Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 Y_RNA.287-201ENST00000364853 94 ntBASIC-0.09□□□□□ -2.42
HLA-DRB4X5D2U9 Y_RNA.311-201ENST00000365068 96 ntBASIC-0.09□□□□□ -2.42
HLA-DRB4X5D2U9 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.09□□□□□ -2.42
HLA-DRB4X5D2U9 SNORA40.2-201ENST00000390847 128 ntBASIC-0.09□□□□□ -2.42
HLA-DRB4X5D2U9 RNA5SP63-201ENST00000391225 112 ntBASIC-0.09□□□□□ -2.42
HLA-DRB4X5D2U9 RNA5SP467-201ENST00000391274 118 ntBASIC-0.09□□□□□ -2.42
HLA-DRB4X5D2U9 MIR1283-1-201ENST00000408494 87 ntBASIC-0.09□□□□□ -2.42
HLA-DRB4X5D2U9 AC019070.1-201ENST00000415008 1024 ntBASIC-0.09□□□□□ -2.42
HLA-DRB4X5D2U9 USP9YP11-201ENST00000427537 717 ntBASIC-0.09□□□□□ -2.42
HLA-DRB4X5D2U9 RPL31P35-201ENST00000431058 377 ntBASIC-0.09□□□□□ -2.42
HLA-DRB4X5D2U9 AC104332.1-201ENST00000440471 797 ntBASIC-0.09□□□□□ -2.42
HLA-DRB4X5D2U9 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.09□□□□□ -2.42
HLA-DRB4X5D2U9 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC-0.09□□□□□ -2.42
HLA-DRB4X5D2U9 ADI1P3-201ENST00000549509 470 ntBASIC-0.09□□□□□ -2.42
HLA-DRB4X5D2U9 AC005730.3-201ENST00000583067 366 ntBASIC-0.09□□□□□ -2.42
HLA-DRB4X5D2U9 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.09□□□□□ -2.42
HLA-DRB4X5D2U9 MIR4753-201ENST00000585119 83 ntBASIC-0.09□□□□□ -2.42
HLA-DRB4X5D2U9 AC078795.3-201ENST00000602913 472 ntBASIC-0.09□□□□□ -2.42
HLA-DRB4X5D2U9 AL596327.1-201ENST00000603629 213 ntBASIC-0.09□□□□□ -2.42
HLA-DRB4X5D2U9 SNRPGP20-201ENST00000604477 205 ntBASIC-0.09□□□□□ -2.42
HLA-DRB4X5D2U9 MIR8087-201ENST00000612745 78 ntBASIC-0.09□□□□□ -2.42
HLA-DRB4X5D2U9 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-0.09□□□□□ -2.42
HLA-DRB4X5D2U9 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.1□□□□□ -2.43
HLA-DRB4X5D2U9 RNU4-41P-201ENST00000364426 143 ntBASIC-0.1□□□□□ -2.43
HLA-DRB4X5D2U9 SNORA2.2-201ENST00000365473 135 ntBASIC-0.1□□□□□ -2.43
HLA-DRB4X5D2U9 RNU6-440P-201ENST00000390882 105 ntBASIC-0.1□□□□□ -2.43
HLA-DRB4X5D2U9 SNORA26.3-201ENST00000391119 136 ntBASIC-0.1□□□□□ -2.43
HLA-DRB4X5D2U9 MTCYBP10-201ENST00000424905 650 ntBASIC-0.1□□□□□ -2.43
HLA-DRB4X5D2U9 AL358176.2-201ENST00000425769 204 ntBASIC-0.1□□□□□ -2.43
HLA-DRB4X5D2U9 SNRPGP12-201ENST00000449481 213 ntBASIC-0.1□□□□□ -2.43
HLA-DRB4X5D2U9 ZNF736P5Y-201ENST00000451173 805 ntBASIC-0.1□□□□□ -2.43
HLA-DRB4X5D2U9 AC067940.1-201ENST00000458411 300 ntBASIC-0.1□□□□□ -2.43
HLA-DRB4X5D2U9 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.1□□□□□ -2.43
HLA-DRB4X5D2U9 OR9P1P-201ENST00000496431 281 ntBASIC-0.1□□□□□ -2.43
HLA-DRB4X5D2U9 RNU6-948P-201ENST00000516374 107 ntBASIC-0.1□□□□□ -2.43
HLA-DRB4X5D2U9 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-0.1□□□□□ -2.43
HLA-DRB4X5D2U9 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.1□□□□□ -2.43
HLA-DRB4X5D2U9 AC004223.2-201ENST00000590309 544 ntBASIC-0.1□□□□□ -2.43
HLA-DRB4X5D2U9 AC146944.4-201ENST00000602697 718 ntBASIC-0.1□□□□□ -2.43
HLA-DRB4X5D2U9 AL162730.1-201ENST00000605734 292 ntBASIC-0.1□□□□□ -2.43
HLA-DRB4X5D2U9 AC009994.1-201ENST00000606889 253 ntBASIC-0.1□□□□□ -2.43
HLA-DRB4X5D2U9 AP000484.1-201ENST00000620067 1252 ntBASIC-0.1□□□□□ -2.43
HLA-DRB4X5D2U9 OR5AK4P-201ENST00000635912 903 ntBASIC-0.1□□□□□ -2.43
HLA-DRB4X5D2U9 RNU6-692P-201ENST00000384496 107 ntBASIC-0.11□□□□□ -2.43
HLA-DRB4X5D2U9 RNU6-293P-201ENST00000411259 106 ntBASIC-0.11□□□□□ -2.43
HLA-DRB4X5D2U9 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.11□□□□□ -2.43
HLA-DRB4X5D2U9 AC245047.3-201ENST00000429428 127 ntBASIC-0.11□□□□□ -2.43
HLA-DRB4X5D2U9 AL117351.1-201ENST00000438864 766 ntBASIC-0.11□□□□□ -2.43
HLA-DRB4X5D2U9 MTCO1P19-201ENST00000443487 500 ntBASIC-0.11□□□□□ -2.43
HLA-DRB4X5D2U9 LINC01399-202ENST00000458450 244 ntBASIC-0.11□□□□□ -2.43
HLA-DRB4X5D2U9 RBBP4P6-201ENST00000508098 202 ntBASIC-0.11□□□□□ -2.43
HLA-DRB4X5D2U9 AC025465.4-201ENST00000513422 638 ntBASIC-0.11□□□□□ -2.43
HLA-DRB4X5D2U9 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC-0.11□□□□□ -2.43
HLA-DRB4X5D2U9 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.11□□□□□ -2.43
HLA-DRB4X5D2U9 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.11□□□□□ -2.43
HLA-DRB4X5D2U9 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.11□□□□□ -2.43
HLA-DRB4X5D2U9 MIR5697-201ENST00000578045 78 ntBASIC-0.11□□□□□ -2.43
HLA-DRB4X5D2U9 MIR5190-201ENST00000581537 80 ntBASIC-0.11□□□□□ -2.43
HLA-DRB4X5D2U9 BNIP3P26-201ENST00000600827 554 ntBASIC-0.11□□□□□ -2.43
HLA-DRB4X5D2U9 AC234772.3-201ENST00000602277 528 ntBASIC-0.11□□□□□ -2.43
HLA-DRB4X5D2U9 AC091805.2-201ENST00000603848 235 ntBASIC-0.11□□□□□ -2.43
HLA-DRB4X5D2U9 AC144521.1-201ENST00000607148 956 ntBASIC-0.11□□□□□ -2.43
HLA-DRB4X5D2U9 AC004832.4-201ENST00000608952 331 ntBASIC-0.11□□□□□ -2.43
HLA-DRB4X5D2U9 AL096861.1-201ENST00000610899 123 ntBASIC-0.11□□□□□ -2.43
HLA-DRB4X5D2U9 Y_RNA.192-201ENST00000363977 102 ntBASIC-0.12□□□□□ -2.43
HLA-DRB4X5D2U9 RNU6-769P-201ENST00000384407 104 ntBASIC-0.12□□□□□ -2.43
HLA-DRB4X5D2U9 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
HLA-DRB4X5D2U9 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
HLA-DRB4X5D2U9 MRPL42P3-201ENST00000401492 326 ntBASIC-0.12□□□□□ -2.43
HLA-DRB4X5D2U9 MIR1253-201ENST00000408273 105 ntBASIC-0.12□□□□□ -2.43
HLA-DRB4X5D2U9 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.12□□□□□ -2.43
HLA-DRB4X5D2U9 MTCO2P34-201ENST00000421994 607 ntBASIC-0.12□□□□□ -2.43
HLA-DRB4X5D2U9 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.12□□□□□ -2.43
HLA-DRB4X5D2U9 MTATP6P9-201ENST00000515039 680 ntBASIC-0.12□□□□□ -2.43
HLA-DRB4X5D2U9 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.12□□□□□ -2.43
HLA-DRB4X5D2U9 RNU6-1069P-201ENST00000516612 133 ntBASIC-0.12□□□□□ -2.43
HLA-DRB4X5D2U9 RNU1-142P-201ENST00000516682 145 ntBASIC-0.12□□□□□ -2.43
HLA-DRB4X5D2U9 AC022868.1-201ENST00000517767 391 ntBASIC-0.12□□□□□ -2.43
HLA-DRB4X5D2U9 AC026616.1-201ENST00000523157 525 ntBASIC-0.12□□□□□ -2.43
HLA-DRB4X5D2U9 AC104458.1-201ENST00000608243 463 ntBASIC-0.12□□□□□ -2.43
HLA-DRB4X5D2U9 AC097478.2-201ENST00000610572 514 ntBASIC-0.12□□□□□ -2.43
HLA-DRB4X5D2U9 AC012409.4-201ENST00000612923 249 ntBASIC-0.12□□□□□ -2.43
HLA-DRB4X5D2U9 AC008133.2-201ENST00000624540 351 ntBASIC-0.12□□□□□ -2.43
HLA-DRB4X5D2U9 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.12□□□□□ -2.43
HLA-DRB4X5D2U9 MIR4315-1-201ENST00000636800 73 ntBASIC-0.12□□□□□ -2.43
HLA-DRB4X5D2U9 MIR4315-2-201ENST00000640925 73 ntBASIC-0.12□□□□□ -2.43
HLA-DRB4X5D2U9 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC-0.13□□□□□ -2.43
HLA-DRB4X5D2U9 AC073544.1-201ENST00000600110 1595 ntBASIC-0.13□□□□□ -2.43
HLA-DRB4X5D2U9 RNU6-562P-201ENST00000362731 107 ntBASIC-0.13□□□□□ -2.43
HLA-DRB4X5D2U9 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.13□□□□□ -2.43
HLA-DRB4X5D2U9 SNORD105-201ENST00000386910 85 ntBASIC-0.13□□□□□ -2.43
HLA-DRB4X5D2U9 TRIM60P10Y-201ENST00000425589 751 ntBASIC-0.13□□□□□ -2.43
HLA-DRB4X5D2U9 RPL17P35-201ENST00000432217 549 ntBASIC-0.13□□□□□ -2.43
HLA-DRB4X5D2U9 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.13□□□□□ -2.43
HLA-DRB4X5D2U9 AC016717.1-201ENST00000448918 286 ntBASIC-0.13□□□□□ -2.43
HLA-DRB4X5D2U9 snoU13.25-201ENST00000458945 104 ntBASIC-0.13□□□□□ -2.43
HLA-DRB4X5D2U9 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-0.13□□□□□ -2.43
HLA-DRB4X5D2U9 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-0.13□□□□□ -2.43
HLA-DRB4X5D2U9 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-0.13□□□□□ -2.43
HLA-DRB4X5D2U9 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms