Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 Z99497.1-201ENST00000421282 135 ntBASIC0.61□□□□□ -2.31
HHLA3Q9XRX5 AC010099.3-201ENST00000423896 409 ntBASIC0.61□□□□□ -2.31
HHLA3Q9XRX5 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.61□□□□□ -2.31
HHLA3Q9XRX5 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.61□□□□□ -2.31
HHLA3Q9XRX5 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.61□□□□□ -2.31
HHLA3Q9XRX5 RPS4XP11-201ENST00000446897 772 ntBASIC0.61□□□□□ -2.31
HHLA3Q9XRX5 SNORD11.1-201ENST00000459482 85 ntBASIC0.61□□□□□ -2.31
HHLA3Q9XRX5 MIR4753-201ENST00000585119 83 ntBASIC0.61□□□□□ -2.31
HHLA3Q9XRX5 AL929325.1-201ENST00000603096 117 ntBASIC0.61□□□□□ -2.31
HHLA3Q9XRX5 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.61□□□□□ -2.31
HHLA3Q9XRX5 AC016727.2-201ENST00000603988 621 ntBASIC0.61□□□□□ -2.31
HHLA3Q9XRX5 MIR98-201ENST00000606724 119 ntBASIC0.61□□□□□ -2.31
HHLA3Q9XRX5 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.61□□□□□ -2.31
HHLA3Q9XRX5 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.6□□□□□ -2.31
HHLA3Q9XRX5 SNORD114-2-201ENST00000363953 78 ntBASIC0.6□□□□□ -2.31
HHLA3Q9XRX5 SNORA72.2-201ENST00000365028 127 ntBASIC0.6□□□□□ -2.31
HHLA3Q9XRX5 RNU1-36P-201ENST00000365130 165 ntBASIC0.6□□□□□ -2.31
HHLA3Q9XRX5 RNU4-48P-201ENST00000365559 182 ntBASIC0.6□□□□□ -2.31
HHLA3Q9XRX5 RNU6-975P-201ENST00000384296 105 ntBASIC0.6□□□□□ -2.31
HHLA3Q9XRX5 RNU6-1235P-201ENST00000384559 107 ntBASIC0.6□□□□□ -2.31
HHLA3Q9XRX5 RNU6-417P-201ENST00000384712 107 ntBASIC0.6□□□□□ -2.31
HHLA3Q9XRX5 RNA5SP467-201ENST00000391274 118 ntBASIC0.6□□□□□ -2.31
HHLA3Q9XRX5 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.6□□□□□ -2.31
HHLA3Q9XRX5 AC010154.1-201ENST00000425857 269 ntBASIC0.6□□□□□ -2.31
HHLA3Q9XRX5 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.6□□□□□ -2.31
HHLA3Q9XRX5 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.6□□□□□ -2.31
HHLA3Q9XRX5 RNU6-498P-201ENST00000459468 107 ntBASIC0.6□□□□□ -2.31
HHLA3Q9XRX5 RPL39P38-201ENST00000467018 153 ntBASIC0.6□□□□□ -2.31
HHLA3Q9XRX5 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.6□□□□□ -2.31
HHLA3Q9XRX5 RPL39P5-202ENST00000512505 151 ntBASIC0.6□□□□□ -2.31
HHLA3Q9XRX5 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.6□□□□□ -2.31
HHLA3Q9XRX5 RNU6-323P-201ENST00000521915 107 ntBASIC0.6□□□□□ -2.31
HHLA3Q9XRX5 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
HHLA3Q9XRX5 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.6□□□□□ -2.31
HHLA3Q9XRX5 MIR3682-201ENST00000581338 84 ntBASIC0.6□□□□□ -2.31
HHLA3Q9XRX5 AC013244.2-201ENST00000603396 103 ntBASIC0.6□□□□□ -2.31
HHLA3Q9XRX5 AL391646.1-201ENST00000603860 190 ntBASIC0.6□□□□□ -2.31
HHLA3Q9XRX5 AC092354.1-201ENST00000606057 376 ntBASIC0.6□□□□□ -2.31
HHLA3Q9XRX5 AC006566.1-201ENST00000608943 513 ntBASIC0.6□□□□□ -2.31
HHLA3Q9XRX5 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.6□□□□□ -2.31
HHLA3Q9XRX5 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
HHLA3Q9XRX5 RNU6-282P-201ENST00000365357 103 ntBASIC0.59□□□□□ -2.31
HHLA3Q9XRX5 MIR549A-201ENST00000385268 96 ntBASIC0.59□□□□□ -2.31
HHLA3Q9XRX5 RNU11-5P-201ENST00000391216 129 ntBASIC0.59□□□□□ -2.31
HHLA3Q9XRX5 AC004866.1-201ENST00000411748 78 ntBASIC0.59□□□□□ -2.31
HHLA3Q9XRX5 AC004386.2-201ENST00000441858 148 ntBASIC0.59□□□□□ -2.31
HHLA3Q9XRX5 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
HHLA3Q9XRX5 HSPE1P13-201ENST00000451143 297 ntBASIC0.59□□□□□ -2.31
HHLA3Q9XRX5 HSFY5P-201ENST00000453726 309 ntBASIC0.59□□□□□ -2.31
HHLA3Q9XRX5 ACA64.5-201ENST00000516207 127 ntBASIC0.59□□□□□ -2.31
HHLA3Q9XRX5 RNU6-948P-201ENST00000516374 107 ntBASIC0.59□□□□□ -2.31
HHLA3Q9XRX5 SNORA31.10-201ENST00000516482 106 ntBASIC0.59□□□□□ -2.31
HHLA3Q9XRX5 RNU6-1069P-201ENST00000516612 133 ntBASIC0.59□□□□□ -2.31
HHLA3Q9XRX5 RN7SKP49-201ENST00000516675 260 ntBASIC0.59□□□□□ -2.31
HHLA3Q9XRX5 RNA5SP102-201ENST00000516865 106 ntBASIC0.59□□□□□ -2.31
HHLA3Q9XRX5 MTND2P32-201ENST00000521584 1038 ntBASIC0.59□□□□□ -2.31
HHLA3Q9XRX5 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.59□□□□□ -2.31
HHLA3Q9XRX5 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.59□□□□□ -2.31
HHLA3Q9XRX5 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.59□□□□□ -2.31
HHLA3Q9XRX5 AC211469.2-201ENST00000605461 205 ntBASIC0.59□□□□□ -2.31
HHLA3Q9XRX5 RNU6-85P-201ENST00000605989 107 ntBASIC0.59□□□□□ -2.31
HHLA3Q9XRX5 AC005562.2-201ENST00000618264 111 ntBASIC0.59□□□□□ -2.31
HHLA3Q9XRX5 uc_338.11-201ENST00000619132 160 ntBASIC0.59□□□□□ -2.31
HHLA3Q9XRX5 AC006001.4-201ENST00000622243 395 ntBASIC0.59□□□□□ -2.31
HHLA3Q9XRX5 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.59□□□□□ -2.32
HHLA3Q9XRX5 AC009541.1-201ENST00000438279 2662 ntBASIC0.58□□□□□ -2.32
HHLA3Q9XRX5 Y_RNA.399-201ENST00000383955 105 ntBASIC0.58□□□□□ -2.32
HHLA3Q9XRX5 RNU6-1031P-201ENST00000384773 107 ntBASIC0.58□□□□□ -2.32
HHLA3Q9XRX5 MIR19B1-201ENST00000384829 87 ntBASIC0.58□□□□□ -2.32
HHLA3Q9XRX5 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.58□□□□□ -2.32
HHLA3Q9XRX5 HMGN1P14-201ENST00000412459 517 ntBASIC0.58□□□□□ -2.32
HHLA3Q9XRX5 RAB28P5-201ENST00000427490 651 ntBASIC0.58□□□□□ -2.32
HHLA3Q9XRX5 TIMM9P3-201ENST00000428659 274 ntBASIC0.58□□□□□ -2.32
HHLA3Q9XRX5 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.58□□□□□ -2.32
HHLA3Q9XRX5 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.58□□□□□ -2.32
HHLA3Q9XRX5 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.58□□□□□ -2.32
HHLA3Q9XRX5 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.58□□□□□ -2.32
HHLA3Q9XRX5 SCARNA16.2-201ENST00000516520 172 ntBASIC0.58□□□□□ -2.32
HHLA3Q9XRX5 SNORA70.22-201ENST00000517160 124 ntBASIC0.58□□□□□ -2.32
HHLA3Q9XRX5 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.58□□□□□ -2.32
HHLA3Q9XRX5 MIR4698-201ENST00000577795 80 ntBASIC0.58□□□□□ -2.32
HHLA3Q9XRX5 MIR5695-201ENST00000579717 85 ntBASIC0.58□□□□□ -2.32
HHLA3Q9XRX5 MIR5583-1-201ENST00000580941 59 ntBASIC0.58□□□□□ -2.32
HHLA3Q9XRX5 MIR5006-201ENST00000583027 110 ntBASIC0.58□□□□□ -2.32
HHLA3Q9XRX5 FAM71BP1-201ENST00000604431 523 ntBASIC0.58□□□□□ -2.32
HHLA3Q9XRX5 MIR6866-201ENST00000638146 69 ntBASIC0.58□□□□□ -2.32
HHLA3Q9XRX5 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
HHLA3Q9XRX5 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.57□□□□□ -2.32
HHLA3Q9XRX5 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
HHLA3Q9XRX5 RNU6-297P-201ENST00000384636 107 ntBASIC0.57□□□□□ -2.32
HHLA3Q9XRX5 Y_RNA.560-201ENST00000384689 102 ntBASIC0.57□□□□□ -2.32
HHLA3Q9XRX5 SNORD73A-201ENST00000386062 65 ntBASIC0.57□□□□□ -2.32
HHLA3Q9XRX5 SNORA40.3-201ENST00000390964 122 ntBASIC0.57□□□□□ -2.32
HHLA3Q9XRX5 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.57□□□□□ -2.32
HHLA3Q9XRX5 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.57□□□□□ -2.32
HHLA3Q9XRX5 AC114482.1-201ENST00000418010 247 ntBASIC0.57□□□□□ -2.32
HHLA3Q9XRX5 PIGFP2-201ENST00000421400 651 ntBASIC0.57□□□□□ -2.32
HHLA3Q9XRX5 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.57□□□□□ -2.32
HHLA3Q9XRX5 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.57□□□□□ -2.32
HHLA3Q9XRX5 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms