Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 MTND5P35-201ENST00000557537 1720 ntBASIC2.94□□□□□ -1.94
PCDHGA9Q9Y5G4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PCDHGA9Q9Y5G4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
PCDHGA9Q9Y5G4 RNU6-318P-201ENST00000384283 103 ntBASIC2.94□□□□□ -1.94
PCDHGA9Q9Y5G4 SNORA12-201ENST00000391162 147 ntBASIC2.94□□□□□ -1.94
PCDHGA9Q9Y5G4 MIR300-201ENST00000401138 83 ntBASIC2.94□□□□□ -1.94
PCDHGA9Q9Y5G4 MIR887-201ENST00000401258 79 ntBASIC2.94□□□□□ -1.94
PCDHGA9Q9Y5G4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PCDHGA9Q9Y5G4 SNORD12B-201ENST00000410433 91 ntBASIC2.94□□□□□ -1.94
PCDHGA9Q9Y5G4 AC113618.1-201ENST00000416747 285 ntBASIC2.94□□□□□ -1.94
PCDHGA9Q9Y5G4 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.94□□□□□ -1.94
PCDHGA9Q9Y5G4 ARL5AP4-201ENST00000430731 512 ntBASIC2.94□□□□□ -1.94
PCDHGA9Q9Y5G4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.94□□□□□ -1.94
PCDHGA9Q9Y5G4 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.94□□□□□ -1.94
PCDHGA9Q9Y5G4 AC008885.1-201ENST00000514930 301 ntBASIC2.94□□□□□ -1.94
PCDHGA9Q9Y5G4 RN7SKP40-201ENST00000517211 242 ntBASIC2.94□□□□□ -1.94
PCDHGA9Q9Y5G4 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.94□□□□□ -1.94
PCDHGA9Q9Y5G4 AC023824.2-201ENST00000566185 400 ntBASIC2.94□□□□□ -1.94
PCDHGA9Q9Y5G4 PRR13P7-201ENST00000605538 430 ntBASIC2.94□□□□□ -1.94
PCDHGA9Q9Y5G4 AL162730.1-201ENST00000605734 292 ntBASIC2.94□□□□□ -1.94
PCDHGA9Q9Y5G4 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.94□□□□□ -1.94
PCDHGA9Q9Y5G4 AL137790.1-201ENST00000634283 177 ntBASIC2.94□□□□□ -1.94
PCDHGA9Q9Y5G4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
PCDHGA9Q9Y5G4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PCDHGA9Q9Y5G4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
PCDHGA9Q9Y5G4 SNORD56.5-201ENST00000364281 72 ntBASIC2.93□□□□□ -1.94
PCDHGA9Q9Y5G4 Y_RNA.439-201ENST00000384119 94 ntBASIC2.93□□□□□ -1.94
PCDHGA9Q9Y5G4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.93□□□□□ -1.94
PCDHGA9Q9Y5G4 RNU2-32P-201ENST00000411193 191 ntBASIC2.93□□□□□ -1.94
PCDHGA9Q9Y5G4 RNU6-1001P-201ENST00000411265 100 ntBASIC2.93□□□□□ -1.94
PCDHGA9Q9Y5G4 AL139281.1-201ENST00000422120 335 ntBASIC2.93□□□□□ -1.94
PCDHGA9Q9Y5G4 DPH3P2-201ENST00000422618 250 ntBASIC2.93□□□□□ -1.94
PCDHGA9Q9Y5G4 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.93□□□□□ -1.94
PCDHGA9Q9Y5G4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.93□□□□□ -1.94
PCDHGA9Q9Y5G4 AC025750.2-201ENST00000442609 450 ntBASIC2.93□□□□□ -1.94
PCDHGA9Q9Y5G4 AC010095.1-201ENST00000443543 144 ntBASIC2.93□□□□□ -1.94
PCDHGA9Q9Y5G4 UBBP3-201ENST00000445497 241 ntBASIC2.93□□□□□ -1.94
PCDHGA9Q9Y5G4 AC074290.1-201ENST00000448883 135 ntBASIC2.93□□□□□ -1.94
PCDHGA9Q9Y5G4 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.93□□□□□ -1.94
PCDHGA9Q9Y5G4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.93□□□□□ -1.94
PCDHGA9Q9Y5G4 RPL12P50-201ENST00000603116 116 ntBASIC2.93□□□□□ -1.94
PCDHGA9Q9Y5G4 AC006023.1-201ENST00000603944 259 ntBASIC2.93□□□□□ -1.94
PCDHGA9Q9Y5G4 AL033523.1-201ENST00000605153 153 ntBASIC2.93□□□□□ -1.94
PCDHGA9Q9Y5G4 U6.92-201ENST00000636464 89 ntBASIC2.93□□□□□ -1.94
PCDHGA9Q9Y5G4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PCDHGA9Q9Y5G4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
PCDHGA9Q9Y5G4 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PCDHGA9Q9Y5G4 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.92□□□□□ -1.94
PCDHGA9Q9Y5G4 RNU6-944P-201ENST00000364023 107 ntBASIC2.92□□□□□ -1.94
PCDHGA9Q9Y5G4 SNORA71.1-201ENST00000364523 117 ntBASIC2.92□□□□□ -1.94
PCDHGA9Q9Y5G4 RNU6-450P-201ENST00000364654 107 ntBASIC2.92□□□□□ -1.94
PCDHGA9Q9Y5G4 RNU6-234P-201ENST00000365229 104 ntBASIC2.92□□□□□ -1.94
PCDHGA9Q9Y5G4 U8.9-201ENST00000365667 134 ntBASIC2.92□□□□□ -1.94
PCDHGA9Q9Y5G4 RNU6-611P-201ENST00000384276 104 ntBASIC2.92□□□□□ -1.94
PCDHGA9Q9Y5G4 RNU6-1026P-201ENST00000384465 108 ntBASIC2.92□□□□□ -1.94
PCDHGA9Q9Y5G4 SNORA26.7-201ENST00000391288 122 ntBASIC2.92□□□□□ -1.94
PCDHGA9Q9Y5G4 RPL21P3-201ENST00000395517 478 ntBASIC2.92□□□□□ -1.94
PCDHGA9Q9Y5G4 RNA5SP229-201ENST00000410809 99 ntBASIC2.92□□□□□ -1.94
PCDHGA9Q9Y5G4 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.92□□□□□ -1.94
PCDHGA9Q9Y5G4 RNA5SP217-201ENST00000515959 91 ntBASIC2.92□□□□□ -1.94
PCDHGA9Q9Y5G4 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.92□□□□□ -1.94
PCDHGA9Q9Y5G4 AC007536.1-201ENST00000533382 349 ntBASIC2.92□□□□□ -1.94
PCDHGA9Q9Y5G4 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.92□□□□□ -1.94
PCDHGA9Q9Y5G4 MIR4659A-201ENST00000580269 81 ntBASIC2.92□□□□□ -1.94
PCDHGA9Q9Y5G4 MIR4672-201ENST00000583126 81 ntBASIC2.92□□□□□ -1.94
PCDHGA9Q9Y5G4 UBL5P2-201ENST00000583788 219 ntBASIC2.92□□□□□ -1.94
PCDHGA9Q9Y5G4 AC240442.1-201ENST00000616055 283 ntBASIC2.92□□□□□ -1.94
PCDHGA9Q9Y5G4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.92□□□□□ -1.94
PCDHGA9Q9Y5G4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.91□□□□□ -1.94
PCDHGA9Q9Y5G4 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.91□□□□□ -1.94
PCDHGA9Q9Y5G4 Y_RNA.458-201ENST00000384240 102 ntBASIC2.91□□□□□ -1.94
PCDHGA9Q9Y5G4 AL357139.1-201ENST00000407792 426 ntBASIC2.91□□□□□ -1.94
PCDHGA9Q9Y5G4 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.91□□□□□ -1.94
PCDHGA9Q9Y5G4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.91□□□□□ -1.94
PCDHGA9Q9Y5G4 AC104389.3-201ENST00000445629 235 ntBASIC2.91□□□□□ -1.94
PCDHGA9Q9Y5G4 IFNA11P-201ENST00000446352 526 ntBASIC2.91□□□□□ -1.94
PCDHGA9Q9Y5G4 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.91□□□□□ -1.94
PCDHGA9Q9Y5G4 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.91□□□□□ -1.94
PCDHGA9Q9Y5G4 AC067942.3-201ENST00000512025 362 ntBASIC2.91□□□□□ -1.94
PCDHGA9Q9Y5G4 SNORA40.15-201ENST00000516884 107 ntBASIC2.91□□□□□ -1.94
PCDHGA9Q9Y5G4 AL117187.1-201ENST00000555482 181 ntBASIC2.91□□□□□ -1.94
PCDHGA9Q9Y5G4 AC233702.2-202ENST00000562547 291 ntBASIC2.91□□□□□ -1.94
PCDHGA9Q9Y5G4 AC068205.3-201ENST00000636385 468 ntBASIC2.91□□□□□ -1.94
PCDHGA9Q9Y5G4 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
PCDHGA9Q9Y5G4 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PCDHGA9Q9Y5G4 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PCDHGA9Q9Y5G4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.94
PCDHGA9Q9Y5G4 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
PCDHGA9Q9Y5G4 RNA5SP361-201ENST00000362686 118 ntBASIC2.9□□□□□ -1.95
PCDHGA9Q9Y5G4 Y_RNA.176-201ENST00000363815 109 ntBASIC2.9□□□□□ -1.95
PCDHGA9Q9Y5G4 Y_RNA.183-201ENST00000363882 113 ntBASIC2.9□□□□□ -1.95
PCDHGA9Q9Y5G4 RNU6-1310P-201ENST00000384153 107 ntBASIC2.9□□□□□ -1.95
PCDHGA9Q9Y5G4 RNU6-708P-201ENST00000384217 107 ntBASIC2.9□□□□□ -1.95
PCDHGA9Q9Y5G4 SNORD15B-201ENST00000384714 146 ntBASIC2.9□□□□□ -1.95
PCDHGA9Q9Y5G4 AL033519.2-201ENST00000403958 392 ntBASIC2.9□□□□□ -1.95
PCDHGA9Q9Y5G4 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.9□□□□□ -1.95
PCDHGA9Q9Y5G4 AL445305.1-201ENST00000432577 575 ntBASIC2.9□□□□□ -1.95
PCDHGA9Q9Y5G4 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.9□□□□□ -1.95
PCDHGA9Q9Y5G4 RPEP5-201ENST00000441137 268 ntBASIC2.9□□□□□ -1.95
PCDHGA9Q9Y5G4 UQCRBP2-201ENST00000447827 297 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 163 ms