.02
TCRBV7S3A2A0A539 RNU4-50P-201ENST00000364361 141 ntBASIC2.43□□□□□ -2.02
TCRBV7S3A2A0A539 Y_RNA.389-201ENST00000383924 113 ntBASIC2.43□□□□□ -2.02
TCRBV7S3A2A0A539 RNU6-26P-201ENST00000383985 107 ntBASIC2.43□□□□□ -2.02
TCRBV7S3A2A0A539 RNU6-708P-201ENST00000384217 107 ntBASIC2.43□□□□□ -2.02
TCRBV7S3A2A0A539 Y_RNA.527-201ENST00000384573 102 ntBASIC2.43□□□□□ -2.02
TCRBV7S3A2A0A539 Y_RNA.551-201ENST00000384661 102 ntBASIC2.43□□□□□ -2.02
TCRBV7S3A2A0A539 MIR1252-201ENST00000408861 65 ntBASIC2.43□□□□□ -2.02
TCRBV7S3A2A0A539 COTL1P1-201ENST00000422309 375 ntBASIC2.43□□□□□ -2.02
TCRBV7S3A2A0A539 AC027124.2-201ENST00000428249 105 ntBASIC2.43□□□□□ -2.02
TCRBV7S3A2A0A539 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.43□□□□□ -2.02
TCRBV7S3A2A0A539 UBBP3-201ENST00000445497 241 ntBASIC2.43□□□□□ -2.02
TCRBV7S3A2A0A539 AC009237.7-201ENST00000447357 229 ntBASIC2.43□□□□□ -2.02
TCRBV7S3A2A0A539 AC007395.1-201ENST00000451333 677 ntBASIC2.43□□□□□ -2.02
TCRBV7S3A2A0A539 AL109933.2-201ENST00000452651 260 ntBASIC2.43□□□□□ -2.02
TCRBV7S3A2A0A539 MTCO3P8-201ENST00000453691 755 ntBASIC2.43□□□□□ -2.02
TCRBV7S3A2A0A539 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.43□□□□□ -2.02
TCRBV7S3A2A0A539 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.43□□□□□ -2.02
TCRBV7S3A2A0A539 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.43□□□□□ -2.02
TCRBV7S3A2A0A539 RNU6-344P-201ENST00000516635 111 ntBASIC2.43□□□□□ -2.02
TCRBV7S3A2A0A539 Y_RNA.720-201ENST00000517166 92 ntBASIC2.43□□□□□ -2.02
TCRBV7S3A2A0A539 CYCSP23-201ENST00000519781 313 ntBASIC2.43□□□□□ -2.02
TCRBV7S3A2A0A539 HSPE1P20-201ENST00000538133 289 ntBASIC2.43□□□□□ -2.02
TCRBV7S3A2A0A539 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.43□□□□□ -2.02
TCRBV7S3A2A0A539 RPS29P30-201ENST00000600975 111 ntBASIC2.43□□□□□ -2.02
TCRBV7S3A2A0A539 AC124312.5-201ENST00000604451 268 ntBASIC2.43□□□□□ -2.02
TCRBV7S3A2A0A539 AC010999.1-201ENST00000611856 324 ntBASIC2.43□□□□□ -2.02
TCRBV7S3A2A0A539 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
TCRBV7S3A2A0A539 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
TCRBV7S3A2A0A539 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.43□□□□□ -2.02
TCRBV7S3A2A0A539 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
TCRBV7S3A2A0A539 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.42□□□□□ -2.02
TCRBV7S3A2A0A539 SNORA18.2-201ENST00000383865 132 ntBASIC2.42□□□□□ -2.02
TCRBV7S3A2A0A539 MIR549A-201ENST00000385268 96 ntBASIC2.42□□□□□ -2.02
TCRBV7S3A2A0A539 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
TCRBV7S3A2A0A539 snosnR66.1-201ENST00000391095 99 ntBASIC2.42□□□□□ -2.02
TCRBV7S3A2A0A539 AL359511.1-201ENST00000402970 211 ntBASIC2.42□□□□□ -2.02
TCRBV7S3A2A0A539 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
TCRBV7S3A2A0A539 RNU2-25P-201ENST00000411041 191 ntBASIC2.42□□□□□ -2.02
TCRBV7S3A2A0A539 RNU6-1001P-201ENST00000411265 100 ntBASIC2.42□□□□□ -2.02
TCRBV7S3A2A0A539 AC004866.1-201ENST00000411748 78 ntBASIC2.42□□□□□ -2.02
TCRBV7S3A2A0A539 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.42□□□□□ -2.02
TCRBV7S3A2A0A539 SDAD1P3-201ENST00000427380 333 ntBASIC2.42□□□□□ -2.02
TCRBV7S3A2A0A539 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.42□□□□□ -2.02
TCRBV7S3A2A0A539 AC004386.2-201ENST00000441858 148 ntBASIC2.42□□□□□ -2.02
TCRBV7S3A2A0A539 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.42□□□□□ -2.02
TCRBV7S3A2A0A539 AC026436.1-201ENST00000510537 270 ntBASIC2.42□□□□□ -2.02
TCRBV7S3A2A0A539 RNU6-1012P-201ENST00000516606 109 ntBASIC2.42□□□□□ -2.02
TCRBV7S3A2A0A539 RNU2-44P-201ENST00000516795 194 ntBASIC2.42□□□□□ -2.02
TCRBV7S3A2A0A539 Y_RNA.715-201ENST00000517082 110 ntBASIC2.42□□□□□ -2.02
TCRBV7S3A2A0A539 AC034114.1-201ENST00000520293 285 ntBASIC2.42□□□□□ -2.02
TCRBV7S3A2A0A539 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.42□□□□□ -2.02
TCRBV7S3A2A0A539 AC023824.2-201ENST00000566185 400 ntBASIC2.42□□□□□ -2.02
TCRBV7S3A2A0A539 AL121655.1-201ENST00000605811 308 ntBASIC2.42□□□□□ -2.02
TCRBV7S3A2A0A539 AL021879.1-201ENST00000611756 288 ntBASIC2.42□□□□□ -2.02
TCRBV7S3A2A0A539 AC010205.1-201ENST00000616668 449 ntBASIC2.42□□□□□ -2.02
TCRBV7S3A2A0A539 U4.3-201ENST00000621047 82 ntBASIC2.42□□□□□ -2.02
TCRBV7S3A2A0A539 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
TCRBV7S3A2A0A539 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
TCRBV7S3A2A0A539 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
TCRBV7S3A2A0A539 ZNF271P-202ENST00000465539 1970 ntBASIC2.41□□□□□ -2.02
TCRBV7S3A2A0A539 RNA5SP361-201ENST00000362686 118 ntBASIC2.41□□□□□ -2.02
TCRBV7S3A2A0A539 RNA5SP68-201ENST00000363885 119 ntBASIC2.41□□□□□ -2.02
TCRBV7S3A2A0A539 RNA5SP125-201ENST00000364843 120 ntBASIC2.41□□□□□ -2.02
TCRBV7S3A2A0A539 RNU6-793P-201ENST00000384233 104 ntBASIC2.41□□□□□ -2.02
TCRBV7S3A2A0A539 AC009963.1-201ENST00000417265 157 ntBASIC2.41□□□□□ -2.02
TCRBV7S3A2A0A539 AL445305.1-201ENST00000432577 575 ntBASIC2.41□□□□□ -2.02
TCRBV7S3A2A0A539 CR769767.1-201ENST00000436337 346 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms