Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC131281.1-201ENST00000522984 164 ntBASIC2.91□□□□□ -1.94
PCDHA3Q9Y5H8 AC093023.1-201ENST00000547375 507 ntBASIC2.91□□□□□ -1.94
PCDHA3Q9Y5H8 AC007336.1-201ENST00000576365 3828 ntBASIC2.91□□□□□ -1.94
PCDHA3Q9Y5H8 U6.92-201ENST00000636464 89 ntBASIC2.91□□□□□ -1.94
PCDHA3Q9Y5H8 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.91□□□□□ -1.94
PCDHA3Q9Y5H8 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.94
PCDHA3Q9Y5H8 Y_RNA.458-201ENST00000384240 102 ntBASIC2.9□□□□□ -1.95
PCDHA3Q9Y5H8 Y_RNA.471-201ENST00000384312 102 ntBASIC2.9□□□□□ -1.95
PCDHA3Q9Y5H8 SNORD78.2-201ENST00000391076 69 ntBASIC2.9□□□□□ -1.95
PCDHA3Q9Y5H8 AC022018.1-201ENST00000430685 241 ntBASIC2.9□□□□□ -1.95
PCDHA3Q9Y5H8 RPL39P40-201ENST00000445481 146 ntBASIC2.9□□□□□ -1.95
PCDHA3Q9Y5H8 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.9□□□□□ -1.95
PCDHA3Q9Y5H8 AC023141.11-201ENST00000508864 202 ntBASIC2.9□□□□□ -1.95
PCDHA3Q9Y5H8 SNORA25.14-201ENST00000516481 132 ntBASIC2.9□□□□□ -1.95
PCDHA3Q9Y5H8 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.9□□□□□ -1.95
PCDHA3Q9Y5H8 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PCDHA3Q9Y5H8 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PCDHA3Q9Y5H8 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.9□□□□□ -1.95
PCDHA3Q9Y5H8 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.9□□□□□ -1.95
PCDHA3Q9Y5H8 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
PCDHA3Q9Y5H8 RNU1-62P-201ENST00000362599 164 ntBASIC2.89□□□□□ -1.95
PCDHA3Q9Y5H8 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.89□□□□□ -1.95
PCDHA3Q9Y5H8 RNU6-611P-201ENST00000384276 104 ntBASIC2.89□□□□□ -1.95
PCDHA3Q9Y5H8 RNU6-1109P-201ENST00000391187 107 ntBASIC2.89□□□□□ -1.95
PCDHA3Q9Y5H8 AL513477.1-202ENST00000417061 214 ntBASIC2.89□□□□□ -1.95
PCDHA3Q9Y5H8 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.89□□□□□ -1.95
PCDHA3Q9Y5H8 CBX3P6-201ENST00000430257 527 ntBASIC2.89□□□□□ -1.95
PCDHA3Q9Y5H8 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.89□□□□□ -1.95
PCDHA3Q9Y5H8 RPEP5-201ENST00000441137 268 ntBASIC2.89□□□□□ -1.95
PCDHA3Q9Y5H8 MTATP8P1-201ENST00000467115 207 ntBASIC2.89□□□□□ -1.95
PCDHA3Q9Y5H8 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.89□□□□□ -1.95
PCDHA3Q9Y5H8 MRPS35P2-201ENST00000508242 191 ntBASIC2.89□□□□□ -1.95
PCDHA3Q9Y5H8 AC067942.3-201ENST00000512025 362 ntBASIC2.89□□□□□ -1.95
PCDHA3Q9Y5H8 MTCO2P24-201ENST00000515611 426 ntBASIC2.89□□□□□ -1.95
PCDHA3Q9Y5H8 RNA5SP341-201ENST00000516261 117 ntBASIC2.89□□□□□ -1.95
PCDHA3Q9Y5H8 Y_RNA.713-201ENST00000517013 96 ntBASIC2.89□□□□□ -1.95
PCDHA3Q9Y5H8 CYCSP23-201ENST00000519781 313 ntBASIC2.89□□□□□ -1.95
PCDHA3Q9Y5H8 AC008269.2-201ENST00000561915 1105 ntBASIC2.89□□□□□ -1.95
PCDHA3Q9Y5H8 AC010999.1-201ENST00000611856 324 ntBASIC2.89□□□□□ -1.95
PCDHA3Q9Y5H8 TCL6_2.1-201ENST00000615162 119 ntBASIC2.89□□□□□ -1.95
PCDHA3Q9Y5H8 MIR5739-201ENST00000619803 80 ntBASIC2.89□□□□□ -1.95
PCDHA3Q9Y5H8 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.89□□□□□ -1.95
PCDHA3Q9Y5H8 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.89□□□□□ -1.95
PCDHA3Q9Y5H8 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.88□□□□□ -1.95
PCDHA3Q9Y5H8 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
PCDHA3Q9Y5H8 AL161431.1-201ENST00000618966 4205 ntBASIC2.88□□□□□ -1.95
PCDHA3Q9Y5H8 RNU6-461P-201ENST00000364195 107 ntBASIC2.88□□□□□ -1.95
PCDHA3Q9Y5H8 MIR95-201ENST00000385072 81 ntBASIC2.88□□□□□ -1.95
PCDHA3Q9Y5H8 MRPL35P1-201ENST00000404272 572 ntBASIC2.88□□□□□ -1.95
PCDHA3Q9Y5H8 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.88□□□□□ -1.95
PCDHA3Q9Y5H8 RNU6-586P-201ENST00000517265 104 ntBASIC2.88□□□□□ -1.95
PCDHA3Q9Y5H8 AC018630.3-201ENST00000542637 96 ntBASIC2.88□□□□□ -1.95
PCDHA3Q9Y5H8 RAC1P9-201ENST00000604990 392 ntBASIC2.88□□□□□ -1.95
PCDHA3Q9Y5H8 AC240442.1-201ENST00000616055 283 ntBASIC2.88□□□□□ -1.95
PCDHA3Q9Y5H8 AC005562.2-201ENST00000618264 111 ntBASIC2.88□□□□□ -1.95
PCDHA3Q9Y5H8 AC090517.3-201ENST00000625170 141 ntBASIC2.88□□□□□ -1.95
PCDHA3Q9Y5H8 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.87□□□□□ -1.95
PCDHA3Q9Y5H8 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PCDHA3Q9Y5H8 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.87□□□□□ -1.95
PCDHA3Q9Y5H8 RNA5SP361-201ENST00000362686 118 ntBASIC2.87□□□□□ -1.95
PCDHA3Q9Y5H8 Y_RNA.149-201ENST00000363558 117 ntBASIC2.87□□□□□ -1.95
PCDHA3Q9Y5H8 Y_RNA.176-201ENST00000363815 109 ntBASIC2.87□□□□□ -1.95
PCDHA3Q9Y5H8 Y_RNA.179-201ENST00000363844 90 ntBASIC2.87□□□□□ -1.95
PCDHA3Q9Y5H8 Y_RNA.210-201ENST00000364161 110 ntBASIC2.87□□□□□ -1.95
PCDHA3Q9Y5H8 RNU6-1274P-201ENST00000384557 107 ntBASIC2.87□□□□□ -1.95
PCDHA3Q9Y5H8 RPL21P1-201ENST00000399532 476 ntBASIC2.87□□□□□ -1.95
PCDHA3Q9Y5H8 SNORD12B-201ENST00000410433 91 ntBASIC2.87□□□□□ -1.95
PCDHA3Q9Y5H8 Y_RNA.597-201ENST00000410463 100 ntBASIC2.87□□□□□ -1.95
PCDHA3Q9Y5H8 RNU6-1001P-201ENST00000411265 100 ntBASIC2.87□□□□□ -1.95
PCDHA3Q9Y5H8 MTCYBP9-201ENST00000431021 303 ntBASIC2.87□□□□□ -1.95
PCDHA3Q9Y5H8 AL445305.1-201ENST00000432577 575 ntBASIC2.87□□□□□ -1.95
PCDHA3Q9Y5H8 EEF1B2P7-201ENST00000451177 676 ntBASIC2.87□□□□□ -1.95
PCDHA3Q9Y5H8 AC007395.1-201ENST00000451333 677 ntBASIC2.87□□□□□ -1.95
PCDHA3Q9Y5H8 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.87□□□□□ -1.95
PCDHA3Q9Y5H8 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.87□□□□□ -1.95
PCDHA3Q9Y5H8 RPS29P26-201ENST00000477483 171 ntBASIC2.87□□□□□ -1.95
PCDHA3Q9Y5H8 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.87□□□□□ -1.95
PCDHA3Q9Y5H8 HSPE1P18-201ENST00000517602 280 ntBASIC2.87□□□□□ -1.95
PCDHA3Q9Y5H8 AC090517.1-201ENST00000569307 266 ntBASIC2.87□□□□□ -1.95
PCDHA3Q9Y5H8 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.87□□□□□ -1.95
PCDHA3Q9Y5H8 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.87□□□□□ -1.95
PCDHA3Q9Y5H8 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.87□□□□□ -1.95
PCDHA3Q9Y5H8 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
PCDHA3Q9Y5H8 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
PCDHA3Q9Y5H8 AC080100.1-201ENST00000624239 5356 ntBASIC2.87□□□□□ -1.95
PCDHA3Q9Y5H8 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PCDHA3Q9Y5H8 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
PCDHA3Q9Y5H8 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.86□□□□□ -1.95
PCDHA3Q9Y5H8 Y_RNA.183-201ENST00000363882 113 ntBASIC2.86□□□□□ -1.95
PCDHA3Q9Y5H8 Y_RNA.214-201ENST00000364201 112 ntBASIC2.86□□□□□ -1.95
PCDHA3Q9Y5H8 SNORA18.3-201ENST00000384122 132 ntBASIC2.86□□□□□ -1.95
PCDHA3Q9Y5H8 RNU6-793P-201ENST00000384233 104 ntBASIC2.86□□□□□ -1.95
PCDHA3Q9Y5H8 Y_RNA.574-201ENST00000384766 95 ntBASIC2.86□□□□□ -1.95
PCDHA3Q9Y5H8 MIR549A-201ENST00000385268 96 ntBASIC2.86□□□□□ -1.95
PCDHA3Q9Y5H8 SNORA12-201ENST00000391162 147 ntBASIC2.86□□□□□ -1.95
PCDHA3Q9Y5H8 AC027124.2-201ENST00000428249 105 ntBASIC2.86□□□□□ -1.95
PCDHA3Q9Y5H8 AL139132.1-201ENST00000431587 344 ntBASIC2.86□□□□□ -1.95
PCDHA3Q9Y5H8 CYP2C59P-201ENST00000457790 269 ntBASIC2.86□□□□□ -1.95
PCDHA3Q9Y5H8 AC090515.1-201ENST00000465295 476 ntBASIC2.86□□□□□ -1.95
PCDHA3Q9Y5H8 RNU6-1143P-201ENST00000516125 104 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms