Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 MIR320B2-201ENST00000408479 138 ntBASIC3.4□□□□□ -1.87
PCDHA2Q9Y5H9 RPS27P29-201ENST00000463110 252 ntBASIC3.4□□□□□ -1.87
PCDHA2Q9Y5H9 RPL23AP70-201ENST00000483361 460 ntBASIC3.4□□□□□ -1.87
PCDHA2Q9Y5H9 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.4□□□□□ -1.87
PCDHA2Q9Y5H9 AC018448.1-201ENST00000552843 316 ntBASIC3.4□□□□□ -1.87
PCDHA2Q9Y5H9 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDHA2Q9Y5H9 AC008749.1-201ENST00000597650 306 ntBASIC3.4□□□□□ -1.87
PCDHA2Q9Y5H9 SNRPGP20-201ENST00000604477 205 ntBASIC3.4□□□□□ -1.87
PCDHA2Q9Y5H9 AC022441.3-201ENST00000605737 136 ntBASIC3.4□□□□□ -1.87
PCDHA2Q9Y5H9 AC037487.3-201ENST00000606668 112 ntBASIC3.4□□□□□ -1.87
PCDHA2Q9Y5H9 uc_338.14-201ENST00000613162 166 ntBASIC3.4□□□□□ -1.87
PCDHA2Q9Y5H9 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
PCDHA2Q9Y5H9 AC000403.1-201ENST00000613696 3585 ntBASIC3.4□□□□□ -1.87
PCDHA2Q9Y5H9 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.4□□□□□ -1.87
PCDHA2Q9Y5H9 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
PCDHA2Q9Y5H9 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.39□□□□□ -1.87
PCDHA2Q9Y5H9 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
PCDHA2Q9Y5H9 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHA2Q9Y5H9 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHA2Q9Y5H9 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
PCDHA2Q9Y5H9 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
PCDHA2Q9Y5H9 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.39□□□□□ -1.87
PCDHA2Q9Y5H9 Y_RNA.29-201ENST00000362570 113 ntBASIC3.39□□□□□ -1.87
PCDHA2Q9Y5H9 RNU4-15P-201ENST00000362613 141 ntBASIC3.39□□□□□ -1.87
PCDHA2Q9Y5H9 Y_RNA.446-201ENST00000384178 104 ntBASIC3.39□□□□□ -1.87
PCDHA2Q9Y5H9 Y_RNA.510-201ENST00000384511 114 ntBASIC3.39□□□□□ -1.87
PCDHA2Q9Y5H9 MIR186-201ENST00000384988 86 ntBASIC3.39□□□□□ -1.87
PCDHA2Q9Y5H9 RPL21P3-201ENST00000395517 478 ntBASIC3.39□□□□□ -1.87
PCDHA2Q9Y5H9 MIR1298-201ENST00000408783 112 ntBASIC3.39□□□□□ -1.87
PCDHA2Q9Y5H9 RPL23AP36-201ENST00000413895 458 ntBASIC3.39□□□□□ -1.87
PCDHA2Q9Y5H9 PIGPP3-201ENST00000425307 415 ntBASIC3.39□□□□□ -1.87
PCDHA2Q9Y5H9 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.39□□□□□ -1.87
PCDHA2Q9Y5H9 UQCRBP2-201ENST00000447827 297 ntBASIC3.39□□□□□ -1.87
PCDHA2Q9Y5H9 RNU6-625P-201ENST00000459412 107 ntBASIC3.39□□□□□ -1.87
PCDHA2Q9Y5H9 AC146507.2-201ENST00000460608 476 ntBASIC3.39□□□□□ -1.87
PCDHA2Q9Y5H9 AL049830.2-201ENST00000480072 201 ntBASIC3.39□□□□□ -1.87
PCDHA2Q9Y5H9 AC103975.1-201ENST00000482506 483 ntBASIC3.39□□□□□ -1.87
PCDHA2Q9Y5H9 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.39□□□□□ -1.87
PCDHA2Q9Y5H9 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.39□□□□□ -1.87
PCDHA2Q9Y5H9 AC245166.1-201ENST00000521012 253 ntBASIC3.39□□□□□ -1.87
PCDHA2Q9Y5H9 AC055872.1-201ENST00000570978 278 ntBASIC3.39□□□□□ -1.87
PCDHA2Q9Y5H9 MIR4474-201ENST00000579189 78 ntBASIC3.39□□□□□ -1.87
PCDHA2Q9Y5H9 MIR5047-201ENST00000579212 100 ntBASIC3.39□□□□□ -1.87
PCDHA2Q9Y5H9 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.39□□□□□ -1.87
PCDHA2Q9Y5H9 AL590240.4-201ENST00000616908 390 ntBASIC3.39□□□□□ -1.87
PCDHA2Q9Y5H9 AL137790.1-201ENST00000634283 177 ntBASIC3.39□□□□□ -1.87
PCDHA2Q9Y5H9 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.39□□□□□ -1.87
PCDHA2Q9Y5H9 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHA2Q9Y5H9 AC093831.2-201ENST00000624393 3427 ntBASIC3.38□□□□□ -1.87
PCDHA2Q9Y5H9 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHA2Q9Y5H9 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.38□□□□□ -1.87
PCDHA2Q9Y5H9 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
PCDHA2Q9Y5H9 Y_RNA.76-201ENST00000362931 109 ntBASIC3.38□□□□□ -1.87
PCDHA2Q9Y5H9 Y_RNA.136-201ENST00000363444 102 ntBASIC3.38□□□□□ -1.87
PCDHA2Q9Y5H9 RNU6-1210P-201ENST00000363775 107 ntBASIC3.38□□□□□ -1.87
PCDHA2Q9Y5H9 Y_RNA.331-201ENST00000365267 102 ntBASIC3.38□□□□□ -1.87
PCDHA2Q9Y5H9 AL512633.1-201ENST00000399931 655 ntBASIC3.38□□□□□ -1.87
PCDHA2Q9Y5H9 ELOCP21-201ENST00000412558 336 ntBASIC3.38□□□□□ -1.87
PCDHA2Q9Y5H9 SETP5-201ENST00000437270 562 ntBASIC3.38□□□□□ -1.87
PCDHA2Q9Y5H9 IFNA11P-201ENST00000446352 526 ntBASIC3.38□□□□□ -1.87
PCDHA2Q9Y5H9 AL121594.1-201ENST00000475906 575 ntBASIC3.38□□□□□ -1.87
PCDHA2Q9Y5H9 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.38□□□□□ -1.87
PCDHA2Q9Y5H9 AC079598.5-201ENST00000547460 117 ntBASIC3.38□□□□□ -1.87
PCDHA2Q9Y5H9 EIF4A1P12-201ENST00000551910 141 ntBASIC3.38□□□□□ -1.87
PCDHA2Q9Y5H9 AC007318.2-201ENST00000620999 243 ntBASIC3.38□□□□□ -1.87
PCDHA2Q9Y5H9 AC006001.4-201ENST00000622243 395 ntBASIC3.38□□□□□ -1.87
PCDHA2Q9Y5H9 IGHVIII-44-202ENST00000636235 289 ntBASIC3.38□□□□□ -1.87
PCDHA2Q9Y5H9 U6.98-201ENST00000637157 84 ntBASIC3.38□□□□□ -1.87
PCDHA2Q9Y5H9 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
PCDHA2Q9Y5H9 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHA2Q9Y5H9 MIR410-201ENST00000362222 80 ntBASIC3.37□□□□□ -1.87
PCDHA2Q9Y5H9 SNORA25.1-201ENST00000362326 128 ntBASIC3.37□□□□□ -1.87
PCDHA2Q9Y5H9 RNU6-655P-201ENST00000362858 107 ntBASIC3.37□□□□□ -1.87
PCDHA2Q9Y5H9 SNORA14A-201ENST00000364773 135 ntBASIC3.37□□□□□ -1.87
PCDHA2Q9Y5H9 SNORA18.3-201ENST00000384122 132 ntBASIC3.37□□□□□ -1.87
PCDHA2Q9Y5H9 Y_RNA.498-201ENST00000384460 102 ntBASIC3.37□□□□□ -1.87
PCDHA2Q9Y5H9 RNU1-57P-201ENST00000384491 166 ntBASIC3.37□□□□□ -1.87
PCDHA2Q9Y5H9 Y_RNA.555-201ENST00000384673 110 ntBASIC3.37□□□□□ -1.87
PCDHA2Q9Y5H9 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.37□□□□□ -1.87
PCDHA2Q9Y5H9 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHA2Q9Y5H9 SUMO1P3-201ENST00000439961 304 ntBASIC3.37□□□□□ -1.87
PCDHA2Q9Y5H9 AL138752.1-201ENST00000452964 351 ntBASIC3.37□□□□□ -1.87
PCDHA2Q9Y5H9 RPS3P1-201ENST00000456781 192 ntBASIC3.37□□□□□ -1.87
PCDHA2Q9Y5H9 RN7SL75P-201ENST00000461926 281 ntBASIC3.37□□□□□ -1.87
PCDHA2Q9Y5H9 RPL36AP48-201ENST00000485521 314 ntBASIC3.37□□□□□ -1.87
PCDHA2Q9Y5H9 AC004792.1-201ENST00000614523 137 ntBASIC3.37□□□□□ -1.87
PCDHA2Q9Y5H9 FTX_2.1-201ENST00000618816 94 ntBASIC3.37□□□□□ -1.87
PCDHA2Q9Y5H9 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.37□□□□□ -1.87
PCDHA2Q9Y5H9 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHA2Q9Y5H9 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.37□□□□□ -1.87
PCDHA2Q9Y5H9 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHA2Q9Y5H9 Y_RNA.83-201ENST00000363005 113 ntBASIC3.36□□□□□ -1.87
PCDHA2Q9Y5H9 RNU1-105P-201ENST00000363470 161 ntBASIC3.36□□□□□ -1.87
PCDHA2Q9Y5H9 RNU6-740P-201ENST00000364734 105 ntBASIC3.36□□□□□ -1.87
PCDHA2Q9Y5H9 RNU6-1062P-201ENST00000383908 107 ntBASIC3.36□□□□□ -1.87
PCDHA2Q9Y5H9 RPL19P1-201ENST00000411635 428 ntBASIC3.36□□□□□ -1.87
PCDHA2Q9Y5H9 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDHA2Q9Y5H9 RAB28P5-201ENST00000427490 651 ntBASIC3.36□□□□□ -1.87
PCDHA2Q9Y5H9 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDHA2Q9Y5H9 AC025750.2-201ENST00000442609 450 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms