Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 MIR4662B-201ENST00000579498 81 ntBASIC5.36□□□□□ -1.55
PHF8Q9UPP1 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
PHF8Q9UPP1 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
PHF8Q9UPP1 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PHF8Q9UPP1 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PHF8Q9UPP1 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.35□□□□□ -1.55
PHF8Q9UPP1 AC010733.2-201ENST00000589496 5702 ntBASIC5.35□□□□□ -1.55
PHF8Q9UPP1 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
PHF8Q9UPP1 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PHF8Q9UPP1 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
PHF8Q9UPP1 MIR607-201ENST00000385241 96 ntBASIC5.35□□□□□ -1.55
PHF8Q9UPP1 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC5.35□□□□□ -1.55
PHF8Q9UPP1 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC5.35□□□□□ -1.55
PHF8Q9UPP1 COX6CP6-201ENST00000490840 228 ntBASIC5.35□□□□□ -1.55
PHF8Q9UPP1 AC078918.1-201ENST00000498515 228 ntBASIC5.35□□□□□ -1.55
PHF8Q9UPP1 RNU6-113P-201ENST00000516653 101 ntBASIC5.35□□□□□ -1.55
PHF8Q9UPP1 AL442128.1-201ENST00000615151 90 ntBASIC5.35□□□□□ -1.55
PHF8Q9UPP1 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.35□□□□□ -1.55
PHF8Q9UPP1 Six3os1_7.1-201ENST00000621512 201 ntBASIC5.35□□□□□ -1.55
PHF8Q9UPP1 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PHF8Q9UPP1 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PHF8Q9UPP1 AL136964.1-201ENST00000622038 2990 ntBASIC5.34□□□□□ -1.55
PHF8Q9UPP1 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PHF8Q9UPP1 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PHF8Q9UPP1 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
PHF8Q9UPP1 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PHF8Q9UPP1 IL33-202ENST00000417746 2327 ntTSL 2 BASIC5.34□□□□□ -1.55
PHF8Q9UPP1 RNU1-15P-201ENST00000353977 144 ntBASIC5.34□□□□□ -1.55
PHF8Q9UPP1 RNU6-655P-201ENST00000362858 107 ntBASIC5.34□□□□□ -1.55
PHF8Q9UPP1 Y_RNA.220-201ENST00000364244 109 ntBASIC5.34□□□□□ -1.55
PHF8Q9UPP1 RNA5SP51-201ENST00000364750 119 ntBASIC5.34□□□□□ -1.55
PHF8Q9UPP1 Y_RNA.323-201ENST00000365157 109 ntBASIC5.34□□□□□ -1.55
PHF8Q9UPP1 RNU6-820P-201ENST00000384273 107 ntBASIC5.34□□□□□ -1.55
PHF8Q9UPP1 MIR708-201ENST00000390708 88 ntBASIC5.34□□□□□ -1.55
PHF8Q9UPP1 AL353705.1-201ENST00000433468 480 ntBASIC5.34□□□□□ -1.55
PHF8Q9UPP1 AC083863.1-201ENST00000438811 231 ntBASIC5.34□□□□□ -1.55
PHF8Q9UPP1 HIGD1AP1-201ENST00000550979 275 ntBASIC5.34□□□□□ -1.55
PHF8Q9UPP1 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC5.34□□□□□ -1.55
PHF8Q9UPP1 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
PHF8Q9UPP1 AP001273.1-201ENST00000624493 3152 ntBASIC5.34□□□□□ -1.56
PHF8Q9UPP1 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
PHF8Q9UPP1 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
PHF8Q9UPP1 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PHF8Q9UPP1 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC5.33□□□□□ -1.56
PHF8Q9UPP1 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PHF8Q9UPP1 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PHF8Q9UPP1 Y_RNA.111-201ENST00000363248 100 ntBASIC5.33□□□□□ -1.56
PHF8Q9UPP1 RNU4-13P-201ENST00000364019 141 ntBASIC5.33□□□□□ -1.56
PHF8Q9UPP1 RNU6-440P-201ENST00000390882 105 ntBASIC5.33□□□□□ -1.56
PHF8Q9UPP1 CALM2P4-201ENST00000430810 426 ntBASIC5.33□□□□□ -1.56
PHF8Q9UPP1 VDAC1P3-201ENST00000434069 851 ntBASIC5.33□□□□□ -1.56
PHF8Q9UPP1 RPL39P34-201ENST00000477141 156 ntBASIC5.33□□□□□ -1.56
PHF8Q9UPP1 RN7SL271P-201ENST00000487601 295 ntBASIC5.33□□□□□ -1.56
PHF8Q9UPP1 RN7SKP18-201ENST00000516005 275 ntBASIC5.33□□□□□ -1.56
PHF8Q9UPP1 5S_rRNA.13-201ENST00000622298 123 ntBASIC5.33□□□□□ -1.56
PHF8Q9UPP1 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PHF8Q9UPP1 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
PHF8Q9UPP1 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PHF8Q9UPP1 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
PHF8Q9UPP1 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.32□□□□□ -1.56
PHF8Q9UPP1 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC5.32□□□□□ -1.56
PHF8Q9UPP1 Y_RNA.549-201ENST00000384657 102 ntBASIC5.32□□□□□ -1.56
PHF8Q9UPP1 MIR218-2-201ENST00000385006 110 ntBASIC5.32□□□□□ -1.56
PHF8Q9UPP1 AL139095.1-201ENST00000404326 391 ntBASIC5.32□□□□□ -1.56
PHF8Q9UPP1 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC5.32□□□□□ -1.56
PHF8Q9UPP1 RNA5SP20-201ENST00000515976 84 ntBASIC5.32□□□□□ -1.56
PHF8Q9UPP1 RN7SKP12-201ENST00000516275 143 ntBASIC5.32□□□□□ -1.56
PHF8Q9UPP1 RPL23AP91-201ENST00000569211 455 ntBASIC5.32□□□□□ -1.56
PHF8Q9UPP1 HMGN2P15-201ENST00000585707 270 ntBASIC5.32□□□□□ -1.56
PHF8Q9UPP1 RNU1-30P-201ENST00000606575 163 ntBASIC5.32□□□□□ -1.56
PHF8Q9UPP1 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.32□□□□□ -1.56
PHF8Q9UPP1 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PHF8Q9UPP1 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PHF8Q9UPP1 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
PHF8Q9UPP1 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
PHF8Q9UPP1 AL589743.1-201ENST00000551932 2712 ntBASIC5.32□□□□□ -1.56
PHF8Q9UPP1 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
PHF8Q9UPP1 AC007496.3-201ENST00000624987 3443 ntBASIC5.31□□□□□ -1.56
PHF8Q9UPP1 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
PHF8Q9UPP1 SNORD65B-201ENST00000459126 73 ntBASIC5.31□□□□□ -1.56
PHF8Q9UPP1 RN7SL585P-201ENST00000470538 280 ntBASIC5.31□□□□□ -1.56
PHF8Q9UPP1 AC015726.2-201ENST00000620112 122 ntBASIC5.31□□□□□ -1.56
PHF8Q9UPP1 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC5.31□□□□□ -1.56
PHF8Q9UPP1 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PHF8Q9UPP1 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
PHF8Q9UPP1 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PHF8Q9UPP1 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PHF8Q9UPP1 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
PHF8Q9UPP1 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PHF8Q9UPP1 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PHF8Q9UPP1 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PHF8Q9UPP1 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PHF8Q9UPP1 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PHF8Q9UPP1 Y_RNA.203-201ENST00000364106 102 ntBASIC5.3□□□□□ -1.56
PHF8Q9UPP1 RNU6-1138P-201ENST00000365359 106 ntBASIC5.3□□□□□ -1.56
PHF8Q9UPP1 MIR488-201ENST00000365739 83 ntBASIC5.3□□□□□ -1.56
PHF8Q9UPP1 NDUFB4P4-201ENST00000404822 243 ntBASIC5.3□□□□□ -1.56
PHF8Q9UPP1 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC5.3□□□□□ -1.56
PHF8Q9UPP1 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PHF8Q9UPP1 RBMY2UP-201ENST00000453474 324 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms