Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 AL133393.1-201ENST00000603277 287 ntBASIC3.24□□□□□ -1.89
SF3B6Q9Y3B4 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
SF3B6Q9Y3B4 U6.98-201ENST00000637157 84 ntBASIC3.24□□□□□ -1.89
SF3B6Q9Y3B4 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SF3B6Q9Y3B4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SF3B6Q9Y3B4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.23□□□□□ -1.89
SF3B6Q9Y3B4 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
SF3B6Q9Y3B4 Y_RNA.7-201ENST00000362352 102 ntBASIC3.23□□□□□ -1.89
SF3B6Q9Y3B4 Y_RNA.238-201ENST00000364441 102 ntBASIC3.23□□□□□ -1.89
SF3B6Q9Y3B4 RNU4-17P-201ENST00000365598 141 ntBASIC3.23□□□□□ -1.89
SF3B6Q9Y3B4 MIR218-1-201ENST00000384999 110 ntBASIC3.23□□□□□ -1.89
SF3B6Q9Y3B4 MIR591-201ENST00000385290 95 ntBASIC3.23□□□□□ -1.89
SF3B6Q9Y3B4 MTCO2P33-201ENST00000402100 465 ntBASIC3.23□□□□□ -1.89
SF3B6Q9Y3B4 AL139095.1-201ENST00000404326 391 ntBASIC3.23□□□□□ -1.89
SF3B6Q9Y3B4 MIR1294-201ENST00000408503 142 ntBASIC3.23□□□□□ -1.89
SF3B6Q9Y3B4 MIR1185-2-201ENST00000408687 86 ntBASIC3.23□□□□□ -1.89
SF3B6Q9Y3B4 RNU6-710P-201ENST00000410424 105 ntBASIC3.23□□□□□ -1.89
SF3B6Q9Y3B4 RNU5E-9P-201ENST00000411164 104 ntBASIC3.23□□□□□ -1.89
SF3B6Q9Y3B4 AL139281.1-201ENST00000422120 335 ntBASIC3.23□□□□□ -1.89
SF3B6Q9Y3B4 RPL30P4-201ENST00000429309 333 ntBASIC3.23□□□□□ -1.89
SF3B6Q9Y3B4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SF3B6Q9Y3B4 AC021205.2-201ENST00000480069 347 ntBASIC3.23□□□□□ -1.89
SF3B6Q9Y3B4 RNU7-200P-201ENST00000516105 62 ntBASIC3.23□□□□□ -1.89
SF3B6Q9Y3B4 AC100767.1-201ENST00000528178 123 ntBASIC3.23□□□□□ -1.89
SF3B6Q9Y3B4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.23□□□□□ -1.89
SF3B6Q9Y3B4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.23□□□□□ -1.89
SF3B6Q9Y3B4 AL713866.2-201ENST00000603579 219 ntBASIC3.23□□□□□ -1.89
SF3B6Q9Y3B4 AL078604.3-201ENST00000615580 211 ntBASIC3.23□□□□□ -1.89
SF3B6Q9Y3B4 AC013791.1-201ENST00000616619 62 ntBASIC3.23□□□□□ -1.89
SF3B6Q9Y3B4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SF3B6Q9Y3B4 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SF3B6Q9Y3B4 AL049781.1-201ENST00000623195 3585 ntBASIC3.23□□□□□ -1.89
SF3B6Q9Y3B4 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SF3B6Q9Y3B4 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
SF3B6Q9Y3B4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SF3B6Q9Y3B4 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
SF3B6Q9Y3B4 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.23□□□□□ -1.89
SF3B6Q9Y3B4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SF3B6Q9Y3B4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SF3B6Q9Y3B4 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SF3B6Q9Y3B4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
SF3B6Q9Y3B4 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SF3B6Q9Y3B4 RNU4-10P-201ENST00000364383 140 ntBASIC3.22□□□□□ -1.89
SF3B6Q9Y3B4 Y_RNA.287-201ENST00000364853 94 ntBASIC3.22□□□□□ -1.89
SF3B6Q9Y3B4 Y_RNA.361-201ENST00000365515 120 ntBASIC3.22□□□□□ -1.89
SF3B6Q9Y3B4 SNORA72.4-201ENST00000384174 132 ntBASIC3.22□□□□□ -1.89
SF3B6Q9Y3B4 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SF3B6Q9Y3B4 SNORA3.3-201ENST00000408712 125 ntBASIC3.22□□□□□ -1.89
SF3B6Q9Y3B4 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.22□□□□□ -1.89
SF3B6Q9Y3B4 RN7SL442P-201ENST00000473804 320 ntBASIC3.22□□□□□ -1.89
SF3B6Q9Y3B4 ATP5EP1-201ENST00000510257 156 ntBASIC3.22□□□□□ -1.89
SF3B6Q9Y3B4 RNA5SP164-201ENST00000516533 110 ntBASIC3.22□□□□□ -1.89
SF3B6Q9Y3B4 RNU6-579P-201ENST00000516879 102 ntBASIC3.22□□□□□ -1.89
SF3B6Q9Y3B4 MIR2276-201ENST00000516886 89 ntBASIC3.22□□□□□ -1.89
SF3B6Q9Y3B4 SCARNA11.3-201ENST00000517276 130 ntBASIC3.22□□□□□ -1.89
SF3B6Q9Y3B4 AC022695.1-201ENST00000522089 237 ntBASIC3.22□□□□□ -1.89
SF3B6Q9Y3B4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.22□□□□□ -1.89
SF3B6Q9Y3B4 CYCSP30-201ENST00000546447 172 ntBASIC3.22□□□□□ -1.89
SF3B6Q9Y3B4 XIST_intron.1-201ENST00000619444 68 ntBASIC3.22□□□□□ -1.89
SF3B6Q9Y3B4 MIR7515-201ENST00000637837 67 ntBASIC3.22□□□□□ -1.89
SF3B6Q9Y3B4 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SF3B6Q9Y3B4 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SF3B6Q9Y3B4 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SF3B6Q9Y3B4 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.22□□□□□ -1.89
SF3B6Q9Y3B4 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
SF3B6Q9Y3B4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
SF3B6Q9Y3B4 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.21□□□□□ -1.9
SF3B6Q9Y3B4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SF3B6Q9Y3B4 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SF3B6Q9Y3B4 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SF3B6Q9Y3B4 Y_RNA.182-201ENST00000363880 111 ntBASIC3.21□□□□□ -1.9
SF3B6Q9Y3B4 Y_RNA.341-201ENST00000365341 102 ntBASIC3.21□□□□□ -1.9
SF3B6Q9Y3B4 SNORD14D-201ENST00000384390 87 ntBASIC3.21□□□□□ -1.9
SF3B6Q9Y3B4 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.21□□□□□ -1.9
SF3B6Q9Y3B4 MIR1283-1-201ENST00000408494 87 ntBASIC3.21□□□□□ -1.9
SF3B6Q9Y3B4 U3.39-201ENST00000408569 239 ntBASIC3.21□□□□□ -1.9
SF3B6Q9Y3B4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.21□□□□□ -1.9
SF3B6Q9Y3B4 RNU7-170P-201ENST00000459303 61 ntBASIC3.21□□□□□ -1.9
SF3B6Q9Y3B4 AC083906.5-201ENST00000503722 328 ntBASIC3.21□□□□□ -1.9
SF3B6Q9Y3B4 AC026333.2-201ENST00000542164 106 ntBASIC3.21□□□□□ -1.9
SF3B6Q9Y3B4 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.21□□□□□ -1.9
SF3B6Q9Y3B4 AL354798.1-201ENST00000622505 329 ntBASIC3.21□□□□□ -1.9
SF3B6Q9Y3B4 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.21□□□□□ -1.9
SF3B6Q9Y3B4 MIR7153-201ENST00000637758 57 ntBASIC3.21□□□□□ -1.9
SF3B6Q9Y3B4 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
SF3B6Q9Y3B4 AL513302.2-201ENST00000562313 1842 ntBASIC3.21□□□□□ -1.9
SF3B6Q9Y3B4 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.21□□□□□ -1.9
SF3B6Q9Y3B4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.2□□□□□ -1.9
SF3B6Q9Y3B4 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SF3B6Q9Y3B4 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SF3B6Q9Y3B4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
SF3B6Q9Y3B4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SF3B6Q9Y3B4 Y_RNA.124-201ENST00000363339 93 ntBASIC3.2□□□□□ -1.9
SF3B6Q9Y3B4 RNA5SP139-201ENST00000364340 117 ntBASIC3.2□□□□□ -1.9
SF3B6Q9Y3B4 Y_RNA.293-201ENST00000364908 93 ntBASIC3.2□□□□□ -1.9
SF3B6Q9Y3B4 RNU6-234P-201ENST00000365229 104 ntBASIC3.2□□□□□ -1.9
SF3B6Q9Y3B4 Y_RNA.368-201ENST00000365547 113 ntBASIC3.2□□□□□ -1.9
SF3B6Q9Y3B4 RNY1P5-201ENST00000383890 115 ntBASIC3.2□□□□□ -1.9
SF3B6Q9Y3B4 Y_RNA.412-201ENST00000384001 104 ntBASIC3.2□□□□□ -1.9
SF3B6Q9Y3B4 Y_RNA.441-201ENST00000384123 112 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 164.4 ms