Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL17A1Q9UMD9 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC4.36□□□□□ -1.71
COL17A1Q9UMD9 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL17A1Q9UMD9 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL17A1Q9UMD9 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
COL17A1Q9UMD9 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
COL17A1Q9UMD9 U8.6-201ENST00000364939 135 ntBASIC4.36□□□□□ -1.71
COL17A1Q9UMD9 Y_RNA.446-201ENST00000384178 104 ntBASIC4.36□□□□□ -1.71
COL17A1Q9UMD9 RNU6-1181P-201ENST00000384191 106 ntBASIC4.36□□□□□ -1.71
COL17A1Q9UMD9 RN7SKP223-201ENST00000410582 62 ntBASIC4.36□□□□□ -1.71
COL17A1Q9UMD9 AC063976.4-201ENST00000421971 163 ntBASIC4.36□□□□□ -1.71
COL17A1Q9UMD9 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.36□□□□□ -1.71
COL17A1Q9UMD9 VWA8P1-201ENST00000510889 176 ntBASIC4.36□□□□□ -1.71
COL17A1Q9UMD9 RNU1-86P-201ENST00000516108 154 ntBASIC4.36□□□□□ -1.71
COL17A1Q9UMD9 SCARNA15.2-201ENST00000516409 127 ntBASIC4.36□□□□□ -1.71
COL17A1Q9UMD9 RNU1-107P-201ENST00000516617 154 ntBASIC4.36□□□□□ -1.71
COL17A1Q9UMD9 AL590705.4-201ENST00000532209 134 ntBASIC4.36□□□□□ -1.71
COL17A1Q9UMD9 MIR8076-201ENST00000611401 83 ntBASIC4.36□□□□□ -1.71
COL17A1Q9UMD9 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC4.36□□□□□ -1.71
COL17A1Q9UMD9 RNU6-37P-201ENST00000362692 107 ntBASIC4.35□□□□□ -1.71
COL17A1Q9UMD9 RNU6-11P-201ENST00000364234 107 ntBASIC4.35□□□□□ -1.71
COL17A1Q9UMD9 RNU6-25P-201ENST00000383873 107 ntBASIC4.35□□□□□ -1.71
COL17A1Q9UMD9 RNU6-1-201ENST00000383898 107 ntBASIC4.35□□□□□ -1.71
COL17A1Q9UMD9 Y_RNA.405-201ENST00000383979 100 ntBASIC4.35□□□□□ -1.71
COL17A1Q9UMD9 RNU6-36P-201ENST00000384172 107 ntBASIC4.35□□□□□ -1.71
COL17A1Q9UMD9 Y_RNA.451-201ENST00000384200 100 ntBASIC4.35□□□□□ -1.71
COL17A1Q9UMD9 RNU6-4P-201ENST00000384205 107 ntBASIC4.35□□□□□ -1.71
COL17A1Q9UMD9 RNU6-5P-201ENST00000384238 107 ntBASIC4.35□□□□□ -1.71
COL17A1Q9UMD9 RNU6-3P-201ENST00000384314 107 ntBASIC4.35□□□□□ -1.71
COL17A1Q9UMD9 RNU6-16P-201ENST00000384385 107 ntBASIC4.35□□□□□ -1.71
COL17A1Q9UMD9 RNU6-15P-201ENST00000384534 107 ntBASIC4.35□□□□□ -1.71
COL17A1Q9UMD9 Y_RNA.524-201ENST00000384564 100 ntBASIC4.35□□□□□ -1.71
COL17A1Q9UMD9 RNU6-2-201ENST00000384627 107 ntBASIC4.35□□□□□ -1.71
COL17A1Q9UMD9 RNU6-29P-201ENST00000384637 107 ntBASIC4.35□□□□□ -1.71
COL17A1Q9UMD9 Y_RNA.561-201ENST00000384694 100 ntBASIC4.35□□□□□ -1.71
COL17A1Q9UMD9 RNU6-9-201ENST00000384776 107 ntBASIC4.35□□□□□ -1.71
COL17A1Q9UMD9 MIR124-3-201ENST00000384866 87 ntBASIC4.35□□□□□ -1.71
COL17A1Q9UMD9 MIR592-201ENST00000384959 97 ntBASIC4.35□□□□□ -1.71
COL17A1Q9UMD9 AL138827.1-201ENST00000402666 306 ntBASIC4.35□□□□□ -1.71
COL17A1Q9UMD9 RNA5SP21-201ENST00000410917 96 ntBASIC4.35□□□□□ -1.71
COL17A1Q9UMD9 HMGN2P3-201ENST00000433603 273 ntBASIC4.35□□□□□ -1.71
COL17A1Q9UMD9 HMGN2P5-201ENST00000436882 273 ntBASIC4.35□□□□□ -1.71
COL17A1Q9UMD9 RNU6-762P-201ENST00000517107 102 ntBASIC4.35□□□□□ -1.71
COL17A1Q9UMD9 RNU6-537P-201ENST00000517277 103 ntBASIC4.35□□□□□ -1.71
COL17A1Q9UMD9 SUMO2P18-201ENST00000518873 252 ntBASIC4.35□□□□□ -1.71
COL17A1Q9UMD9 AC084851.1-201ENST00000529105 249 ntBASIC4.35□□□□□ -1.71
COL17A1Q9UMD9 AC009314.1-201ENST00000603871 304 ntBASIC4.35□□□□□ -1.71
COL17A1Q9UMD9 RNU6-6P-201ENST00000606623 107 ntBASIC4.35□□□□□ -1.71
COL17A1Q9UMD9 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
COL17A1Q9UMD9 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.34□□□□□ -1.71
COL17A1Q9UMD9 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
COL17A1Q9UMD9 MIR410-201ENST00000362222 80 ntBASIC4.34□□□□□ -1.71
COL17A1Q9UMD9 SNORA9.2-201ENST00000365361 133 ntBASIC4.34□□□□□ -1.71
COL17A1Q9UMD9 RNU6-21P-201ENST00000384710 107 ntBASIC4.34□□□□□ -1.71
COL17A1Q9UMD9 AL627311.1-201ENST00000431514 115 ntBASIC4.34□□□□□ -1.71
COL17A1Q9UMD9 RPL23AP58-201ENST00000440453 469 ntBASIC4.34□□□□□ -1.71
COL17A1Q9UMD9 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.34□□□□□ -1.71
COL17A1Q9UMD9 RN7SKP179-201ENST00000516126 217 ntBASIC4.34□□□□□ -1.71
COL17A1Q9UMD9 Y_RNA.677-201ENST00000516401 85 ntBASIC4.34□□□□□ -1.71
COL17A1Q9UMD9 RNU7-110P-201ENST00000516891 62 ntBASIC4.34□□□□□ -1.71
COL17A1Q9UMD9 SNORA31.20-201ENST00000517111 133 ntBASIC4.34□□□□□ -1.71
COL17A1Q9UMD9 RNA5SP290-201ENST00000517133 127 ntBASIC4.34□□□□□ -1.71
COL17A1Q9UMD9 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC4.34□□□□□ -1.71
COL17A1Q9UMD9 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.34□□□□□ -1.71
COL17A1Q9UMD9 AC023043.3-201ENST00000593113 385 ntBASIC4.34□□□□□ -1.71
COL17A1Q9UMD9 AC123912.5-201ENST00000605470 343 ntBASIC4.34□□□□□ -1.71
COL17A1Q9UMD9 MIR1245B-201ENST00000636115 69 ntBASIC4.34□□□□□ -1.71
COL17A1Q9UMD9 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
COL17A1Q9UMD9 RNU6-294P-201ENST00000364999 102 ntBASIC4.33□□□□□ -1.72
COL17A1Q9UMD9 SNORA12.2-201ENST00000391040 156 ntBASIC4.33□□□□□ -1.72
COL17A1Q9UMD9 AC244098.2-201ENST00000422068 99 ntBASIC4.33□□□□□ -1.72
COL17A1Q9UMD9 RPL27AP8-201ENST00000424277 446 ntBASIC4.33□□□□□ -1.72
COL17A1Q9UMD9 MIR2355-201ENST00000517199 87 ntBASIC4.33□□□□□ -1.72
COL17A1Q9UMD9 AC008749.1-201ENST00000597650 306 ntBASIC4.33□□□□□ -1.72
COL17A1Q9UMD9 RNU6-1301P-201ENST00000362724 104 ntBASIC4.32□□□□□ -1.72
COL17A1Q9UMD9 SNORD56.3-201ENST00000363507 71 ntBASIC4.32□□□□□ -1.72
COL17A1Q9UMD9 RNU5E-7P-201ENST00000365290 117 ntBASIC4.32□□□□□ -1.72
COL17A1Q9UMD9 NDUFB4P7-201ENST00000423198 363 ntBASIC4.32□□□□□ -1.72
COL17A1Q9UMD9 MRPS10P1-201ENST00000448483 130 ntBASIC4.32□□□□□ -1.72
COL17A1Q9UMD9 AC074290.1-201ENST00000448883 135 ntBASIC4.32□□□□□ -1.72
COL17A1Q9UMD9 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC4.32□□□□□ -1.72
COL17A1Q9UMD9 RNU6-1231P-201ENST00000517185 103 ntBASIC4.32□□□□□ -1.72
COL17A1Q9UMD9 NDUFA5P6-201ENST00000542110 379 ntBASIC4.32□□□□□ -1.72
COL17A1Q9UMD9 AC055872.1-201ENST00000570978 278 ntBASIC4.32□□□□□ -1.72
COL17A1Q9UMD9 AC008121.1-201ENST00000603244 268 ntBASIC4.32□□□□□ -1.72
COL17A1Q9UMD9 AL360181.4-201ENST00000621752 134 ntBASIC4.32□□□□□ -1.72
COL17A1Q9UMD9 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
COL17A1Q9UMD9 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL17A1Q9UMD9 AC026523.2-201ENST00000625039 7739 ntBASIC4.32□□□□□ -1.72
COL17A1Q9UMD9 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
COL17A1Q9UMD9 MIR450A1-201ENST00000362262 91 ntBASIC4.31□□□□□ -1.72
COL17A1Q9UMD9 RNA5SP173-201ENST00000364857 136 ntBASIC4.31□□□□□ -1.72
COL17A1Q9UMD9 RNU6-827P-201ENST00000365553 106 ntBASIC4.31□□□□□ -1.72
COL17A1Q9UMD9 RNU6-32P-201ENST00000383948 107 ntBASIC4.31□□□□□ -1.72
COL17A1Q9UMD9 RNU6-17P-201ENST00000384245 107 ntBASIC4.31□□□□□ -1.72
COL17A1Q9UMD9 RNU6-13P-201ENST00000384248 107 ntBASIC4.31□□□□□ -1.72
COL17A1Q9UMD9 RNU6-18P-201ENST00000384527 107 ntBASIC4.31□□□□□ -1.72
COL17A1Q9UMD9 RNU6-12P-201ENST00000384604 107 ntBASIC4.31□□□□□ -1.72
COL17A1Q9UMD9 RNU6-41P-201ENST00000384741 107 ntBASIC4.31□□□□□ -1.72
COL17A1Q9UMD9 RNU6ATAC37P-201ENST00000408328 131 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms