Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 SNORA12.2-201ENST00000391040 156 ntBASIC2.79□□□□□ -1.96
CCDC187A0A096LP49 SNORA26.7-201ENST00000391288 122 ntBASIC2.79□□□□□ -1.96
CCDC187A0A096LP49 RPL21P3-201ENST00000395517 478 ntBASIC2.79□□□□□ -1.96
CCDC187A0A096LP49 RNA5SP344-201ENST00000411081 104 ntBASIC2.79□□□□□ -1.96
CCDC187A0A096LP49 RPL32P35-201ENST00000415214 394 ntBASIC2.79□□□□□ -1.96
CCDC187A0A096LP49 AC097463.2-201ENST00000421074 142 ntBASIC2.79□□□□□ -1.96
CCDC187A0A096LP49 AC019205.3-201ENST00000424573 156 ntBASIC2.79□□□□□ -1.96
CCDC187A0A096LP49 AC092423.1-201ENST00000430165 186 ntBASIC2.79□□□□□ -1.96
CCDC187A0A096LP49 AC244505.4-201ENST00000434905 287 ntBASIC2.79□□□□□ -1.96
CCDC187A0A096LP49 RPS15AP7-201ENST00000439294 405 ntBASIC2.79□□□□□ -1.96
CCDC187A0A096LP49 SSXP5-201ENST00000443473 287 ntBASIC2.79□□□□□ -1.96
CCDC187A0A096LP49 UBBP3-201ENST00000445497 241 ntBASIC2.79□□□□□ -1.96
CCDC187A0A096LP49 AC016700.2-201ENST00000446011 156 ntBASIC2.79□□□□□ -1.96
CCDC187A0A096LP49 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC187A0A096LP49 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC187A0A096LP49 snoU13.30-201ENST00000458951 104 ntBASIC2.79□□□□□ -1.96
CCDC187A0A096LP49 AC146507.2-201ENST00000460608 476 ntBASIC2.79□□□□□ -1.96
CCDC187A0A096LP49 AIG1P1-201ENST00000503376 148 ntBASIC2.79□□□□□ -1.96
CCDC187A0A096LP49 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC187A0A096LP49 RNA5SP112-201ENST00000515937 99 ntBASIC2.79□□□□□ -1.96
CCDC187A0A096LP49 RNA5SP217-201ENST00000515959 91 ntBASIC2.79□□□□□ -1.96
CCDC187A0A096LP49 RNU4-71P-201ENST00000516258 113 ntBASIC2.79□□□□□ -1.96
CCDC187A0A096LP49 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC187A0A096LP49 CBX3P4-201ENST00000538909 354 ntBASIC2.79□□□□□ -1.96
CCDC187A0A096LP49 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.79□□□□□ -1.96
CCDC187A0A096LP49 MIR4643-201ENST00000577473 78 ntBASIC2.79□□□□□ -1.96
CCDC187A0A096LP49 AC103810.1-201ENST00000579873 453 ntBASIC2.79□□□□□ -1.96
CCDC187A0A096LP49 MIR3945-201ENST00000581853 98 ntBASIC2.79□□□□□ -1.96
CCDC187A0A096LP49 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC187A0A096LP49 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC187A0A096LP49 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC187A0A096LP49 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.79□□□□□ -1.96
CCDC187A0A096LP49 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC187A0A096LP49 Z75746.1-201ENST00000440243 2080 ntBASIC2.78□□□□□ -1.96
CCDC187A0A096LP49 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC187A0A096LP49 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC187A0A096LP49 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC187A0A096LP49 RNU4-82P-201ENST00000362443 140 ntBASIC2.78□□□□□ -1.96
CCDC187A0A096LP49 Y_RNA.40-201ENST00000362645 93 ntBASIC2.78□□□□□ -1.96
CCDC187A0A096LP49 SNORD81.1-201ENST00000363064 77 ntBASIC2.78□□□□□ -1.96
CCDC187A0A096LP49 SNORD115-32-201ENST00000364079 82 ntBASIC2.78□□□□□ -1.96
CCDC187A0A096LP49 Y_RNA.405-201ENST00000383979 100 ntBASIC2.78□□□□□ -1.96
CCDC187A0A096LP49 Y_RNA.451-201ENST00000384200 100 ntBASIC2.78□□□□□ -1.96
CCDC187A0A096LP49 RNU6-125P-201ENST00000384505 107 ntBASIC2.78□□□□□ -1.96
CCDC187A0A096LP49 Y_RNA.524-201ENST00000384564 100 ntBASIC2.78□□□□□ -1.96
CCDC187A0A096LP49 Y_RNA.561-201ENST00000384694 100 ntBASIC2.78□□□□□ -1.96
CCDC187A0A096LP49 MIR887-201ENST00000401258 79 ntBASIC2.78□□□□□ -1.96
CCDC187A0A096LP49 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC187A0A096LP49 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC187A0A096LP49 RPS12P18-201ENST00000442381 270 ntBASIC2.78□□□□□ -1.96
CCDC187A0A096LP49 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC187A0A096LP49 AF186996.7-201ENST00000492781 209 ntBASIC2.78□□□□□ -1.96
CCDC187A0A096LP49 RNU6-567P-201ENST00000516746 107 ntBASIC2.78□□□□□ -1.96
CCDC187A0A096LP49 DEFB108E-201ENST00000524692 240 ntBASIC2.78□□□□□ -1.96
CCDC187A0A096LP49 MIR4300-201ENST00000581016 96 ntBASIC2.78□□□□□ -1.96
CCDC187A0A096LP49 MIR3133-201ENST00000583157 78 ntBASIC2.78□□□□□ -1.96
CCDC187A0A096LP49 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC187A0A096LP49 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC187A0A096LP49 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC187A0A096LP49 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
CCDC187A0A096LP49 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
CCDC187A0A096LP49 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC187A0A096LP49 Y_RNA.16-201ENST00000362421 102 ntBASIC2.77□□□□□ -1.97
CCDC187A0A096LP49 RNU6-655P-201ENST00000362858 107 ntBASIC2.77□□□□□ -1.97
CCDC187A0A096LP49 RNU6-486P-201ENST00000363116 107 ntBASIC2.77□□□□□ -1.97
CCDC187A0A096LP49 Y_RNA.270-201ENST00000364693 104 ntBASIC2.77□□□□□ -1.97
CCDC187A0A096LP49 RNU4-56P-201ENST00000364700 142 ntBASIC2.77□□□□□ -1.97
CCDC187A0A096LP49 SNORA51.4-201ENST00000364993 124 ntBASIC2.77□□□□□ -1.97
CCDC187A0A096LP49 RNA5SP274-201ENST00000410484 108 ntBASIC2.77□□□□□ -1.97
CCDC187A0A096LP49 AIMP1P2-201ENST00000425294 312 ntBASIC2.77□□□□□ -1.97
CCDC187A0A096LP49 MTCO3P29-201ENST00000432119 779 ntBASIC2.77□□□□□ -1.97
CCDC187A0A096LP49 AC108938.1-201ENST00000451204 136 ntBASIC2.77□□□□□ -1.97
CCDC187A0A096LP49 AC087477.1-201ENST00000465747 340 ntBASIC2.77□□□□□ -1.97
CCDC187A0A096LP49 AC090525.1-201ENST00000479116 478 ntBASIC2.77□□□□□ -1.97
CCDC187A0A096LP49 RPL23AP70-201ENST00000483361 460 ntBASIC2.77□□□□□ -1.97
CCDC187A0A096LP49 RN7SL20P-201ENST00000488827 297 ntBASIC2.77□□□□□ -1.97
CCDC187A0A096LP49 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC187A0A096LP49 RNU5F-2P-201ENST00000516066 82 ntBASIC2.77□□□□□ -1.97
CCDC187A0A096LP49 RNU6-1338P-201ENST00000516328 91 ntBASIC2.77□□□□□ -1.97
CCDC187A0A096LP49 Y_RNA.683-201ENST00000516508 93 ntBASIC2.77□□□□□ -1.97
CCDC187A0A096LP49 Y_RNA.706-201ENST00000516933 99 ntBASIC2.77□□□□□ -1.97
CCDC187A0A096LP49 Y_RNA.713-201ENST00000517013 96 ntBASIC2.77□□□□□ -1.97
CCDC187A0A096LP49 AC010928.2-201ENST00000588017 287 ntBASIC2.77□□□□□ -1.97
CCDC187A0A096LP49 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC187A0A096LP49 RMST_6.1-201ENST00000611980 203 ntBASIC2.77□□□□□ -1.97
CCDC187A0A096LP49 AC007318.2-201ENST00000620999 243 ntBASIC2.77□□□□□ -1.97
CCDC187A0A096LP49 SNORD98-201ENST00000636377 67 ntBASIC2.77□□□□□ -1.97
CCDC187A0A096LP49 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC187A0A096LP49 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
CCDC187A0A096LP49 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.76□□□□□ -1.97
CCDC187A0A096LP49 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC187A0A096LP49 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.76□□□□□ -1.97
CCDC187A0A096LP49 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
CCDC187A0A096LP49 RNU6-545P-201ENST00000362681 104 ntBASIC2.76□□□□□ -1.97
CCDC187A0A096LP49 RNU6-1266P-201ENST00000362794 105 ntBASIC2.76□□□□□ -1.97
CCDC187A0A096LP49 RNU6-1210P-201ENST00000363775 107 ntBASIC2.76□□□□□ -1.97
CCDC187A0A096LP49 Y_RNA.200-201ENST00000364018 102 ntBASIC2.76□□□□□ -1.97
CCDC187A0A096LP49 RNU6-461P-201ENST00000364195 107 ntBASIC2.76□□□□□ -1.97
CCDC187A0A096LP49 Y_RNA.277-201ENST00000364754 102 ntBASIC2.76□□□□□ -1.97
CCDC187A0A096LP49 RNU6-1180P-201ENST00000364935 107 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms