Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SDAD1P3-201ENST00000427380 333 ntBASIC3□□□□□ -1.93
PCDHB1Q9Y5F3 AC022018.1-201ENST00000430685 241 ntBASIC3□□□□□ -1.93
PCDHB1Q9Y5F3 RPS15AP7-201ENST00000439294 405 ntBASIC3□□□□□ -1.93
PCDHB1Q9Y5F3 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3□□□□□ -1.93
PCDHB1Q9Y5F3 RN7SL75P-201ENST00000461926 281 ntBASIC3□□□□□ -1.93
PCDHB1Q9Y5F3 AC073901.1-201ENST00000462471 408 ntBASIC3□□□□□ -1.93
PCDHB1Q9Y5F3 RPS29P26-201ENST00000477483 171 ntBASIC3□□□□□ -1.93
PCDHB1Q9Y5F3 AC098869.1-201ENST00000481627 292 ntBASIC3□□□□□ -1.93
PCDHB1Q9Y5F3 RN7SL633P-201ENST00000488974 297 ntBASIC3□□□□□ -1.93
PCDHB1Q9Y5F3 AC145146.1-201ENST00000496370 254 ntBASIC3□□□□□ -1.93
PCDHB1Q9Y5F3 RNU6-408P-201ENST00000515910 100 ntBASIC3□□□□□ -1.93
PCDHB1Q9Y5F3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3□□□□□ -1.93
PCDHB1Q9Y5F3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3□□□□□ -1.93
PCDHB1Q9Y5F3 AC010620.2-201ENST00000600135 313 ntBASIC3□□□□□ -1.93
PCDHB1Q9Y5F3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3□□□□□ -1.93
PCDHB1Q9Y5F3 AC000403.1-201ENST00000613696 3585 ntBASIC3□□□□□ -1.93
PCDHB1Q9Y5F3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
PCDHB1Q9Y5F3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3□□□□□ -1.93
PCDHB1Q9Y5F3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.99□□□□□ -1.93
PCDHB1Q9Y5F3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
PCDHB1Q9Y5F3 RNU6-1301P-201ENST00000362724 104 ntBASIC2.99□□□□□ -1.93
PCDHB1Q9Y5F3 RNU6-245P-201ENST00000384020 107 ntBASIC2.99□□□□□ -1.93
PCDHB1Q9Y5F3 RNU6-281P-201ENST00000384212 103 ntBASIC2.99□□□□□ -1.93
PCDHB1Q9Y5F3 RNU6-378P-201ENST00000384324 107 ntBASIC2.99□□□□□ -1.93
PCDHB1Q9Y5F3 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.99□□□□□ -1.93
PCDHB1Q9Y5F3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.99□□□□□ -1.93
PCDHB1Q9Y5F3 RPEP5-201ENST00000441137 268 ntBASIC2.99□□□□□ -1.93
PCDHB1Q9Y5F3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.99□□□□□ -1.93
PCDHB1Q9Y5F3 AC010469.2-201ENST00000496412 480 ntBASIC2.99□□□□□ -1.93
PCDHB1Q9Y5F3 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.99□□□□□ -1.93
PCDHB1Q9Y5F3 AC026470.2-201ENST00000561492 181 ntBASIC2.99□□□□□ -1.93
PCDHB1Q9Y5F3 MIR5695-201ENST00000579717 85 ntBASIC2.99□□□□□ -1.93
PCDHB1Q9Y5F3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
PCDHB1Q9Y5F3 AC013412.1-201ENST00000610687 192 ntBASIC2.99□□□□□ -1.93
PCDHB1Q9Y5F3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.99□□□□□ -1.93
PCDHB1Q9Y5F3 AC010615.1-201ENST00000594254 1764 ntBASIC2.99□□□□□ -1.93
PCDHB1Q9Y5F3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.99□□□□□ -1.93
PCDHB1Q9Y5F3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
PCDHB1Q9Y5F3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
PCDHB1Q9Y5F3 AL355596.1-201ENST00000565399 3996 ntBASIC2.98□□□□□ -1.93
PCDHB1Q9Y5F3 snoU2_19.1-201ENST00000362361 80 ntBASIC2.98□□□□□ -1.93
PCDHB1Q9Y5F3 Y_RNA.60-201ENST00000362831 98 ntBASIC2.98□□□□□ -1.93
PCDHB1Q9Y5F3 RNU6-770P-201ENST00000363929 105 ntBASIC2.98□□□□□ -1.93
PCDHB1Q9Y5F3 Y_RNA.276-201ENST00000364732 109 ntBASIC2.98□□□□□ -1.93
PCDHB1Q9Y5F3 Y_RNA.288-201ENST00000364854 92 ntBASIC2.98□□□□□ -1.93
PCDHB1Q9Y5F3 SNORD78.2-201ENST00000391076 69 ntBASIC2.98□□□□□ -1.93
PCDHB1Q9Y5F3 RN7SKP220-201ENST00000410611 288 ntBASIC2.98□□□□□ -1.93
PCDHB1Q9Y5F3 AL139132.1-201ENST00000431587 344 ntBASIC2.98□□□□□ -1.93
PCDHB1Q9Y5F3 AC112220.1-201ENST00000434628 355 ntBASIC2.98□□□□□ -1.93
PCDHB1Q9Y5F3 FCF1P4-201ENST00000448326 183 ntBASIC2.98□□□□□ -1.93
PCDHB1Q9Y5F3 LINC01399-202ENST00000458450 244 ntBASIC2.98□□□□□ -1.93
PCDHB1Q9Y5F3 SNORD127-201ENST00000458892 86 ntBASIC2.98□□□□□ -1.93
PCDHB1Q9Y5F3 RNU6-1132P-201ENST00000459214 107 ntBASIC2.98□□□□□ -1.93
PCDHB1Q9Y5F3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.98□□□□□ -1.93
PCDHB1Q9Y5F3 CYCSP23-201ENST00000519781 313 ntBASIC2.98□□□□□ -1.93
PCDHB1Q9Y5F3 MIR3128-201ENST00000581957 66 ntBASIC2.98□□□□□ -1.93
PCDHB1Q9Y5F3 RPL17P51-201ENST00000605218 238 ntBASIC2.98□□□□□ -1.93
PCDHB1Q9Y5F3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.98□□□□□ -1.93
PCDHB1Q9Y5F3 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.98□□□□□ -1.93
PCDHB1Q9Y5F3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PCDHB1Q9Y5F3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.98□□□□□ -1.93
PCDHB1Q9Y5F3 AC093831.2-201ENST00000624393 3427 ntBASIC2.97□□□□□ -1.93
PCDHB1Q9Y5F3 ZNF204P-201ENST00000416749 2397 ntBASIC2.97□□□□□ -1.93
PCDHB1Q9Y5F3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PCDHB1Q9Y5F3 MIR487A-201ENST00000385009 80 ntBASIC2.97□□□□□ -1.93
PCDHB1Q9Y5F3 RNU6-1328P-201ENST00000410938 106 ntBASIC2.97□□□□□ -1.93
PCDHB1Q9Y5F3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.97□□□□□ -1.93
PCDHB1Q9Y5F3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.97□□□□□ -1.93
PCDHB1Q9Y5F3 RPL23AP58-201ENST00000440453 469 ntBASIC2.97□□□□□ -1.93
PCDHB1Q9Y5F3 AC080013.2-201ENST00000460866 323 ntBASIC2.97□□□□□ -1.93
PCDHB1Q9Y5F3 AC140059.1-201ENST00000489238 361 ntBASIC2.97□□□□□ -1.93
PCDHB1Q9Y5F3 RN7SKP49-201ENST00000516675 260 ntBASIC2.97□□□□□ -1.93
PCDHB1Q9Y5F3 SNORA40.15-201ENST00000516884 107 ntBASIC2.97□□□□□ -1.93
PCDHB1Q9Y5F3 SNORA31.26-201ENST00000517250 137 ntBASIC2.97□□□□□ -1.93
PCDHB1Q9Y5F3 AC093023.1-201ENST00000547375 507 ntBASIC2.97□□□□□ -1.93
PCDHB1Q9Y5F3 AC107016.2-201ENST00000547968 190 ntBASIC2.97□□□□□ -1.93
PCDHB1Q9Y5F3 UBL5P4-201ENST00000562584 236 ntBASIC2.97□□□□□ -1.93
PCDHB1Q9Y5F3 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.97□□□□□ -1.93
PCDHB1Q9Y5F3 AC011373.1-201ENST00000607270 237 ntBASIC2.97□□□□□ -1.93
PCDHB1Q9Y5F3 AC069294.1-201ENST00000608397 350 ntBASIC2.97□□□□□ -1.93
PCDHB1Q9Y5F3 AC130454.1-201ENST00000622948 401 ntBASIC2.97□□□□□ -1.93
PCDHB1Q9Y5F3 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.97□□□□□ -1.93
PCDHB1Q9Y5F3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.97□□□□□ -1.93
PCDHB1Q9Y5F3 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.97□□□□□ -1.93
PCDHB1Q9Y5F3 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.96□□□□□ -1.94
PCDHB1Q9Y5F3 RNU6-611P-201ENST00000384276 104 ntBASIC2.96□□□□□ -1.94
PCDHB1Q9Y5F3 MIR215-201ENST00000384858 110 ntBASIC2.96□□□□□ -1.94
PCDHB1Q9Y5F3 MIR1302-6-201ENST00000408466 90 ntBASIC2.96□□□□□ -1.94
PCDHB1Q9Y5F3 RPL30P4-201ENST00000429309 333 ntBASIC2.96□□□□□ -1.94
PCDHB1Q9Y5F3 AC009969.1-201ENST00000438726 172 ntBASIC2.96□□□□□ -1.94
PCDHB1Q9Y5F3 Z98949.2-201ENST00000440996 144 ntBASIC2.96□□□□□ -1.94
PCDHB1Q9Y5F3 AL135938.1-201ENST00000443141 297 ntBASIC2.96□□□□□ -1.94
PCDHB1Q9Y5F3 AC117440.1-201ENST00000474107 571 ntBASIC2.96□□□□□ -1.94
PCDHB1Q9Y5F3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.96□□□□□ -1.94
PCDHB1Q9Y5F3 SNORA25.14-201ENST00000516481 132 ntBASIC2.96□□□□□ -1.94
PCDHB1Q9Y5F3 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.96□□□□□ -1.94
PCDHB1Q9Y5F3 MIR3162-201ENST00000581818 82 ntBASIC2.96□□□□□ -1.94
PCDHB1Q9Y5F3 MIR3199-1-201ENST00000582434 88 ntBASIC2.96□□□□□ -1.94
PCDHB1Q9Y5F3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.96□□□□□ -1.94
PCDHB1Q9Y5F3 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms